GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:58:21

Sequence gi568815596r:80202254_80403819 : 201566 bp : 40.12% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1389   1639  251  1  2   89   44   146 0.682   5.18
 1.02 PlyA +   3099   3104    6                               1.05

 2.02 PlyA -   3219   3214    6                               1.05
 2.01 Sngl -  11576  10683  894  2  0   49   42   323 0.870  19.68
 2.00 Prom -  19611  19572   40                              -2.65

 3.03 PlyA -  20856  20851    6                               1.05
 3.02 Term -  40707  40402  306  0  0  101   55   136 0.772   5.73
 3.01 Init -  41753  41628  126  2  0   77   47   106 0.833   5.70
 3.00 Prom -  43228  43189   40                              -5.75

 4.03 PlyA -  43498  43493    6                               1.05
 4.02 Term -  46891  46774  118  0  1  105   41   142 0.196   8.23
 4.01 Init -  63754  63588  167  1  2   69   95   123 0.408  10.25
 4.00 Prom -  69567  69528   40                              -5.35

 5.00 Prom +  74226  74265   40                              -8.55
 5.01 Sngl +  74284  74490  207  0  0   79   48   264 0.980  16.44
 5.02 PlyA +  78440  78445    6                               1.05

 6.00 Prom +  81245  81284   40                              -3.75
 6.01 Init +  82845  82955  111  2  0   19   81   141 0.506   6.76
 6.02 Intr +  89453  89660  208  1  1   30   70   140 0.252   4.13
 6.03 Term +  89766  89917  152  1  2  110   43    97 0.899   4.49
 6.04 PlyA +  90780  90785    6                               1.05

 7.04 PlyA -  92489  92484    6                               1.05
 7.03 Term -  98655  98476  180  0  0  100   48   121 0.855   5.93
 7.02 Intr - 101456 100004 1453  1  1   70   48  1743 0.870 157.23
 7.01 Init - 102314 102043  272  2  2   46   50   208 0.614   9.30
 7.00 Prom - 107003 106964   40                              -3.95

 8.00 Prom + 110782 110821   40                              -5.15
 8.01 Init + 112390 112515  126  0  0   75   64   119 0.834   8.41
 8.02 Term + 120297 120503  207  2  0   69   54   180 0.128   9.06
 8.03 PlyA + 122413 122418    6                               1.05

 9.04 PlyA - 122519 122514    6                               1.05
 9.03 Term - 124350 124252   99  0  0   93   43    65 0.161  -0.35
 9.02 Intr - 131380 131309   72  1  0   68   98    37 0.334   1.38
 9.01 Init - 143112 142981  132  0  0   59   87   136 0.934  10.79
 9.00 Prom - 166939 166900   40                              -6.15

10.00 Prom + 173829 173868   40                              -4.45
10.01 Init + 178825 179045  221  0  2   70   77   138 0.489   9.05
10.02 Term + 200210 200324  115  2  1   52   49   107 0.002   0.26
10.03 PlyA + 200769 200774    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_1|83_aa
XWFWVSAAFPGAQCKLLVELPLWFLEDGGPLLTAPLGGAPVGTLCGGSNSTFPFRTALAE
VLYEGPTPATNFCLGIQAFSYIL

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_1|252_bp
ngctggttttgggtgtctgcagcttttccaggtgcacagtgcaagctgttggtggagtta
ccactctggtttctggaggatggtggccctcttctcacagctccactaggtggtgcccca
gtagggactctgtgtgggggctccaactccacatttcccttccgcactgccttagcagag
gttctctatgagggtcccacccctgcaacaaacttctgcctgggcatccaggcattttca
tacatcctctga

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_2|297_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSAEYTFFSAPHHTYS
KIDHTVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNCSTTWKLNNVLLNDYWV
HNEMKAEIKMFFETNKNKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKTSRRQEITKIRGEVKEIETQKTLQKINESSSWFFEKINKIDGPLARQIK
KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLCANKLENLEEMDKFLDTYTLP

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_2|894_bp
atgggagactttaacaccccactgtcaacattagacagatcaacaagacagaaagttaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctataga
actctccaccccaaatcagcagaatatacattcttttcagcaccacaccacacttattcc
aaaattgaccacacagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactc
actcaaaactgctcaactacgtggaaactgaacaatgtgctcctgaatgactactgggta
cataatgaaatgaaggcagaaataaaaatgttctttgaaaccaataagaacaaagacaca
acataccagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaaactagcagaaggcaagaaataactaag
atcagaggagaagtgaaggagatagagacacaaaaaacccttcaaaaaatcaatgaatcc
agtagctggttttttgaaaagatcaacaaaattgatgggccgctagcaagacaaataaag
aagaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccact
gatcccacagagatacaaactaccatcagagaatactataaacacctctgtgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacaccctcccatga

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_3|143_aa
MRPRLMQMALQAAALMSPSRNCSKSQPGCGGIGTLSQWEYKMKLFLALCCSLRLSPPVVL
VKTHSLDPGGSIAILLHLAGSLQNEENTPPRVTIKKREQTQAGRGTARARLLFSCPIWIR
EASGEMEPNSEWEMPLFELTLRQ

