GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:37:33

Sequence gi568815587f:8811450_9019477 : 208028 bp : 43.53% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  16830  17009  180  2  0  101   20   109 0.484   5.46
 1.02 Intr +  17286  17449  164  2  2   45   69   130 0.472   5.57
 1.03 Intr +  26283  26423  141  0  0   40   72   112 0.102   4.27
 1.04 Intr +  36210  36279   70  0  1   56   83    51 0.007   0.58
 1.05 Intr +  56688  56753   66  2  0   54   98    33 0.000   0.00
 1.06 Term +  81248  82180  933  1  0   -8   48   280 0.002   6.53
 1.07 PlyA +  82212  82217    6                               1.05

 2.00 Prom +  83478  83517   40                              -2.46
 2.01 Init + 100001 100222  222  1  0  103   78   136 0.630  12.67
 2.02 Intr + 103377 103481  105  2  0   53  111    41 0.890   3.31
 2.03 Intr + 107888 108025  138  1  0  128  -14   153 0.015   9.76
 2.04 Intr + 114196 114330  135  0  0   94   33    75 0.002   3.36
 2.05 Intr + 120597 120713  117  2  0  105  105    33 0.440   7.36
 2.06 Term + 121329 121403   75  2  0   60   55    71 0.254  -1.16
 2.07 PlyA + 123163 123168    6                               1.05

 3.03 PlyA - 125166 125161    6                              -0.45
 3.02 Term - 126724 126167  558  1  0   73   44   464 0.339  34.85
 3.01 Init - 133940 133710  231  2  0   63   47    86 0.170   0.26
 3.00 Prom - 134430 134391   40                              -5.56

 4.06 PlyA - 134589 134584    6                               1.05
 4.05 Term - 137026 136871  156  1  0   58   32   194 0.992   8.73
 4.04 Intr - 141888 141754  135  0  0   54   98    19 0.525   0.26
 4.03 Intr - 144849 144741  109  2  1   79   93    93 0.884   9.19
 4.02 Intr - 150734 150643   92  2  2   70  111     4 0.831  -0.31
 4.01 Init - 152864 152760  105  2  0   98  113   274 0.999  29.12
 4.00 Prom - 159279 159240   40                              -7.36

 5.09 PlyA - 159323 159318    6                               1.05
 5.08 Term - 161137 161074   64  0  1  102   42    72 0.220   1.36
 5.07 Intr - 172520 172426   95  2  2   43   89   103 0.570   4.66
 5.06 Intr - 172675 172623   53  2  2   88  116    26 0.996   4.03
 5.05 Intr - 174401 174262  140  1  2   45   99   101 0.997   7.01
 5.04 Intr - 176181 176099   83  0  2   88   98    18 0.975   1.24
 5.03 Intr - 176812 176669  144  1  0   55   95   101 0.447   7.98
 5.02 Intr - 192473 192313  161  0  2   34   89   366 0.361  31.01
 5.01 Intr - 193122 192900  223  0  1   68   99   149 0.110  11.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  59616  59505  112  0  1   48   99   145 0.843   9.97
S.002 Term + 107888 108031  144  1  0  128   41   150 0.983  12.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:8811450_9019477|GENSCAN_predicted_peptide_1|517_aa
KCLDTEQCTFNSTTRPLRLHQNSFRSPALGKAKPPAPQDAALLWFVFRGSNAAVSAGKLG
GTLTKQKIPRCFAAVMSEFTQEGKLLQQRKLIRPDKSGEQRWKTGMRQETVEDKKVQEFE
HSHEQNQQSINVELGHVSKHRRSLEATTSKDQSPHDGEIKARMADIDSQGNETDYASAGC
KRNRNSSPVVTPTSSLPSEPSYSLQGTEEVESLNRPITGSEIEAIINSLPTKKSPGPNGF
TVEFYQRYKEELVPFLLKLFQSIEKEGILPNPFYEASIILIPKPGRDTTKKENFRPISLV
NINAKILSKILANRIQQHIEKLIHHDQVGFIPGMQGWFNIRKSINIIQHINRTKDKNHMT
ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRATYDKPTANIILNGQKLEAFPLKTG
TRQGCPLSPLLFNIVLKVLARAIRQEKEINGIQLGKEEVKLSLFADDMIVCLENPIVSAQ
NLLKLISNFSKVSGYKINVQKSQHSYTPITDKQRAKS

