GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:23:58

Sequence gi568815585f:33718179_33936292 : 218114 bp : 38.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  10190  10370  181  2  1   56   49   156 0.800   4.60
 1.02 PlyA +  12351  12356    6                               1.05

 2.03 PlyA -  12808  12803    6                               1.05
 2.02 Term -  18657  18357  301  2  1   55   39   249 0.505  10.41
 2.01 Init -  23872  23763  110  1  2   65   46    68 0.030   0.04
 2.00 Prom -  35414  35375   40                              -4.75

 3.00 Prom +  39039  39078   40                              -3.05
 3.01 Init +  43987  43989    3  0  0   77  115     0 0.682   1.65
 3.02 Intr +  49848  49944   97  2  1  100   42    87 0.316   3.96
 3.03 Intr +  51247  51324   78  2  0   87   59    55 0.111   1.10
 3.04 Term +  57686  57795  110  0  2  119   37    66 0.157   2.29
 3.05 PlyA +  57979  57984    6                               1.05

 4.04 PlyA -  58012  58007    6                               1.05
 4.03 Term -  58829  58809   21  2  0  102   49    47 0.557  -0.47
 4.02 Intr -  63689  63453  237  2  0   15   58   175 0.333   4.09
 4.01 Init -  68446  68381   66  1  0   98   97    14 0.660   4.43
 4.00 Prom -  85672  85633   40                              -4.45

 5.00 Prom +  91581  91620   40                              -4.15
 5.01 Init + 100001 100087   87  1  0   84  105   137 0.966  15.69
 5.02 Intr + 102954 103091  138  2  0   98   72    84 0.972   7.54
 5.03 Intr + 105739 105806   68  0  2  129   97     5 0.926   2.28
 5.04 Intr + 113078 113176   99  2  0   96   76    56 0.426   3.51
 5.05 Intr + 116970 117039   70  0  1   57   86    30 0.423  -2.03
 5.06 Term + 117926 118117  192  1  0   70   38   157 0.863   5.34
 5.07 PlyA + 118929 118934    6                               1.05

 6.02 PlyA - 119218 119213    6                               1.05
 6.01 Sngl - 127628 127416  213  2  0   99   48    85 0.295   0.53
 6.00 Prom - 137921 137882   40                               0.45

 7.06 PlyA - 138086 138081    6                               1.05
 7.05 Term - 141892 141762  131  2  2   92   32    99 0.958   2.06
 7.04 Intr - 142471 142283  189  2  0   93   80   121 0.981  10.44
 7.03 Intr - 147273 147180   94  0  1   77   84    10 0.358  -1.88
 7.02 Intr - 151488 151427   62  1  2  120   78    69 0.500   6.63
 7.01 Init - 164762 164720   43  2  1   70  103    32 0.385   3.53
 7.00 Prom - 168941 168902   40                              -3.65

 8.02 PlyA - 169225 169220    6                              -0.45
 8.01 Sngl - 169884 169462  423  0  0   74   32   162 0.604   5.24
 8.00 Prom - 172701 172662   40                              -3.85

 9.00 Prom + 177639 177678   40                              -5.45
 9.01 Init + 193386 193495  110  2  2   76   93   115 0.737  10.62
 9.02 Term + 203313 203433  121  0  1   69   44    74 0.231  -1.93
 9.03 PlyA + 204356 204361    6                               1.05

10.03 PlyA - 204805 204800    6                               1.05
10.02 Term - 209892 209736  157  2  1  100   43    81 0.745   1.22
10.01 Intr - 212243 212032  212  2  2   77   84   115 0.321   6.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_1|60_aa
XRKAGKVPETTPTNDINNFQKEGSPIKRVPAWLDRESMMVAPPMMSALGPDRTEPSHWVS

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_1|183_bp
nngagaaaggcgggaaaagtgcctgaaaccacacccactaatgacatcaacaatttccag
aaggaaggctcgcccataaaaagggtgccagcttggctggacagagaaagcatgatggtg
gccccacccatgatgtcagccctgggccctgaccgtacagaaccttcacactgggtttct
taa

