GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:35:56

Sequence gi568815592r:42598298_42822334 : 224037 bp : 43.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5291   5421  131  1  2  116   78    44 0.927   5.69
 1.02 Intr +   7424   7562  139  2  1   43   95    97 0.961   6.37
 1.03 Intr +   8292   8354   63  2  0   67  103    22 0.573   0.51
 1.04 Intr +  18943  19041   99  0  0   56  105    74 0.983   6.21
 1.05 Intr +  19112  19210   99  1  0   85   89    88 0.990   8.91
 1.06 Intr +  34255  34418  164  0  2   74  108    85 0.968   7.87
 1.07 Intr +  34508  34607  100  2  1  104   91     4 0.907   2.41
 1.08 Intr +  44119  44184   66  0  0   74   95    37 0.156   2.10
 1.09 Intr +  46176  46239   64  2  1   98  111    23 0.984   3.89
 1.10 Intr +  47169  47293  125  1  2   70   95    40 0.901   3.20
 1.11 Intr +  49821  49873   53  2  2   59   89    32 0.341  -1.89
 1.12 Intr +  51987  52089  103  0  1  106   86    40 0.350   5.78
 1.13 Intr +  60349  60527  179  0  2  -36   66   181 0.368   2.22
 1.14 Intr +  64961  65122  162  2  0   53  108    40 0.510   1.59
 1.15 Intr +  71795  71943  149  2  2   73   82    65 0.838   4.28
 1.16 Intr +  78486  78576   91  1  1   48  113    55 0.547   3.05
 1.17 Intr +  86497  86574   78  1  0  106   99    -4 0.603   1.17
 1.18 Intr +  89919  90089  171  0  0   27   94    96 0.741   3.16
 1.19 Intr +  91272  91373  102  0  0   84  110    13 0.822   2.39
 1.20 Term +  92735  92876  142  2  1  116   32    64 0.809   1.00
 1.21 PlyA +  92962  92967    6                               1.05

 2.04 PlyA -  92976  92971    6                               1.05
 2.03 Term - 100210  99998  213  1  0  100   55   357 0.960  30.83
 2.02 Intr - 106314 106068  247  2  1   51   80   350 0.902  27.96
 2.01 Init - 106936 106881   56  1  2   50   95   102 0.987   5.91
 2.00 Prom - 121592 121553   40                              -3.56

 3.02 PlyA - 121742 121737    6                              -0.45
 3.01 Sngl - 124037 123453  585  2  0  107   48   877 0.945  81.79
 3.00 Prom - 126825 126786   40                              -6.96

 4.00 Prom + 127465 127504   40                              -8.96
 4.01 Sngl + 128823 129227  405  2  0   25   53   835 0.682  67.98
 4.02 PlyA + 129875 129880    6                               1.05

 5.02 PlyA - 133124 133119    6                               1.05
 5.01 Sngl - 147776 146736 1041  2  0   92   47  1339 0.591 127.34
 5.00 Prom - 151886 151847   40                              -4.76

 6.03 PlyA - 152796 152791    6                               1.05
 6.02 Term - 159965 159765  201  2  0   76   54   131 0.975   5.89
 6.01 Init - 160093 160085    9  1  0   75   81    14 0.658  -0.91
 6.00 Prom - 169924 169885   40                              -3.66

 7.04 PlyA - 170786 170781    6                               1.05
 7.03 Term - 173675 173589   87  2  0  131   36    71 0.631   3.86
 7.02 Intr - 183423 183359   65  1  2   74   92    11 0.352  -1.46
 7.01 Init - 185060 184877  184  2  1   68   85   181 0.714  13.08
 7.00 Prom - 189793 189754   40                              -4.06