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_3|432_bp
atgaggccacgtttgatgcagatggccctgcaggctgctgcattgatgtcccctagtaga
aactgcagcaaaagccagccaggatgtggaggaattgggactctcagtcagtgggaatat
aaaatgaaactgtttctggccctttgctgctccctccgcctctctcctccagtggtccta
gtgaaaacccatagcctggaccctggtggcagcatagctattctgctccatctagcagga
tccctgcagaatgaagaaaacacaccacccagagttaccatcaagaagagagaacagacc
caggctggcagaggaacagctcgggccagactgctgttcagctgccctatctggataagg
gaggcatctggggagatggagccaaactctgagtgggaaatgccattgtttgagttgaca
cttagacagtga

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_4|94_aa
MTKSQNQKLCRQFNTSKWPPESAEVKERTFLDLILELLNQMFHVGTKESLVFQVPRLLSV
EIKACCGNETTSSPFLLEEPADDGGEKGTAGSFY

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_4|285_bp
atgaccaaaagtcagaatcagaaactctgccgacagtttaacacatccaaatggccacca
gaatcagctgaagttaaagaacgtacattcctggatctcattctagaactacttaatcag
atgttccatgttgggacaaaagaatctttagttttccaagttcccaggttactctctgta
gaaataaaagcatgctgtggaaatgaaaccacatcatcaccttttcttctggaagagcct
gctgatgatggaggagagaagggcactgcaggctctttctactaa

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_5|68_aa
MVPAPASDEGFNVLSLIAEDEGEKASHGKGKEMREREEEKEEEEEEEEEEEEEEGCARLF
LTTRSHRN

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_5|207_bp
atggtgccagcacctgcttctgatgaaggcttcaatgtactttcactaatagcagaagat
gaaggagagaaggcatcacatggcaaggggaaggaaatgagagaaagagaggaggagaag
gaggaggaggaggaggaagaagaagaagaggaggaggaggagggatgtgccagactcttt
ttaacaaccagatctcacaggaactaa

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_6|156_aa
MSVQLVSHDLASWKLAKPDHDDFSLYHGSRLPSWMKKELTIDSKQLRCGNSFSTSPEGPC
SWLLAFSSYENWKMCVHMATCIPGSGSPGLPDHSGKGKPLKNQNKVSPVLSGIQVFESHP
ITEENGDSLALQDDNPGYTLIQPLPGYVTLFCSSFI

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_6|471_bp
atgtccgtccagctggtcagccatgacctggcttcatggaaactggcaaaaccagaccat
gatgattttagcctttatcatggcagcagactgccatcatggatgaagaaggaattgact
atagatagcaaacagctcagatgtggaaacagtttttccacatcaccagaaggcccttgt
agctggctgctagccttcagctcctatgaaaactggaagatgtgtgtgcacatggccacg
tgtattccaggatcaggttcaccagggctgccagaccacagtggtaaaggcaagccacta
aagaaccagaacaaagtcagcccagtgctttcaggaattcaggtttttgagtctcatcct
atcacagaagaaaatggtgacagcctagctttgcaggatgacaatcctggttacaccctg
attcaaccccttcctggctatgtgaccttgttttgttcatcttttatttag

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_7|634_aa
MAGCFRGVKGGAGQWSFPMTDINQTVRSWGVASPEFGVFSPHNVTVRTAEGKEGGRKAKL
GLRHVVGKLAGPRSRLPALPAALAAPSRAANGCPQLCRCEGRLLYCEALNLTEAPHNLSG
LLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQIT
QLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS
LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA
IVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKSL
TSITLAGNLWDCGRNVCALASWLNNFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCEDG
AEPTSGHLLSAVTNRSDLGPPASSATTLADGGEGQHDGTFEPATVALPGGEHAENAVQIH
KVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQMAAMSAQ
EYYVDYKPNHIEGALVIINEYGSCTCHQQPARECEVSRSIIEISVSIELKSEEVVVVAVG
GCREGKGKAVCIGRRAPSSDDNLSKCMIEINCHG

