Result of FASTA (omim) for pF1KB6476
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6476, 355 aa
  1>>>pF1KB6476 355 - 355 aa - 355 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.8005+/-0.000536; mu= 5.1988+/- 0.033
 mean_var=237.6441+/-51.987, 0's: 0 Z-trim(113.4): 314  B-trim: 37 in 1/59
 Lambda= 0.083198
 statistics sampled from 22343 (22768) to 22343 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.267), width:  16
 Scan time:  6.470

The best scores are:                                      opt bits E(85289)
XP_011520191 (OMIM: 603362) PREDICTED: endophilin- ( 355) 2321 292.1 1.2e-78
NP_001288038 (OMIM: 603362) endophilin-A3 isoform  ( 355) 2321 292.1 1.2e-78
NP_001311112 (OMIM: 603362) endophilin-A3 isoform  ( 355) 2321 292.1 1.2e-78
NP_003018 (OMIM: 603362) endophilin-A3 isoform a [ ( 347) 2162 273.1 6.7e-73
NP_001311113 (OMIM: 603362) endophilin-A3 isoform  ( 312) 2028 256.9 4.3e-68
NP_001311115 (OMIM: 603362) endophilin-A3 isoform  ( 312) 2028 256.9 4.3e-68
XP_016877975 (OMIM: 603362) PREDICTED: endophilin- ( 278) 1817 231.5 1.7e-60
NP_001311114 (OMIM: 603362) endophilin-A3 isoform  ( 278) 1817 231.5 1.7e-60
NP_001288037 (OMIM: 603362) endophilin-A3 isoform  ( 278) 1817 231.5 1.7e-60
NP_001311116 (OMIM: 603362) endophilin-A3 isoform  ( 278) 1817 231.5 1.7e-60
NP_001311111 (OMIM: 603362) endophilin-A3 isoform  ( 360) 1679 215.1 1.9e-55
NP_003017 (OMIM: 604465) endophilin-A1 [Homo sapie ( 352) 1532 197.4 3.9e-50
XP_011516307 (OMIM: 604465) PREDICTED: endophilin- ( 386) 1530 197.2 4.9e-50
XP_011520194 (OMIM: 603362) PREDICTED: endophilin- ( 217) 1403 181.7 1.3e-45
XP_011520193 (OMIM: 603362) PREDICTED: endophilin- ( 237) 1402 181.6 1.5e-45
NP_003016 (OMIM: 601768) endophilin-A2 isoform 1 [ ( 368) 1184 155.7 1.5e-37
XP_016882635 (OMIM: 601768) PREDICTED: endophilin- ( 358) 1182 155.4 1.8e-37
XP_011526485 (OMIM: 601768) PREDICTED: endophilin- ( 333) 1082 143.4 6.9e-34
NP_001186872 (OMIM: 601768) endophilin-A2 isoform  ( 320)  708 98.5 2.2e-20
NP_001186873 (OMIM: 601768) endophilin-A2 isoform  ( 304)  545 78.9 1.6e-14
NP_057093 (OMIM: 609287) endophilin-B1 isoform 1 [ ( 365)  300 49.6 1.3e-05
NP_001193580 (OMIM: 609287) endophilin-B1 isoform  ( 394)  271 46.1 0.00015
XP_016856898 (OMIM: 609287) PREDICTED: endophilin- ( 235)  260 44.6 0.00027
XP_006710735 (OMIM: 609287) PREDICTED: endophilin- ( 402)  260 44.8 0.00039
XP_016856899 (OMIM: 609287) PREDICTED: endophilin- ( 219)  255 43.9  0.0004
NP_001273975 (OMIM: 609288) endophilin-B2 isoform  ( 395)  258 44.6 0.00045
NP_064530 (OMIM: 609288) endophilin-B2 isoform b [ ( 395)  258 44.6 0.00045
XP_005252155 (OMIM: 609288) PREDICTED: endophilin- ( 400)  258 44.6 0.00046
NP_001193581 (OMIM: 609287) endophilin-B1 isoform  ( 386)  256 44.3 0.00053
XP_011539840 (OMIM: 609287) PREDICTED: endophilin- ( 378)  255 44.2 0.00057
XP_006717254 (OMIM: 609288) PREDICTED: endophilin- ( 399)  251 43.7 0.00082
NP_001273974 (OMIM: 609288) endophilin-B2 isoform  ( 404)  251 43.8 0.00083
XP_006717252 (OMIM: 609288) PREDICTED: endophilin- ( 424)  246 43.2  0.0013
XP_005252157 (OMIM: 609288) PREDICTED: endophilin- ( 379)  239 42.3  0.0021
XP_006717253 (OMIM: 609288) PREDICTED: endophilin- ( 423)  239 42.3  0.0023
XP_006717251 (OMIM: 609288) PREDICTED: endophilin- ( 428)  239 42.3  0.0023
NP_001139147 (OMIM: 616349) sorbin and SH3 domain- ( 492)  226 40.9  0.0075
XP_016864263 (OMIM: 616349) PREDICTED: sorbin and  ( 564)  226 40.9  0.0082
XP_016864261 (OMIM: 616349) PREDICTED: sorbin and  ( 619)  226 41.0  0.0087
XP_016864262 (OMIM: 616349) PREDICTED: sorbin and  ( 619)  226 41.0  0.0087
XP_016864259 (OMIM: 616349) PREDICTED: sorbin and  ( 627)  226 41.0  0.0088
XP_016864258 (OMIM: 616349) PREDICTED: sorbin and  ( 635)  226 41.0  0.0089
XP_016864257 (OMIM: 616349) PREDICTED: sorbin and  ( 636)  226 41.0  0.0089
XP_016864255 (OMIM: 616349) PREDICTED: sorbin and  ( 642)  226 41.0  0.0089
XP_016864256 (OMIM: 616349) PREDICTED: sorbin and  ( 642)  226 41.0  0.0089
NP_001139142 (OMIM: 616349) sorbin and SH3 domain- ( 644)  226 41.0  0.0089
XP_016864260 (OMIM: 616349) PREDICTED: sorbin and  ( 645)  226 41.0   0.009
XP_016864253 (OMIM: 616349) PREDICTED: sorbin and  ( 650)  226 41.0   0.009
XP_016864254 (OMIM: 616349) PREDICTED: sorbin and  ( 650)  226 41.0   0.009
XP_005263370 (OMIM: 616349) PREDICTED: sorbin and  ( 658)  226 41.0  0.0091