 8.04 PlyA - 189931 189926    6                              -0.45
 8.03 Term - 190770 190609  162  0  0  106   49    75 0.611   3.34
 8.02 Intr - 204197 204101   97  1  1   20  106    83 0.496   3.31
 8.01 Init - 210245 210169   77  2  2   77   42    92 0.574   4.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_1|759_aa
DPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVH
TYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVNYQQLQRDF
MEDDHERAVSVTALSVQFFTAPTLNYERLQSDYVTDDHDREFSVADLSVQIFTVPSLARM
LITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILDLKYVLISKPT
EWSDELRQKFLEGFDAFLELLKCMQIYYYHNVKCRREMFDKDVVMLQDVVQQNNTLIEEM
LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMESV
IEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKSSRDKDKAERKRKAEIAR
LRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDHRYFDSVQAKEQRRQQRLRL
HTSYDVENGEFLCPLCECLSNTVIPLLLPPRNIFNKIPYSESIKEMLTTFGTATYKVGLK
VHPNEEDPRVPIMCWGSCAYTIQSIEENGMDQENPPCEEESAVLALYKTLHQYTGRYPRE
SNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGSLLCSQSYCCQTELEGEDV
GACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPYLDDYGETDQGLRRGNPLHL
CKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_1|2280_bp
gatcctcttgttcatttatcagaagatgtgatagcaagaacttataacatttttgctatt
acgtttcggtatgcagtagaaatattaacctgggaaaaagaaagtgaattgccagcagat
ttagagatggtagagaagagtgacacctactattgcatgctgtttaatgatgaggttcac
acctatgaacaagttatttatactcttcagaaagctgttaactgtacacaaaaagaagct
attggttttgcaactacagtagatcgagatgggcgtaggtctgttcgatatggagatttt
cagtattgtgagcaagcaaaatcagtaattgtgaattaccagcagttgcagagagatttt
atggaggatgatcacgagcgagcagtgtcggtgactgctctatctgtccagttcttcacc
gcacctactctgaactatgagcgtttgcagagtgattatgtgacagatgaccacgacaga
gagttttcagtcgcagacctctcggttcagatattcacggttccttcacttgctcgaatg
ctcatcacagaagaaaacttaatgagcattatcattaagacttttatggatcatttgaga
catcgagatgcccagggcagatttcagtttgaacgatacactgctttacaagccttcaaa
tttaggagagtacagagccttattttagatctcaagtatgtgttaattagcaaaccaact
gaatggtcagatgagctgaggcagaagttcctagaagggtttgatgcctttttggaatta
ctaaaatgtatgcagatttattactaccataatgtgaaatgcagacgtgagatgtttgac
aaggatgtagtaatgcttcaggatgttgttcagcagaacaatactctaatagaagaaatg
ctatacctcattataatgcttgttggagagagatttagtcctggagttggacaggtaaat
gctacagatgaaatcaagcgagagattatccatcagttgagtatcaagcctatggctcat
agtgaattggtaaagtctttacctgaagatgagaacaaggagactggcatggagagtgta
atcgaagcagttgcccatttcaagaaacctggattaacaggacgaggcatgtatgaactg
aaaccagaatgtgccaaagagttcaacttgtatttctatcacttttcaagggcagaacag
tccaagagttcaagggacaaagacaaagctgagaggaagagaaaagcagagattgccaga
ctgcgcagagaaaagatcatggctcagatgtctgaaatgcagcggcattttattgatgaa
aacaaagaactctttcagcagacattagaactggatgcctcaacctctgctgttcttgat
cataggtattttgattccgttcaagctaaagaacagcgaaggcaacagagattacgctta
catacgagctatgatgtagaaaacggagaattcctttgccccctttgtgaatgcttgagt
aatactgttattcctctgctgcttcctccaagaaatatttttaacaagatcccttattct
gagagcataaaagaaatgctaacgacatttggaactgctacctacaaggtgggactaaag
gttcatcccaatgaagaggatcctcgtgttcccataatgtgttggggtagctgcgcgtac
accatccaaagcatagaagagaatggcatggatcaagaaaatcccccttgtgaagaagaa
tcagcagttcttgctttgtataaaacacttcaccagtatacgggaagatatccaagagaa
tctaacaaattaataaaccttccagaggattacagcagcctcattaatcaagcatccaat
ttctcgtgcccgaaatcaggtggtgataagagcagagccccaactctgtgccttgtgtgc
ggatctctgctgtgctcccagagttactgctgccagactgaactggaaggggaggatgta
ggagcctgcacagctcacacctactcctgtggctctggagtgggcatcttcctgagagta
cgggaatgtcaggtgctatttttagctggcaaaaccaaaggctgtttttattctcctcct
taccttgatgactatggggagaccgaccagggactcagacggggaaatcctttacattta
tgcaaagagcgattcaagaagattcagaagctctggcaccaacacagtgtcacagaggaa
attggacatgcacaggaagccaatcagacactggttggcattgactggcaacatttataa