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_2|136_aa
MSLPGGEQHMQGPWGGFQFSLLEKVREESVWLGEEKEILLIGAFYRVLIGAFYRTLIGAF
YNPLASYRALIGAFLQSADWCVLQSSCKTGKFSKSPLDPGSPAGVISQKDEARFLLPAAE
GMWFQDSHSESLTLIP

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_2|411_bp
atgagtcttcctggaggtgagcagcacatgcaagggccctggggtggctttcagtttagt
ttattggagaaagtgagagaagaatctgtgtggctaggtgaagagaaggagatcctgctg
attggtgcattttacagagtgctgattggtgcattttacagaacactgattggtgcattt
tataatcctcttgctagctacagagcgctgattggtgcgtttttacagagtgctgattgg
tgtgttttacaatcctcttgtaagacaggaaagttctccaagtccccactcgacccagga
agtccagctggcgtcatctctcaaaaggacgaagcacgcttccttctacctgcagctgag
ggaatgtggtttcaagacagccactcagagagcttgacacttattccctag

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_3|95_aa
MWNPSNWQKQRLGGIIDEVERGGLYNSGPTSFQRDMRGMEKDRSYLDRYRELNGKIVLED
SSKLQLLLFLALYASVDVAPSAQTACSQILSHENY

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_3|288_bp
atgtggaaccctagcaactggcaaaagcaaagattaggaggaatcattgatgaagttgaa
agaggaggactttataattcaggtcctacttccttccagagagacatgcgtggcatggag
aaggatcgatcatatcttgacagatatagagaattgaatgggaaaattgttttggaagat
tccagcaagctccagctgcttctgttcctggctttgtatgccagtgtggatgtggctccc
tctgcccagactgcctgcagccaaattctttctcatgagaattactga

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_4|107_aa
MGTQFTWQTHVAVNETETALASVSMGHPNRIVEEELEYCHPNFKVEIWTGDTDFGILRII
NVATVQVDDIKSLQLPEEVLNLRSHSFYMRKKDKWFKSGMKEERLQG

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_4|324_bp
atgggcactcaattcacatggcaaactcatgtagcagtgaatgagacagaaaccgctctt
gcctcggtgtctatgggccatccaaatagaattgtagaggaagagcttgaatattgccat
ccaaacttcaaagtggagatctggacaggagacacagactttggaatactaagaataatt
aatgttgccacagtgcaagtagatgatattaagagtttacagctgccagaagaggttctg
aatttaaggagccatagtttttacatgaggaagaaggacaaatggttcaagagtggcatg
aaggaggagcggttacaaggttaa

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_5|217_aa
MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPRYPFTADQEIPETDWEVYLRETA
NAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYE
HRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMMF

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_5|654_bp
atgagcctctgggtggacaagtatcggccctgctccttgggacggctggactatcacaag
gagcaggcggcccagctgcggaacctggtgcagtgtggtgactttcctcatctgttagtg
tacggaccatcaggtgctggaaaaaagacaagaattatgtgtattctacgtgaactttat
ggtgttggagtggaaaaattgagaattgaacatcagaccatcacaactccatctaaaaaa
aaaattgaaattagcaccattgcaagtaactaccaccttgaagttaatcctagatatcct
tttactgcagatcaagaaatccctgagacagattgggaggtgtatctgagggagactgca
aatgctattgtcagtcagcaaactccacaaaggctccttgaagttcgtggaaggctgtat
gagcttctaactcattgtattcctcctgagataataatgaagggccttctctcagaactg
ttacataattgtgatggacaactgaaaggggaggtggcacaaatggcagcttactatgag
catcgtctacagctgggtagcaaagccatttatcacttggaagcgtttgtggccaaattc
atggcactttataagaagttcatggaggatggattggaaggcatgatgttctga

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_6|70_aa
MTSPNKLHKVSVTSPEVKEICDLSDREFQTAVLRKCNEIQDNIEKQVRVLLDKCNKDIEK
FLKIKQKFCS