>gi568815587f:8811450_9019477|GENSCAN_predicted_CDS_1|1554_bp
aagtgcctggacacagagcagtgcaccttcaacagcacaactcggccgttaaggctgcac
caaaattcattcaggagcccagccctgggcaaagcaaagcctcctgccccccaggatgca
gcacttctctggtttgtcttcaggggctccaatgcagctgtatctgcggggaagctgggg
ggaacactgaccaaacagaagattccacgctgctttgctgcggtcatgtctgagtttacc
caagaggggaagctgctccaacagaggaagttaattagaccagacaagagcggggagcag
aggtggaagacagggatgagacaagaaactgtggaggacaaaaaggtacaagaatttgaa
catagccatgaacagaaccaacaatcaataaatgtagagcttggacatgttagcaaacat
cgaaggtctctggaagctacaacttccaaggaccaatctccgcatgatggagaaatcaaa
gccagaatggctgatattgattctcaaggcaatgaaacagactacgcaagtgctggctgc
aaaagaaacagaaacagcagccccgtggtcactccaactagctctttacccagtgaacca
agctactcgctgcagggtacagaagaagttgaatccctgaatagaccaataacaggctct
gaaattgaggcaataattaatagcttaccaaccaaaaaaagtccaggaccaaatggattc
acagtcgaattctaccagaggtacaaggaggagctggtaccattccttctgaaactattc
caatcaatagaaaaagagggaatcctccctaacccattttatgaggccagcatcattctg
ataccaaagcctggcagagacacaacaaaaaaagagaattttagaccaatatccctagtg
aacatcaatgcaaaaatcctcagtaaaatactggcaaaccgaatccagcagcacatcgaa
aagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacata
cgcaaatcaataaacataatccagcatataaacagaaccaaagacaaaaaccacatgact
atctcaatagatgcagaaaaggcctttgacaaaattcaacagcctttcatgctaaaaact
ctcaataaattaggtattgatgggacgtatctcaaaataataagagctacttatgacaaa
cccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaaccggc
acaagacagggatgccctctctcaccactcctattcaacatagtgttgaaagttctggcc
agggcaatcaggcaggagaaagaaataaatggtattcaattaggaaaagaagaagtcaaa
ttgtccctgtttgcagatgacatgattgtatgtttagaaaaccccatcgtctcagcccaa
aatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcacagcattcttatacaccaataacagacaaacagagagccaaatcatga

>gi568815587f:8811450_9019477|GENSCAN_predicted_peptide_2|263_aa
MDNCLAAAALNGVDRRSLQRSARLALEVLERAKRRAVDWHALERPKGCMGVLAREAPHLE
KQPAAGPQRVLPGEKYYSSVPEEGGATHVYRYHRGESKLHMCLDIGNGQAENISKDLYIE
VYPGTYSVTVGSNDLTKKTHVVAVDSGQSVDLVFPEEDEEEETARGACIATFSSLGPSRG
KSCAVGSNSGSSLAMTSEVLEASLSTKVYHQQPRTKEKEKGIHFPQRGRDRYLARGLCPP
CSEETAATRAQDQAALLQPTRAP

>gi568815587f:8811450_9019477|GENSCAN_predicted_CDS_2|792_bp
atggacaactgtttggcggccgcagcgctgaatggggtggaccgacgttccctgcagcgt
tcagcaaggctggctctagaagtgctggagagggccaagaggagggcggtggactggcat
gccctggagcgtcccaaaggctgcatgggggtccttgcccgggaggcgccccacctagag
aaacagccggcagccggcccgcagcgcgttctcccgggagagaaatattattcatctgtg
ccagaggaaggaggggcaacccatgtctatcgttatcacagaggcgagtcgaagctgcac
atgtgcttggacatagggaatggtcaggctgagaacatctctaaggacctctacatagaa
gtatatccagggacctattctgtcactgtgggctcaaatgacttaaccaagaagactcat
gtggtagcagttgattctggacaaagcgtggacctggtcttccctgaggaggatgaggag
gaagaaacagccaggggagcgtgcattgctactttctcctctttaggaccttccaggggc
aaaagctgtgctgtgggctccaactctggaagttctctggccatgacttctgaggtcctg
gaagcaagtctgtccaccaaggtctaccaccaacagccaagaacaaaggaaaaagaaaag
ggcatccacttcccccagaggggcagagacaggtaccttgcaaggggcttgtgcccgccc
tgttcagaggagacagctgccaccagggcccaagatcaagccgcactgctgcagcccacc
agagccccgtga

>gi568815587f:8811450_9019477|GENSCAN_predicted_peptide_3|262_aa
MGKSPGHLTKEEIQMANKHMKRCSTSYVIREMQTETTMGYQYTPIRMTKIYDTDNTKCSQ
GCGATGTFFYCWWEYKMVKEEMMDNRGNSSLPDKLPIFPDSARLPLTRSFYLEPMVTFHV
HPEAPVSSPYSEELPRLPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRN
ERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKNN
PGKVSSMIATTSHHADPMFRIV