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_2|171_aa
MLGAPPISLENLLAAVSLSRIKSNVDGRYLVDGVPFSCCNPSSPRPCIQYQITNNSAHYS
YDHQTEELNLWVRGCRAALLSYYSSLMNSMGVVTLLIWLFEVTITIGLRYLQTSLDGVSN
PEESESESQGWLLERSVPETWKAFLESVKKLGKGNQVEAEGADAGQAPEAG

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_2|516_bp
atgctgggagccccgcccatcagcctggagaacctgcttgcagctgtgtcccttagtcga
atcaagagcaacgtggatgggcggtacctggtggacggcgtccctttcagctgctgcaat
cctagctcgccacggccctgcatccagtatcagatcaccaacaactcagcacactacagt
tacgaccaccagacggaggagctcaacctgtgggtgcgtggctgcagggctgccctgctg
agctactacagcagcctcatgaactccatgggtgtcgtcacgctcctcatttggctcttc
gaggtgaccattacaattgggctgcgctacctacagacgtcgctggatggtgtgtccaac
cccgaggaatctgagagcgagagccagggctggctgctggagaggagcgtgccggagacc
tggaaggcctttctggagagtgtgaagaagctgggcaagggcaaccaggtggaagccgag
ggcgcagacgcaggccaggccccagaggctggctga

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_3|194_aa
MALLKVKFDQKKRVKLAQGLWLMNWFSVLAGIIIFSLGLFLKIELRKRSDVMNNSESHFV
PNSLIGMGVLSCVFNSLAGKICYDALDPAKYARWKPWLKPYLAICVLFNIILFLVALCCF
LLRGSLENTLGQGLKNGMKYYRDTDTPGRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWI
SNRYLDFSSKEVKE

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_3|585_bp
atggcgctactgaaagtcaagtttgaccagaagaagcgggtcaagttggcccaagggctc
tggctcatgaactggttctccgtgttggctggcatcatcatcttcagcctaggactgttc
ctgaagattgaactccgaaagaggagcgatgtgatgaataattctgagagccattttgtg
cccaactcattgatagggatgggggtgctatcctgtgtcttcaactcgctggctgggaag
atctgctacgacgccctggacccagccaagtatgccagatggaagccctggctgaagccg
tacctggctatctgtgttctcttcaacatcatcctcttccttgtggctctctgctgcttt
ctgcttcggggctcgctggagaacaccctgggccaagggctcaagaacggcatgaagtac
taccgggacacagacacccctggcaggtgtttcatgaagaagaccatcgacatgctgcag
atcgagttcaaatgctgcggcaacaacggttttcgggactggtttgagattcagtggatc
agcaatcgctacctggacttttcctccaaagaagtcaaagagtga

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_4|134_aa
MLIVFAAACVLAFAPGPASPRSSPPPRPQSLPPPHPQTMSESKNGPEYASFFAVMAASAA
MVFSAPRAAYGTVKTGAGIAAMSVMRPELIMKSIIPVVTAGIIAIYGLVVTVLIASSPND
DISLYRSCLQLAPA

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_4|405_bp
atgctgatcgtcttcgccgccgcctgcgtgctcgccttcgcgcccggcccggcctcgccc
cggtcttcgcctccgcctcggccgcagagcttgccccctccccacccgcagacaatgtcc
gagtccaagaacggccccgagtatgcttcgtttttcgccgtcatggcagcctcggccgcc
atggtcttcagcgccccgcgcgctgcctatggcacggtcaagaccggtgccggcatcgcg
gccatgtctgtcatgcggccggagctgatcatgaagtccatcatcccggtggtcacggct
ggcatcatcgccatctatggcctggtggtgacagtcctcatcgccagctccccgaatgac
gacatcagcctctacaggagctgcctccagctagcgccggcctga

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_5|346_aa
MESVSCSAAAVRTGDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFF
VATFVRERAAVEELLERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARL
QAALAERRRGLQPKKRFAFKTRGKDAASSTKVDAAPGIPPAVESIQDSPLPKKAEGDLGP
SWVCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPV
STSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEID
KDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEERNIQWD

