Result of FASTA (omim) for pF1KB6926
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6926, 228 aa
  1>>>pF1KB6926 228 - 228 aa - 228 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7835+/-0.000469; mu= 16.9217+/- 0.029
 mean_var=81.5121+/-16.175, 0's: 0 Z-trim(110.5): 460  B-trim: 286 in 1/52
 Lambda= 0.142057
 statistics sampled from 18337 (18864) to 18337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.221), width:  16
 Scan time:  6.060

The best scores are:                                      opt bits E(85289)
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 1491 315.5 4.8e-86
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 1263 268.7 5.6e-72
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 1252 266.4 2.4e-71
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 1155 246.6 2.5e-65
NP_001157462 (OMIM: 609956) ras-related protein Ra ( 186) 1006 216.0 3.5e-56
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256)  970 208.7 7.3e-54
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190)  959 206.3 2.8e-53
XP_011520750 (OMIM: 605455) PREDICTED: ras-related ( 231)  733 160.1 2.8e-39
XP_011520752 (OMIM: 605455) PREDICTED: ras-related ( 140)  680 149.0 3.8e-36
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  646 142.2 6.1e-34
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  633 139.6   4e-33
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  632 139.4 4.5e-33
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  615 135.9 4.9e-32
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  599 132.6 4.8e-31
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  597 132.2 6.4e-31
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  585 129.7 3.5e-30
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  568 126.3   4e-29
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  568 126.3 4.1e-29
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201)  527 117.8 1.3e-26
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  518 116.0   5e-26
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  514 115.2   9e-26
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  514 115.2 9.1e-26
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220)  512 114.8 1.2e-25
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220)  512 114.8 1.2e-25
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219)  508 114.0 2.1e-25
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219)  507 113.8 2.4e-25
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219)  507 113.8 2.4e-25
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203)  500 112.3 6.2e-25
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203)  500 112.3 6.2e-25
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203)  500 112.3 6.2e-25
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203)  500 112.3 6.2e-25
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215)  486 109.5 4.7e-24
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215)  486 109.5 4.7e-24
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215)  486 109.5 4.7e-24
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215)  486 109.5 4.7e-24
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213)  484 109.0 6.2e-24
XP_005251788 (OMIM: 611344) PREDICTED: ras and EF- ( 611)  487 110.1 8.3e-24
XP_005251787 (OMIM: 611344) PREDICTED: ras and EF- ( 717)  487 110.2 9.2e-24
NP_689786 (OMIM: 611344) ras and EF-hand domain-co ( 740)  487 110.2 9.4e-24
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213)  478 107.8 1.4e-23
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188)  476 107.3 1.8e-23
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206)  475 107.2 2.2e-23
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215)  475 107.2 2.2e-23
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218)  473 106.8   3e-23
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216)  470 106.2 4.6e-23
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216)  470 106.2 4.6e-23
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216)  470 106.2 4.6e-23
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216)  470 106.2 4.6e-23
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249)  470 106.2   5e-23
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216)  469 106.0 5.3e-23


>>NP_001157461 (OMIM: 609956) ras-related protein Rab-37  (228 aa)
 initn: 1491 init1: 1491 opt: 1491  Z-score: 1665.7  bits: 315.5 E(85289): 4.8e-86
Smith-Waterman score: 1491; 100.0% identity (100.0% similar) in 228 aa overlap (1-228:1-228)

               10        20        30        40        50        60
pF1KB6 MWLMSEAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWLMSEAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 SGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAK
              130       140       150       160       170       180

              190       200       210       220        
pF1KB6 TGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
              190       200       210       220        

>>NP_001006639 (OMIM: 609956) ras-related protein Rab-37  (223 aa)
 initn: 1252 init1: 1252 opt: 1263  Z-score: 1413.3  bits: 268.7 E(85289): 5.6e-72
Smith-Waterman score: 1263; 97.0% identity (98.0% similar) in 202 aa overlap (29-228:22-223)

               10        20        30          40        50        
pF1KB6 MWLMSEAHGAEPVLLREAARPFTQTLRLCVPSGN--SKVMLLGDTGVGKTCFLIQFKDGA
                                   : :: .  .:::::::::::::::::::::::
NP_001        MTGTPGAVATRDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGA
                      10        20        30        40        50   

       60        70        80        90       100       110        
pF1KB6 FLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDIT
            60        70        80        90       100       110   

      120       130       140       150       160       170        
pF1KB6 NKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETS
           120       130       140       150       160       170   