>gi568815587f:8811450_9019477|GENSCAN_predicted_CDS_3|789_bp
atgggcaaaagtcctggacacctcaccaaagaggagatacagatggcaaataagcatatg
aaaagatgttccacatcatatgtcatcagggaaatgcaaactgaaacaacaatgggatac
caatacacacctattagaatgaccaaaatctacgacactgataacaccaaatgctctcaa
ggatgtggagcaacaggaactttcttttattgctggtgggaatacaaaatggttaaagag
gaaatgatggacaacagaggcaactctagtctacctgacaaacttcctatcttccctgat
tctgcccgcttgccactgaccaggtccttctatctggagcccatggtcactttccacgtg
cacccagaggccccggtgtcatccccttactctgaggagctgccacggctgccttttccc
agcgactctcttatcctgggaaattacagtgaaccctgccccttctctttcccgatgcct
tatccaaattacagagggtgcgagtactcctacgggccagccttcacccggaaaaggaat
gagcgggaaaggcagcgggtgaaatgtgtcaatgaaggctacgcccagctccgccatcat
ctgccagaggagtatttggagaagcgactcagcaaagtggaaaccctcagagctgcgatc
aagtacattaactacctgcagtctcttctgtaccctgataaagctgagaccaagaataac
cctggaaaagtttcctccatgatagcaaccaccagccaccatgctgaccctatgttcaga
attgtttga

>gi568815587f:8811450_9019477|GENSCAN_predicted_peptide_4|198_aa
MATLWGGLLRLGSLLSLSCLALSVLLLAQLSDAAKNFEDVRCKCICPPYKENSGHIYNKN
ISQKDCDCLHVVEPMPVRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMV
YLTLVEPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWK
LQVQEQRKSVFDRHVVLS

>gi568815587f:8811450_9019477|GENSCAN_predicted_CDS_4|597_bp
atggcgaccctgtggggaggccttcttcggcttggctccttgctcagcctgtcgtgcctg
gcgctttccgtgctgctgctggcgcagctgtcagacgccgccaagaatttcgaggatgtc
agatgtaaatgtatctgccctccctataaagaaaattctgggcatatttataataagaac
atatctcagaaagattgtgattgccttcatgttgtggagcccatgcctgtgcgggggcct
gatgtagaagcatactgtctacgctgtgaatgcaaatatgaagaaagaagctctgtcaca
atcaaggttaccattataatttatctctccattttgggccttctacttctgtacatggta
tatcttactctggttgagcccatactgaagaggcgcctctttggacatgcacagttgata
cagagtgatgatgatattggggatcaccagccttttgcaaatgcacacgatgtgctagcc
cgctcccgcagtcgagccaacgtgctgaacaaggtagaatatgcacagcagcgctggaag
cttcaagtccaagagcagcgaaagtctgtctttgaccggcatgttgtcctcagctaa

>gi568815587f:8811450_9019477|GENSCAN_predicted_peptide_5|320_aa
SRGPVGGDRPEVGEIRSAPNLGGSRQSSGPGRWTLEPRLAAWRCVSEKPSSGAGGGTRGM
ARLSVIPGSATAWTGLLTEGGRKETDMREAASLRQQRRMKQAVQFIHKDSADLLPLDGLK
KLGSSKDMRRLMETNLSKLRSGPRVPWASKTNKLNQAKSEGLKKSEEDDMILVSCQCAGK
DVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSLPRHLKVVGQIEHLVITLGS
LRLDCPAAVVDDNEKNLSLGLQTLRSLKCIINLDKHRLIMGKTDKEEIPFVETVSLNEDN
PPITGPGDGVDDVLAPHYYF

>gi568815587f:8811450_9019477|GENSCAN_predicted_CDS_5|963_bp
tcacgtggcccggtgggtggggaccgacctgaagttggagaaatccggagcgctcccaac
ctcggagggagtcgccagtcctccgggcccgggcggtggaccctggagccccggctggcg
gcgtggaggtgcgtttctgagaagccgagcagcggcgcgggcggcgggactcgaggcatg
gcccggctgtcggtgatccccgggtcggccacggcgtggacagggctcctcactgagggc
ggccgcaaggagaccgacatgcgggaggcggcgtcactgcgacagcagcgccggatgaag
caggcggtgcagttcatccacaaggactccgccgacctgctgcccctggacggcctcaag
aagctgggctcgtccaaggacatgaggcgcctcatggaaaccaacctgtctaagctccga
agcggtccccgtgtcccttgggcctctaagacgaacaaactcaatcaggctaagtctgag
gggctaaagaagtctgaggaggatgacatgattttggtttcttgccagtgtgctggaaag
gatgtgaaagccttggttgacacaggctgcctatataatctcatctctttggcctgtgtg
gacagattgggactcaaggagcatgtcaaatcccacaagcatgaaggagaaaagctttct
ctaccccggcatctcaaagtagtgggccagattgagcacctagtgatcacactgggctcc
ctccgcctggactgcccagcagctgtggttgatgacaatgagaaaaacttgtcccttggt
ctacagactctccgatctctgaagtgcatcataaacttggataagcaccggctgatcatg
gggaagacagacaaggaagaaatcccttttgtggagacagtctctttgaatgaagacaat
cctcctattactggtcctggagatggggtagatgatgttcttgctcctcattactacttc
tag