GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:04:01

Sequence gi568815593f:160099107_160338656 : 239550 bp : 47.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   9508   9439   70  0  1   95   73    18 0.037   0.18
 1.01 Init -  20282  19699  584  2  2   75   81   862 0.788  76.86
 1.00 Prom -  40150  40111   40                              -2.56

 2.00 Prom +  67362  67401   40                              -2.36
 2.01 Init +  72984  72990    7  2  1   48  116     0 0.048  -0.25
 2.02 Term +  86463  86665  203  1  2   55   42   202 0.302   9.85
 2.03 PlyA +  87021  87026    6                               1.05

 3.00 Prom +  90865  90904   40                              -7.66
 3.01 Init +  94781  95376  596  1  2   88   47   310 0.028  19.63
 3.02 Intr +  99943 100051  109  1  1   97   70    97 0.133   9.09
 3.03 Intr + 119154 119237   84  2  0   80  100     7 0.081   1.12
 3.04 Intr + 130440 130518   79  2  1   88   97   124 0.170  12.42
 3.05 Intr + 132992 133167  176  0  2   55  100   268 0.981  24.36
 3.06 Intr + 135714 135803   90  2  0   79  105   121 0.757  13.09
 3.07 Term + 139500 139553   54  2  0  131   47    71 0.929   4.86
 3.08 PlyA + 139590 139595    6                               1.05

 4.09 PlyA - 140105 140100    6                               1.05
 4.08 Term - 154692 154272  421  2  1   96   47   336 0.897  25.06
 4.07 Intr - 156602 156443  160  0  1  100   78    73 0.185   6.55
 4.06 Intr - 160665 160363  303  1  0  132   56   392 0.131  36.96
 4.05 Intr - 170298 170227   72  1  0   75   28    81 0.037   0.18
 4.04 Intr - 170438 170357   82  2  1  113  105    70 0.927  10.41
 4.03 Intr - 173652 173555   98  1  2   49   77    81 0.909   2.83
 4.02 Intr - 181632 181419  214  0  1  134   82   420 0.970  44.29
 4.01 Init - 201034 200891  144  1  0   66   59    61 0.018   1.12
 4.00 Prom - 201737 201698   40                              -3.66

 5.07 PlyA - 202507 202502    6                               1.05
 5.06 Term - 206483 206382  102  2  0   67   45   110 0.772   2.88
 5.05 Intr - 212866 212752  115  0  1   76   86    87 0.982   7.75
 5.04 Intr - 213483 213258  226  1  1   42   66    80 0.016  -1.76
 5.03 Intr - 221479 221327  153  2  0   49   97    36 0.218   0.64
 5.02 Intr - 228457 228321  137  0  2  115   69   105 0.538  11.51
 5.01 Init - 232037 232021   17  2  2   87   89     8 0.214   0.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 130452 130518   67  2  1   91   97   111 0.817  13.53
S.002 Sngl + 159147 159482  336  2  0   91   37   343 0.936  25.53
S.003 Term - 160665 160175  491  1  2  132   42   388 0.865  33.42
S.004 Init - 213514 213258  257  1  2   30   66   171 0.884   3.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:160099107_160338656|GENSCAN_predicted_peptide_1|218_aa
MAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGETDGQQSA
PQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELPPSPASP
PEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDALVVSFRF
GEKLFSGVLMDLSKRDHETYGAIALLLVGKIYSHSGEA

>gi568815593f:160099107_160338656|GENSCAN_predicted_CDS_1|654_bp
atggcggccgtggctgcagaggcggcagcgactgcagcgtcccccggggaggggggcgcc
ggcgaggccgagccggagatggagcccatccccggcagtgaggccggcactgaccccctc
ccggtcacggccactgaagcgtctgtgccggatggcgagactgacgggcagcaatccgct
cctcaggccgacgagccgccgctcccgccgccaccgccgccgccgggggagctcgcccgc
agcccagaggcggtggggccggagctggaggctgaggagaaactgtccgttcgggtggcg
gagtcggcggcagccgcgcctcagggagggccggaacttccaccttctcctgcatcgccg
ccggagcagcccccggctcccgaggagcgcgaggagccgccgctgcctcagcccgtagcc
ccggcgctcgtgccgccggcgggcggggactccacggtgtcgcaactgatcccgggctcg
gaggtgcgggtcacgctggaccacatcattgaggacgcgcttgtcgtgtcgttccgcttc
ggggagaagctcttctccggggtcctcatggatctgtccaaaagagaccatgaaacgtat
ggtgcaatagccctacttttggtgggaaaaatatacagccattctggtgaagca

>gi568815593f:160099107_160338656|GENSCAN_predicted_peptide_2|69_aa
MQAWEGITQEKSVDKEEKQFQDLTWGEHIIFSCQVEEEPVKESEKQQPVRQEENQDISVK
EQKLCKKAF