      180       190       200       210       220        
pF1KB6 AKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
           180       190       200       210       220   

>>NP_001317400 (OMIM: 609956) ras-related protein Rab-37  (196 aa)
 initn: 1252 init1: 1252 opt: 1252  Z-score: 1401.8  bits: 266.4 E(85289): 2.4e-71
Smith-Waterman score: 1252; 100.0% identity (100.0% similar) in 193 aa overlap (36-228:4-196)

          10        20        30        40        50        60     
pF1KB6 EAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
                                     ::::::::::::::::::::::::::::::
NP_001                            MCCKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
                                          10        20        30   

          70        80        90       100       110       120     
pF1KB6 ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
            40        50        60        70        80        90   

         130       140       150       160       170       180     
pF1KB6 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
           100       110       120       130       140       150   

         190       200       210       220        
pF1KB6 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       :::::::::::::::::::::::::::::::::::::::::::
NP_001 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
           160       170       180       190      

>>NP_783865 (OMIM: 609956) ras-related protein Rab-37 is  (216 aa)
 initn: 1155 init1: 1155 opt: 1155  Z-score: 1293.8  bits: 246.6 E(85289): 2.5e-65
Smith-Waterman score: 1155; 91.7% identity (96.4% similar) in 193 aa overlap (36-228:24-216)

          10        20        30        40        50        60     
pF1KB6 EAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
                                     :..:.::.::::: .:.:: .: :. :.: 
NP_783        MDLQRPDSYQGGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFS
                      10        20        30        40        50   

          70        80        90       100       110       120     
pF1KB6 ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
       ::::: : ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_783 ATVGIGFTNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
            60        70        80        90       100       110   

         130       140       150       160       170       180     
pF1KB6 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_783 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
           120       130       140       150       160       170   

         190       200       210       220        
pF1KB6 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       :::::::::::::::::::::::::::::::::::::::::::
NP_783 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
           180       190       200       210      

>>NP_001157462 (OMIM: 609956) ras-related protein Rab-37  (186 aa)
 initn: 1006 init1: 1006 opt: 1006  Z-score: 1129.6  bits: 216.0 E(85289): 3.5e-56
Smith-Waterman score: 1006; 99.4% identity (100.0% similar) in 156 aa overlap (73-228:31-186)

             50        60        70        80        90       100  
pF1KB6 TGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTH
                                     .:::::::::::::::::::::::::::::
NP_001 MTGTPGAVATRDGEAPERSPPCSPSYDLTGKNKVVTVDGVRVKLQIWDTAGQERFRSVTH
               10        20        30        40        50        60

            110       120       130       140       150       160  
pF1KB6 AYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSED
               70        80        90       100       110       120

            170       180       190       200       210       220  
pF1KB6 GETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRS
              130       140       150       160       170       180

             
pF1KB6 SCCSFM
       ::::::
NP_001 SCCSFM
             

>>NP_055168 (OMIM: 605455) ras-related protein Rab-26 is  (256 aa)
 initn: 970 init1: 970 opt: 970  Z-score: 1088.0  bits: 208.7 E(85289): 7.3e-54
Smith-Waterman score: 970; 73.7% identity (92.6% similar) in 190 aa overlap (36-225:65-254)

          10        20        30        40        50        60     
pF1KB6 EAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
                                     ::::.::.::::::.:..:::::::.::::
NP_055 LSGPDAPPNGPLQPGRPSLGGGVDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI
           40        50        60        70        80        90    

          70        80        90       100       110       120     
pF1KB6 ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
       .::::::::::. ::::.::::.::::::::::::::::::::.:::::::.:::.::::
NP_055 STVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDN
          100       110       120       130       140       150    

         130       140       150       160       170       180     
pF1KB6 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
       :.:::::::::::.::..::::::.: . :::.. :::: ::.:::.::.:::::::.::
NP_055 IQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNV
          160       170       180       190       200       210    

         190       200       210       220        
pF1KB6 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       .::: ::::::: :. .  .:: :...:::. . . .:::   
NP_055 DLAFTAIAKELKQRSMKAPSEPRFRLHDYVKREGRGASCCRP 
          220       230       240       250       

>>NP_001294982 (OMIM: 605455) ras-related protein Rab-26  (190 aa)
 initn: 959 init1: 959 opt: 959  Z-score: 1077.4  bits: 206.3 E(85289): 2.8e-53
Smith-Waterman score: 959; 73.4% identity (92.6% similar) in 188 aa overlap (38-225:1-188)