>>XP_011520191 (OMIM: 603362) PREDICTED: endophilin-A3 i  (355 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1532.8  bits: 292.1 E(85289): 1.2e-78
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
              250       260       270       280       290       300

              310       320       330       340       350     
pF1KB6 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
              310       320       330       340       350     

>>NP_001288038 (OMIM: 603362) endophilin-A3 isoform c [H  (355 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1532.8  bits: 292.1 E(85289): 1.2e-78
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
              250       260       270       280       290       300

              310       320       330       340       350     
pF1KB6 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
              310       320       330       340       350     

>>NP_001311112 (OMIM: 603362) endophilin-A3 isoform c [H  (355 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1532.8  bits: 292.1 E(85289): 1.2e-78
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
              250       260       270       280       290       300

              310       320       330       340       350     
pF1KB6 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
              310       320       330       340       350     

>>NP_003018 (OMIM: 603362) endophilin-A3 isoform a [Homo  (347 aa)
 initn: 2162 init1: 2162 opt: 2162  Z-score: 1429.8  bits: 273.1 E(85289): 6.7e-73
Smith-Waterman score: 2162; 99.4% identity (100.0% similar) in 335 aa overlap (21-355:13-347)

               10        20        30        40        50        60
pF1KB6 MDGIFAGIICNQANRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                           ..::::::::::::::::::::::::::::::::::::::
NP_003         MSVAGLKKQFHKASQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILS
                       10        20        30        40        50  

               70        80        90       100       110       120
pF1KB6 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGN
             60        70        80        90       100       110  

              130       140       150       160       170       180
pF1KB6 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKK
            120       130       140       150       160       170  

              190       200       210       220       230       240
pF1KB6 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEI
            180       190       200       210       220       230  

              250       260       270       280       290       300
pF1KB6 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRG
            240       250       260       270       280       290  

              310       320       330       340       350     
pF1KB6 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
            300       310       320       330       340       

>>NP_001311113 (OMIM: 603362) endophilin-A3 isoform e [H  (312 aa)
 initn: 2028 init1: 2028 opt: 2028  Z-score: 1343.4  bits: 256.9 E(85289): 4.3e-68
Smith-Waterman score: 2028; 100.0% identity (100.0% similar) in 312 aa overlap (44-355:1-312)

            20        30        40        50        60        70   
pF1KB6 NRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYR
                                     ::::::::::::::::::::::::::::::
NP_001                               MERKIDVTNKVVAEILSKTTEYLQPNPAYR
                                             10        20        30

            80        90       100       110       120       130   
pF1KB6 AKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGNALIEVGESMKLMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGNALIEVGESMKLMA
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KB6 EVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGKIPDEEVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGKIPDEEVRQ
              100       110       120       130       140       150

           200       210       220       230       240       250   
pF1KB6 AVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRIS
              160       170       180       190       200       210

           260       270       280       290       300       310   
pF1KB6 AASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRGLYDFEPENQGELG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRGLYDFEPENQGELG
              220       230       240       250       260       270

           320       330       340       350     
pF1KB6 FKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 FKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
              280       290       300       310  

>>NP_001311115 (OMIM: 603362) endophilin-A3 isoform e [H  (312 aa)
 initn: 2028 init1: 2028 opt: 2028  Z-score: 1343.4  bits: 256.9 E(85289): 4.3e-68
Smith-Waterman score: 2028; 100.0% identity (100.0% similar) in 312 aa overlap (44-355:1-312)