>gi568815593f:160099107_160338656|GENSCAN_predicted_CDS_2|210_bp
atgcaagcatgggaaggaatcactcaggagaagagcgttgacaaggaagagaagcagttc
caggacctcacctggggggagcacattatattttcttgccaagtagaggaggaacctgtg
aaggagagtgagaagcagcagccagtgaggcaggaggaaaaccaggacatttctgtgaaa
gaacaaaagctttgcaagaaagccttttaa

>gi568815593f:160099107_160338656|GENSCAN_predicted_peptide_3|395_aa
MRSHSSALGRSMGLGAVGQGAALVGEARAAQVPTEAGEGSCMAGCRSRALPHGKAAKARR
EIKRSAGGPALLGDPVHPPQPLAQVLSPSLPGASRAGRLLPVRDPPSPRPPATPAGPQAP
HASARSPSSCSRLSLHTSLQAEGVGSSLGQPRKGLPQCSGGLKGSSSAAKVGAQAEEAPR
VSEGCEDCQHAVISHLRLQLCTSGSRELTGRGWSSPEAMKTVTMMMVVEMQALTQIGTII
IQILQMRKLRHKKINKVPKATEPPPSSMAFTGKFEMESEKNYDEFMKLLGISSDVIEKAR
NFKIVTEVQQDGQDFTWSQHYSGGHTMTNKFTVGKESNIQTMGGKTFKATVQMEGGKLVV
NFPNYHQTSEIVGDKLVEVSTIGGVTYERVSKRLA

>gi568815593f:160099107_160338656|GENSCAN_predicted_CDS_3|1188_bp
atgcgctcgcactcctcagcccttgggcggtcgatgggactgggcgccgtggggcagggg
gcggcgctcgtcggggaggctcgggctgcacaggtgcccacggaggcgggggaaggctcc
tgcatggctggctgcaggtcccgagccctgccccatgggaaggcagctaaggcccggcga
gaaatcaagcgcagcgccggtgggccggcactgctgggggacccagtacaccctccgcag
ccgctggcccaggtgctaagtccctcattgcccggggccagcagggccggccggctgctc
ccagtgcgggacccaccaagcccacgcccaccggcaactccagctggcccgcaagcgccg
cacgcatccgcacgcagccccagttcctgctcgcgcctctccctccacacctccctgcaa
gctgagggagtgggctccagccttggccagcccagaaagggactcccacagtgcagtggt
gggctgaagggctcctcaagtgccgccaaagtgggagcccaggcagaggaggccccgaga
gtgagcgagggctgtgaggactgccagcacgctgttatctctcatttgaggctgcaactt
tgcacctctggctccagggagctcacaggcaggggctggtccagcccagaggcgatgaag
acagtgacgatgatgatggtggtggagatgcaggcgctgactcagataggcaccattatt
atccagattttgcagatgagaaaactgagacacaaaaaaataaataaggtgcccaaggcc
acagaaccacctcccagcagcatggctttcaccggcaagttcgagatggagagtgagaag
aattatgatgagttcatgaagctccttgggatctccagcgatgtaatcgaaaaggcccgc
aacttcaagatcgtcacggaggtgcagcaggatgggcaggacttcacttggtcccagcac
tactccgggggccacaccatgaccaacaagttcactgttggcaaggaaagcaacatacag
acaatggggggcaagacgttcaaggccactgtgcagatggagggcgggaagctggtggtg
aatttccccaactatcaccagacctcagagatcgtgggtgacaagctggtggaggtctcc
accatcggaggcgtgacctatgagcgcgtgagcaagagactggcctaa

>gi568815593f:160099107_160338656|GENSCAN_predicted_peptide_4|497_aa
MDTHAMPPAAKSGSGHQVIWVEGLGGHEEEGEDVIQNRSIGNWIDSVIELKLPTFRAHSP
LLKSRRFFVDILTLLSSHCQLCPAARHLAVYLLDHFMDRYNVTTSKQLYTVAVSCLLLAK
VLTQPTADETRFSVNLTSFVGAFGTVSIGGTVVGTKDQGPQCPHVQRSSAVRPGPEAAPG
DNSYPPYEDRSTCGMQAPDASYSGKFEDREDHVPKLEQINSTRILSSQNFTLTKKELLST
ELLLLEAFSWNLCLPTPAHFLDYYLLASVSQKDHHCHTWPTTCPRKTKECLKEYAHYFLE
VTLQDHIFYKFQPSVVAAACVGASRICLQLSPYWTRDLQRISSYSLEHLSTCIEILLVVY
DNVLKDAVAVKSQALAMVPGTPPTPTQVLFQPPAYPALGQPATTLAQFQTPVQDLCLAYR
DSLQAHRSGSLLSGSTGSSLHTPYQPLQPLDMCPVPVPASLSMHMAIAAEPRHCLATTYG
SSYFSGSHMFPTGCFDR