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_5|1041_bp
atggagtccgtcagttgctccgctgctgctgtcaggaccggagacatggagtcccagcgg
gacctgagcctggtgcctgagcggcttcagagacgcgaacaagaacggcagctggaagtt
gaaaggcggaaacaaaagcggcagaaccaggaggtagagaaggagaacagccactttttc
gtcgccacctttgttcgggagcgagcggccgtggaagagcttctggagcgcgcggagtcg
gtcgagcggctggaggaggcggcctctcggctccaggggctgcagaaactaatcaacgac
tcagtttttttcctagccgcttacgacctgcggcagggacaagaggcgctggcgcggctg
caggcggccttggccgagcggcgccgggggctgcagcccaagaagcgtttcgctttcaag
acccggggaaaggatgctgcttcgtctaccaaagtagacgcggctcctggcatccccccg
gcagttgaaagcatacaggactccccgctgcccaagaaggcggaaggagacctcggcccc
agctgggtctgcggtttctccaacctggagtcccaagtcttggagaagagagccagcgag
ttgcaccagcgcgacgttcttttgaccgaactgagcaactgcacggtcagactgtatgga
aatcccaacaccctgcggctaaccaaggcccacagctgcaagctgctctgcggtccggtg
tctacctctgttttcctggaggactgcagtgactgcgtgctggcagtggcctgccaacag
ctccgcatacacagtacgaaagacacccgcatcttcctgcaggtgaccagcagggccatc
gtggaggactgcagtgggatccagttcgccccttacacctggagctacccggagatcgac
aaggacttcgagagctctggtttagataggagcaaaaataactggaacgatgttgacgat
tttaactggctggcccgggatatggcctccccaaactggagtattcttcctgaagaggag
cgaaatatccagtgggactaa

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_6|69_aa
MRLGNNWLRYRELGDSGKPKGNETRWETVTIAQGEEDEEGAKPEEREPGQRDRERDQRAL
TVFVNWVDQ

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_6|210_bp
atgaggctgggcaataactggctacggtatagagaactgggggattcagggaagcccaag
ggtaacgagaccagatgggaaactgtaacaatagcccagggagaagaagatgaggaagga
gccaaacctgaagagagggagccaggccagagagacagagagagagatcagagagcatta
acagtatttgtcaactgggtggaccagtga

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_7|111_aa
MRRPSRTSLLAGAANSAGLAGDARLGRRSSARLGARPDAAADPRRCFEKAARRLGRGSPA
AEMYWFIQETVLFGFKTITKIHETGTYHNQISISCDSSTAADKCRNANIGE

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_7|336_bp
atgcgccgtcccagccgcacatctcttctggccggcgcggcgaacagcgcgggcctcgca
ggagacgcccggctgggccgccggtcctccgcgcggctgggggctcggccggacgcggcc
gcggatcctcggcggtgcttcgaaaaggcagcgaggcggctgggaaggggcagtcccgcg
gcagaaatgtattggtttattcaagaaacagttttatttggctttaaaacaattactaag
atccacgagacaggcacataccacaaccaaatcagcatatcttgtgacagttccacagct
gctgacaaatgcagaaatgcgaatattggagaataa

>gi568815592r:42598298_42822334|GENSCAN_predicted_peptide_8|111_aa
MVNLAMETEIRENQDIHDYFSKQENSLGNKGETPSQNNNNNNNNNNNKKKHEKLKEPKLT
FQGSSSKSPPCNYSQASGTASPLSNLQGKTRILGELITCLLFAALITAECC

>gi568815592r:42598298_42822334|GENSCAN_predicted_CDS_8|336_bp
atggtgaatctggcaatggaaacagaaatccgtgaaaatcaagacatccatgattatttt
agcaagcaagagaatagcctgggcaacaagggcgaaactccatctcaaaacaacaacaac
aacaacaacaacaacaacaacaaaaaaaaacacgaaaagctgaaagagccaaaactaaca
tttcaaggttcatcatcaaaatcacccccttgcaactactctcaagcctctggcactgct
tctcctctgtcaaacctgcagggcaaaacacgaattttgggtgaactgatcacctgcctg
ctcttcgctgccctcataacagctgaatgttgctag