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_7|1905_bp
atggcaggctgtttccgcggagtaaaaggtggcgccggtcagtggtcgtttccaatgacg
gacattaaccagactgtcagatcctggggagtcgcgagccccgagtttggagttttttcc
ccccacaacgtcacagtccgaactgcagagggaaaggaaggcggcaggaaggcgaagctc
gggctccggcacgtagttgggaaacttgcgggtcctagaagtcgcctccccgccttgccg
gccgcccttgcagccccgagccgagcagcaaacgggtgcccgcagctgtgccggtgcgag
gggcggctgctgtactgcgaggcgctcaacctcaccgaggcgccccacaacctgtccggc
ctgctgggcttgtccctgcgctacaacagcctctcggagctgcgcgccggccagttcacg
gggttaatgcagctcacgtggctctatctggatcacaatcacatctgctccgtgcagggg
gacgcctttcagaaactgcgccgagttaaggaactcacgctgagttccaaccagatcacc
caactgcccaacaccaccttccggcccatgcccaacctgcgcagcgtggacctctcgtac
aacaagctgcaggcgctcgcgcccgacctcttccacgggctgcggaagctcaccacgctg
catatgcgggccaacgccatccagtttgtgcccgtgcgcatcttccaggactgccgcagc
ctcaagtttctcgacatcggatacaatcagctcaagagtctggcgcgcaactctttcgcc
ggcttgtttaagctcaccgagctgcacctcgagcacaacgacttggtcaaggtgaacttc
gcccacttcccgcgcctcatctccctgcactcgctctgcctgcggaggaacaaggtggcc
attgtggtcagctcgctggactgggtttggaacctggagaaaatggacttgtcgggcaac
gagatcgagtacatggagccccatgtgttcgagaccgtgccgcacctgcagtccctgcag
ctggactccaaccgcctcacctacatcgagccccggatcctcaactcttggaagtccctg
acaagcatcaccctggccgggaacctgtgggattgcgggcgcaacgtgtgtgccctagcc
tcgtggctcaacaacttccaggggcgctacgatggcaacttgcagtgcgccagcccggag
tacgcacagggcgaggacgtcctggacgccgtgtacgccttccacctgtgcgaggatggg
gccgagcccaccagcggccacctgctctcggccgtcaccaaccgcagtgatctggggccc
cctgccagctcggccaccacgctcgcggacggcggggaggggcagcacgacggcacattc
gagcctgccaccgtggctcttccaggcggcgagcacgccgagaacgccgtgcagatccac
aaggtggtcacgggcaccatggccctcatcttctccttcctcatcgtggtcctggtgctc
tacgtgtcctggaagtgtttcccagccagcctcaggcagctcagacagtgctttgtcacg
cagcgcaggaagcaaaagcagaaacagaccatgcatcagatggctgccatgtctgcccag
gaatactacgttgattacaaaccgaaccacattgagggagccctggtgatcatcaacgag
tatggctcgtgtacctgccaccagcagcccgcgagggaatgcgaggtttccaggtccatc
attgagatttcagtttctattgaactaaagagtgaggaggtggtggtagtggcagttggt
gggtgcagagaagggaaggggaaggctgtgtgcattggacggagggctccttcatcagat
gacaatttaagcaaatgtatgattgaaataaactgtcatggatga

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_8|110_aa
MSEAAKETCKDDAVCLMVLCQCLAGVECIISEEGLPLAYHINLRDGARRRRPRGPKRQPG
PGADALPRPQPSRRVCCQDDRKRVCGEMGASVALSIIQNPVAFAGSSLSM

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_8|333_bp
atgagtgaagctgcaaaggaaacgtgtaaggatgatgctgtctgcctcatggttctatgt
caatgtctagctggtgttgagtgtatcatttctgaagagggtttgccattggcatatcac
atcaatctccgggacggcgcgcggcggcggaggccgcggggccccaagcgccagcctggc
cccggcgcagatgcgctgccccggccgcagcccagccgccgcgtgtgttgtcaggacgat
cggaaacgcgtgtgtggggagatgggtgccagtgtcgccttgtccattatccaaaaccca
gtcgcttttgctggttcctcactcagcatgtga

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_9|100_aa
MNVSGARAFQTEGPADVNGSEAGTLLRMAMGLVCQELNEEEQWKKKEEKKGGGWLSGLSN
SLTNGIMQAHLDWPSQSDANGVDSIGRGMDPLTHITLSST

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_9|303_bp
atgaatgtcagtggggcaagggccttccagacagaaggacctgcagatgtaaatggctct
gaagcaggaacattgctgagaatggcaatggggctagtgtgccaggagctgaatgaagaa
gagcagtggaagaaaaaagaagaaaaaaaaggtggtggctggctttctggtctgagcaac
tcactgaccaatggtattatgcaggcacacttagattggccttcacagtcagatgctaat
ggagttgattccattggcagagggatggatccacttacccatatcaccctgagcagtaca
taa

>gi568815596r:80202254_80403819|GENSCAN_predicted_peptide_10|111_aa
MLSEVPDSPKPEECQWLAPSCSGGGSLLGVGAGVGGSLAFPQLGDQFEKSRKSTELDKLH
PKQAKDSISGLTISLDPGAIQEPIKNCLIRIKDAVTQEISVALEAVSNVTT

>gi568815596r:80202254_80403819|GENSCAN_predicted_CDS_10|336_bp
atgctcagtgaggtccctgattcacctaagcctgaggagtgccagtggcttgcaccttcg
tgttcaggaggtggtagtctcctgggtgttggtgctggggttgggggcagcctggccttc
ccccagcttggagatcagtttgagaagtcgaggaagagcacagagcttgataagcttcac
ccaaagcaagcaaaagacagcataagtgggctaacaataagcctggatcctggggctatc
caggagcccatcaaaaattgcctcattagaataaaagatgctgtcacccaagaaatttca
gtggctttagaagctgtttccaatgttaccacctag