        10        20        30        40        50        60       
pF1KB6 HGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIAT
                                     ::.::.::::::.:..:::::::.::::.:
NP_001                               MLVGDSGVGKTCLLVRFKDGAFLAGTFIST
                                             10        20        30

        70        80        90       100       110       120       
pF1KB6 VGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIR
       :::::::::. ::::.::::.::::::::::::::::::::.:::::::.:::.:::::.
NP_001 VGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQ
               40        50        60        70        80        90

       130       140       150       160       170       180       
pF1KB6 AWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVEL
       :::::::::::.::..::::::.: . :::.. :::: ::.:::.::.:::::::.::.:
NP_001 AWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDL
              100       110       120       130       140       150

       190       200       210       220        
pF1KB6 AFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       :: ::::::: :. .  .:: :...:::. . . .:::   
NP_001 AFTAIAKELKQRSMKAPSEPRFRLHDYVKREGRGASCCRP 
              160       170       180       190 

>>XP_011520750 (OMIM: 605455) PREDICTED: ras-related pro  (231 aa)
 initn: 768 init1: 733 opt: 733  Z-score: 826.1  bits: 160.1 E(85289): 2.8e-39
Smith-Waterman score: 733; 79.7% identity (96.2% similar) in 133 aa overlap (36-168:65-197)

          10        20        30        40        50        60     
pF1KB6 EAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
                                     ::::.::.::::::.:..:::::::.::::
XP_011 LSGPDAPPNGPLQPGRPSLGGGVDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI
           40        50        60        70        80        90    

          70        80        90       100       110       120     
pF1KB6 ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
       .::::::::::. ::::.::::.::::::::::::::::::::.:::::::.:::.::::
XP_011 STVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDN
          100       110       120       130       140       150    

         130       140       150       160       170       180     
pF1KB6 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
       :.:::::::::::.::..::::::.: . :::.. :::: ::.                 
XP_011 IQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKATTWLAAAVYRSMDCPS
          160       170       180       190       200       210    

         190       200       210       220        
pF1KB6 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
                                                  
XP_011 WRPAPRRASTWTWPSQP                          
          220       230                           

>>XP_011520752 (OMIM: 605455) PREDICTED: ras-related pro  (140 aa)
 initn: 680 init1: 680 opt: 680  Z-score: 770.0  bits: 149.0 E(85289): 3.8e-36
Smith-Waterman score: 680; 71.0% identity (90.6% similar) in 138 aa overlap (88-225:1-138)

        60        70        80        90       100       110       
pF1KB6 AFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDI
                                     .::::::::::::::::::::.:::::::.
XP_011                               MWDTAGQERFRSVTHAYYRDAHALLLLYDV
                                             10        20        30

       120       130       140       150       160       170       
pF1KB6 TNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLET
       :::.:::::.:::::::::::.::..::::::.: . :::.. :::: ::.:::.::.::
XP_011 TNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMET
               40        50        60        70        80        90

       180       190       200       210       220        
pF1KB6 SAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
       :::::.::.::: ::::::: :. .  .:: :...:::. . . .:::   
XP_011 SAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFRLHDYVKREGRGASCCRP 
              100       110       120       130       140 

>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H  (207 aa)
 initn: 649 init1: 537 opt: 646  Z-score: 730.3  bits: 142.2 E(85289): 6.1e-34
Smith-Waterman score: 646; 51.6% identity (81.2% similar) in 192 aa overlap (36-223:10-200)

          10        20        30        40        50        60     
pF1KB6 EAHGAEPVLLREAARPFTQTLRLCVPSGNSKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
                                     :..:.::.:::::: :..:.. :: : :::
NP_005                      MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNS-TFI
                                    10        20        30         

          70        80        90       100       110       120     
pF1KB6 ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
       .:.::::. ... .:: :.::::::::::::::..: :::: :....:.:::::..::::
NP_005 STIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDN
       40        50        60        70        80        90        

         130       140       150       160       170       180     
pF1KB6 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
       :: :. .:.:.:. ::  :.:::: :....: . .: :: :: .::. :.:::::...::
NP_005 IRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV
      100       110       120       130       140       150        

         190       200           210       220          
pF1KB6 ELAFLAIAKELKYRAGHQ--ADEP--SFQIRDYVESQKKRSSCCSFM  
       : ::...:...: .  ..  .. :  : :    . .:.::::       
NP_005 ENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKRSSFFRCVLL
      160       170       180       190       200       




228 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:09:01 2016 done: Fri Nov  4 12:09:02 2016
 Total Scan time:  6.060 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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