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_6|213_bp
atgacctcaccaaacaaactacataaggtatcagtgaccagtccagaagtgaaagagata
tgtgacctttcagacagagaattccaaacagctgttttgaggaagtgcaatgaaattcaa
gataacatagagaagcaagtcagagtcctattagataaatgtaacaaagacattgaaaaa
tttttaaaaatcaaacagaaattctgcagctga

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_7|172_aa
MDTNINLDGSQRQGGQPHPVAKLDEEKKGKELTLEVCLCNFSGTNSSITHTQSMHSHSRP
RAVTREGKERVSLSSRLPGTHAESIVTLKSRGISKNTSKAGSQKEEKSGVQVTGCTLEAT
GNASSAEGTNDHLQAVSSHGLSSMHAPGVSSSSYEVTSPIRLGPHPYDIIQP

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_7|519_bp
atggacacaaacatcaacttggatggatctcaaaggcaaggtggccagccccatccagta
gcaaaactagatgaggaaaagaaaggcaaagaactcacactggaggtttgcctttgtaat
ttctcaggcaccaactcctccatcacacacactcaatccatgcattcccattccagacct
agagctgtcactagagaggggaaagaacgagtttctctctcctcacggctgcctgggaca
catgcggagtcgattgtcacattaaaaagccgagggataagcaaaaacacatccaaagca
ggcagccagaaggaagagaagtctggggtccaagtcacaggatgcacattggaggcaact
gggaatgcctcctctgcagaggggacaaatgaccaccttcaagctgtgtcctcacatggt
ctttcatctatgcatgcccctggtgtctcttcctcatcttatgaggtcaccagtcctatt
agattagggccacacccttatgacatcattcaaccttaa

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_8|140_aa
MLPDFKLYYKATVTKTAWYWYQNRDVDQWNRTEPSEIMLRIYNYLIFDKPEKNKKWGKDS
LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNIRPKTIKTLEENLGITIQDIGM
GKDFMSKTPKAMATKAKIDI

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_8|423_bp
atgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatgtcgatcaatggaacagaacagagccctcagaaataatgctgcgt
atctacaactatctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattcc
ctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggat
cccttccttacaccttatacaaaaattaattcaagatggattaaagacttaaacattaga
cctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatg
ggcaaggacttcatgtctaaaacaccaaaagcaatggcaactaaagccaaaattgacatc
taa

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_9|76_aa
MALAPDQLSVRAFVLHQNMVKKDKGEADTSEEGLNPREGSQPLHETYTDDMNLLFLRRRL
HLLHKLQHQQLGICVS

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_9|231_bp
atggcactggcacctgatcagctttcggtgagggcttttgtactgcatcagaacatggtg
aagaaggacaaaggggaagcagacacatctgaagagggactgaacccaagggaagggtct
caacccctgcatgaaacatacactgatgacatgaatttgctgtttttaaggaggagattg
catttgttacataaactgcagcatcagcagcttgggatctgtgtttcttag

>gi568815585f:33718179_33936292|GENSCAN_predicted_peptide_10|122_aa
MLLALKYQTLGSSAFGLLESHQWFLRGFQAFGHRLKAALSASLLLRFWDFNWLPCSSTCR
RPIAGLHLVIIFTLCQMEMIIIVTHLTGLFGRLNELLDVNSALPMVDVMRMLAAILTAEL
SP

>gi568815585f:33718179_33936292|GENSCAN_predicted_CDS_10|369_bp
atgctccttgccctcaaatatcagactttaggttcttcagcatttggactcttggagtca
caccagtggtttctgaggggctttcaggcctttggccacagactgaaggctgcactgtca
gcttccctacttttgaggttttgggacttcaactggcttccttgctcctcaacttgcaga
cggcctattgcgggacttcaccttgtgatcatattcaccctctgtcaaatggagatgata
ataattgtcacccaccttacagggctgtttggaagactaaatgagttattagatgttaac
agtgccttgcccatggtagatgttatgagaatgttagctgctattcttactgctgaatta
agtccctag