>gi568815593f:160099107_160338656|GENSCAN_predicted_CDS_4|1494_bp
atggatacccatgccatgccgccagctgctaagtctggaagtggtcatcaagtgatttgg
gtggaagggttggggggacacgaggaggaaggagaggatgtcattcagaacagaagcatc
gggaattggatagattcagttattgaactgaagctgcccaccttccgagcccactcccca
ctcctgaagagccgccggttcttcgtggacatcctgaccctgctgagcagccactgccag
ctctgccctgcagcccggcacctggccgtctacctgctggaccacttcatggatcgctac
aacgtcaccacctccaagcagctctacaccgtggccgtctcctgcctcctgcttgcaaaa
gttttaactcaaccaacagctgatgagacccgtttttccgtaaatttgacttcatttgtg
ggagcctttggaactgttagcattggtggtacagtggtcggaacaaaggatcagggtccc
cagtgcccacacgttcagcgcagcagtgccgtcagacctgggccagaggcagcccctgga
gataactcctatcctccgtacgaggacagaagcacttgtgggatgcaggccccagatgcc
agctattcgggtaagttcgaggatcgggaagaccacgtccccaagttggagcaaataaac
agcacgaggatcctgagcagccagaacttcaccctcaccaagaaggagctgctgagcaca
gagctgctgctcctggaggccttcagctggaacctctgcctgcccacgcctgcccacttc
ctggactactacctcttggcctccgtcagccagaaggaccaccactgccacacctggccc
accacctgcccccgcaagaccaaagagtgcctcaaggagtatgcccattacttcctagag
gtcaccctgcaagatcacatattctacaaattccagccttctgtggtcgctgcggcctgt
gttggggcctccaggatttgcctgcagctttctccctactggaccagagacctgcagagg
atctcaagctattccctggagcacctcagcacgtgtattgaaatcctgctggtagtgtat
gacaacgtcctcaaggatgccgtagccgtcaagagccaggccttggcaatggtgcccggc
acaccccccacccccactcaagtgctgttccagccaccagcctacccggccctcggccag
ccagcgaccaccctggcacagttccagacccccgtgcaggacctatgcttggcctatcgg
gactccttgcaggcccaccgttcagggagcctgctctcggggagtacaggctcatccctc
cacaccccgtaccaaccgctgcagcccttggatatgtgtcccgtgcccgtccctgcatcc
cttagcatgcatatggccattgcagctgagcccaggcactgcctcgccaccacctatgga
agcagctacttcagtgggagccacatgttccccaccggctgctttgacagatag

>gi568815593f:160099107_160338656|GENSCAN_predicted_peptide_5|249_aa
MASDKWLCLPESQTGSSYIAALEKALAAREESKLSPMAVAELSGGPSGCATVLIAPHCFL
ALWLVWTLTVKLRRFFPHKEEYFSPSKFLPKVGEWGKLDQEGPREGGPRRPGACEPRRDP
SARRGAATAGASRAAEAAVGSAERLGRGSNRRQAPEGTAGSALGGARRSQPPTPREDAVR
PESRVASDSGAAYAMMDEPWWEGRVASDVHCTLREKFVFWRSPTDVLSLNHPEKPAAMDV
GLAVGIGKG

>gi568815593f:160099107_160338656|GENSCAN_predicted_CDS_5|750_bp
atggcaagtgataagtggttgtgcttgcctgagagccaaactggttccagctacatcgct
gcattggagaaggctttggcagccagagaagagtcaaagctttcccctatggctgtggct
gaactcagtggtggcccaagtggctgtgcaacagtcctcatcgctccacactgcttcctg
gcactgtggctggtgtggacattgactgtcaaactcaggcggttttttcctcataaagag
gaatacttctctccctccaagtttcttccaaaggttggggagtgggggaagttagaccag
gagggcccgagggagggaggcccccggcggccgggagcctgcgagccgcggcgggacccg
agcgcacgcaggggcgcggcgacggcgggggctagtcgggctgcggaggcggccgtcggg
agtgcggagcgcctcggacgagggtccaaccgccggcaggcaccagagggcacggctggc
tcggcactgggaggggcccggcgctcgcagccccccacgcccagagaggatgcggtgcgc
cctgagagccgggtagcctcggatagcggcgctgcgtacgcgatgatggatgagccgtgg
tgggaagggcgcgtcgcctcggacgtccactgcaccctgcgcgagaagtttgttttctgg
cgctctccaacggatgtgctctctctaaaccatcctgagaagccagccgctatggacgtg
ggccttgctgtgggcattggaaagggctga