            20        30        40        50        60        70   
pF1KB6 NRCLTWTSQQLFSEKISGAEGTKLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYR
                                     ::::::::::::::::::::::::::::::
NP_001                               MERKIDVTNKVVAEILSKTTEYLQPNPAYR
                                             10        20        30

            80        90       100       110       120       130   
pF1KB6 AKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGNALIEVGESMKLMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDSTFGNALIEVGESMKLMA
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KB6 EVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGKIPDEEVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGKIPDEEVRQ
              100       110       120       130       140       150

           200       210       220       230       240       250   
pF1KB6 AVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMRIS
              160       170       180       190       200       210

           260       270       280       290       300       310   
pF1KB6 AASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRGLYDFEPENQGELG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AASSVPRREYKPRPVKRSSSELNGVSTTSVVKTTGSNIPMDQPCCRGLYDFEPENQGELG
              220       230       240       250       260       270

           320       330       340       350     
pF1KB6 FKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 FKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIVPLPQ
              280       290       300       310  

>>XP_016877975 (OMIM: 603362) PREDICTED: endophilin-A3 i  (278 aa)
 initn: 1817 init1: 1817 opt: 1817  Z-score: 1207.1  bits: 231.5 E(85289): 1.7e-60
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 278 aa overlap (78-355:1-278)

        50        60        70        80        90       100       
pF1KB6 IDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                     ::::::::::::::::::::::::::::::
XP_016                               MLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                             10        20        30

       110       120       130       140       150       160       
pF1KB6 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
               40        50        60        70        80        90

       170       180       190       200       210       220       
pF1KB6 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
              100       110       120       130       140       150

       230       240       250       260       270       280       
pF1KB6 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
              160       170       180       190       200       210

       290       300       310       320       330       340       
pF1KB6 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
              220       230       240       250       260       270

       350     
pF1KB6 EVIVPLPQ
       ::::::::
XP_016 EVIVPLPQ
               

>>NP_001311114 (OMIM: 603362) endophilin-A3 isoform f [H  (278 aa)
 initn: 1817 init1: 1817 opt: 1817  Z-score: 1207.1  bits: 231.5 E(85289): 1.7e-60
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 278 aa overlap (78-355:1-278)

        50        60        70        80        90       100       
pF1KB6 IDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                     ::::::::::::::::::::::::::::::
NP_001                               MLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                             10        20        30

       110       120       130       140       150       160       
pF1KB6 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
               40        50        60        70        80        90

       170       180       190       200       210       220       
pF1KB6 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
              100       110       120       130       140       150

       230       240       250       260       270       280       
pF1KB6 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
              160       170       180       190       200       210

       290       300       310       320       330       340       
pF1KB6 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
              220       230       240       250       260       270

       350     
pF1KB6 EVIVPLPQ
       ::::::::
NP_001 EVIVPLPQ
               

>>NP_001288037 (OMIM: 603362) endophilin-A3 isoform b [H  (278 aa)
 initn: 1817 init1: 1817 opt: 1817  Z-score: 1207.1  bits: 231.5 E(85289): 1.7e-60
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 278 aa overlap (78-355:1-278)

        50        60        70        80        90       100       
pF1KB6 IDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                     ::::::::::::::::::::::::::::::
NP_001                               MLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                             10        20        30

       110       120       130       140       150       160       
pF1KB6 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
               40        50        60        70        80        90

       170       180       190       200       210       220       
pF1KB6 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
              100       110       120       130       140       150

       230       240       250       260       270       280       
pF1KB6 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
              160       170       180       190       200       210

       290       300       310       320       330       340       
pF1KB6 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
              220       230       240       250       260       270

       350     
pF1KB6 EVIVPLPQ
       ::::::::
NP_001 EVIVPLPQ
               

>>NP_001311116 (OMIM: 603362) endophilin-A3 isoform f [H  (278 aa)
 initn: 1817 init1: 1817 opt: 1817  Z-score: 1207.1  bits: 231.5 E(85289): 1.7e-60
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 278 aa overlap (78-355:1-278)

        50        60        70        80        90       100       
pF1KB6 IDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                     ::::::::::::::::::::::::::::::
NP_001                               MLNTVSKIRGQVKTTGYPQTEGLLGDCMLK
                                             10        20        30

       110       120       130       140       150       160       
pF1KB6 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLK
               40        50        60        70        80        90

       170       180       190       200       210       220       
pF1KB6 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLEGRRLDYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFI
              100       110       120       130       140       150

       230       240       250       260       270       280       
pF1KB6 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAALDYHRQSTEILQELQSKLQMRISAASSVPRREYKPRPVKRSSSELNGVSTTSVVKTT
              160       170       180       190       200       210

       290       300       310       320       330       340       
pF1KB6 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSNIPMDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYV
              220       230       240       250       260       270

       350     
pF1KB6 EVIVPLPQ
       ::::::::
NP_001 EVIVPLPQ
               




355 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:26:14 2016 done: Fri Nov  4 16:26:15 2016
 Total Scan time:  6.470 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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