GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:57:37

Sequence gi568815592f:108071458_108287460 : 216003 bp : 43.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   3194   2793  402  2  0   79   47   641 0.700  53.73
 1.00 Prom -  14950  14911   40                              -2.66

 2.05 PlyA -  15091  15086    6                               1.05
 2.04 Term -  28840  28810   31  0  1  114   34    47 0.124  -0.77
 2.03 Intr -  35079  34898  182  0  2   91   13   111 0.081   2.57
 2.02 Intr -  46662  46531  132  0  0   53   50   103 0.237   3.84
 2.01 Init -  47185  47003  183  1  0   17   69   180 0.459   6.12
 2.00 Prom -  60617  60578   40                              -4.06

 3.00 Prom +  75763  75802   40                              -4.46
 3.01 Init +  84420  84456   37  2  1   65   93    37 0.052   2.10
 3.02 Intr +  95195  95333  139  0  1   83   39    75 0.077   1.62
 3.03 Intr +  96834  96944  111  0  0   50  100    91 0.732   5.99
 3.04 Intr +  98029  98159  131  1  2   79   70    71 0.874   4.74
 3.05 Intr +  98716  98802   87  2  0   64   43    71 0.492   0.14
 3.06 Intr + 100001 100146  146  0  2   97   82   190 0.991  19.30
 3.07 Intr + 103379 103466   88  1  1  125   41    91 0.990   7.64
 3.08 Intr + 105046 105281  236  2  2   69   82   336 0.610  28.51
 3.09 Intr + 106638 106784  147  2  0   81   80   170 0.977  15.93
 3.10 Intr + 108866 108962   97  1  1   45   99     8 0.776  -2.82
 3.11 Intr + 109350 109499  150  1  0   65  119   144 0.984  15.33
 3.12 Intr + 110089 110194  106  2  1   76   60   122 0.463   7.47
 3.13 Term + 115844 116006  163  2  1   90   43    87 0.456   1.81
 3.14 PlyA + 116773 116778    6                               1.05

 4.00 Prom + 120182 120221   40                              -7.46
 4.01 Init + 123898 123948   51  0  0   75   93    72 0.806   6.77
 4.02 Term + 134160 134222   63  2  0  122   40    62 0.262   2.69
 4.03 PlyA + 135447 135452    6                               1.05

 5.05 PlyA - 136026 136021    6                               1.05
 5.04 Term - 136397 136280  118  1  1   55   48    62 0.136  -3.09
 5.03 Intr - 143165 143041  125  2  2   58  108    70 0.509   5.38
 5.02 Intr - 151588 151493   96  1  0   86  116    64 0.972   9.21
 5.01 Intr - 189536 189303  234  2  0    8  100   408 0.652  31.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 180739 180929  191  2  2   27   48   226 0.915  10.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:108071458_108287460|GENSCAN_predicted_peptide_1|134_aa
MEPGPTAAQRRCSLPPWLPLGLLLWSGLALGALPFGSSPHRVFHDLLSEQQLLEVEDLSL
SLLQGGGLGPLSLPPDLPDLDPECRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQ
QVVSKMDNISRAAG

>gi568815592f:108071458_108287460|GENSCAN_predicted_CDS_1|402_bp
atggagccgggcccgacagccgcgcagcggaggtgttcgttgccgccgtggctgccgctg
gggctgctgctgtggtcggggctggccctgggcgcgctccccttcggcagcagtccgcac
agggtcttccacgacctcctgtcggagcagcagttgctggaggtggaggacttgtccctg
tccctcctgcagggtggagggctggggcctctgtcgctgcccccggacctgccggatctg
gatcctgagtgccgggagctcctgctggacttcgccaacagcagcgcagagctgacaggg
tgtctggtgcgcagcgcccggcccgtgcgcctctgtcagacctgctaccccctcttccaa
caggtcgtcagcaagatggacaacatcagccgagccgcgggg

>gi568815592f:108071458_108287460|GENSCAN_predicted_peptide_2|175_aa
MRKKRAPSRYLPLRAPQAAGPRQPGFSRRAGRPLRPLRPLPTAPAARRAHGLGGWVLARA
QRNFEGGNCSGAHGLGGGSPSLSLHRVWEGLKPKLLGLRRVRGRKPFVFEPNVKSLPLGS
HYYPSKPLGFSSSSPLEGRLPSRTFPCSYVNPCAYICYVSAGAFVMIPSKMPHYI

>gi568815592f:108071458_108287460|GENSCAN_predicted_CDS_2|528_bp
atgcgaaagaaacgcgcccctagccggtacctcccgctccgggccccgcaggcggctggg
cctcgtcagcccgggttcagccgccgcgccggccgccccctgcgccccctgcgccccctg
cccacggcccccgcagcccggcgggcgcacggcctcggcggctgggtcctcgcgcgggcg
cagaggaacttcgagggcgggaactgctccggcgctcatggactcgggggcggcagcccg
agcctctccttgcaccgtgtctgggagggcctgaagcccaaactcctcgggctgagaagg
gtccggggccgcaagccctttgtctttgaaccaaatgtcaagtccctgcccctgggaagc
cattattaccccagcaagcccctgggcttctcaagttccagtcctctagagggccgcctc
ccctccaggacctttccttgctcctatgtaaatccctgtgcctacatctgctatgtgtcc
gctggggcctttgttatgatcccgtccaagatgccacattacatctga

>gi568815592f:108071458_108287460|GENSCAN_predicted_peptide_3|545_aa
MDMLSIATLANKGALQAGGQLESGGARRRGGRCRPGLGQRPPTAPPRDSQHEQASRINKP
PSSLAPGQALAYTPGSKEPRALSSFSGCGAPGALESATGKRTAGVTVLLGPKRGPWSGQR
ARVKQRMVVRYGNQVYRFQIPNPSAFGSSCRISGRPEAAGAQTGGLRIGRILDIPCKVCG
DRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLE
VNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPH
GLELAAVSTTPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWA
KSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKLNK
IISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDE
AQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY
KSSDI

>gi568815592f:108071458_108287460|GENSCAN_predicted_CDS_3|1638_bp
atggacatgctcagcattgccacacttgccaataaaggagccttgcaggctggagggcag
ctggagagcggcggcgcccggcggcgaggcgggcgctgccggccgggactcgggcagcgc
ccaccaaccgctccgccccgggacagccagcatgagcaagccagccggatcaacaagcct
cctagctcgctcgccccgggacaggccctcgcctacacccctggaagtaaggagccccgg
gctctttcgtccttttcggggtgtggagcccctggggcccttgaaagtgccacagggaag
aggacagctggggtgacagtactgctgggccccaaacgtggaccctggagcggtcagagg
gcgcgtgttaagcagaggatggttgtaagatatggaaaccaagtttaccgcttccagatc
cccaacccaagcgctttcggcagcagctgtcgaatttcagggaggcctgaggccgctggg
gcccaaactggaggccttcggataggccgcattttagatatcccctgcaaagtgtgtggc
gaccgcagctcggggaagcactacggggtctacgcctgcgacggctgctcaggttttttc
aaacggagcatccgaaggaataggacctatgtctgcaaatctggaaaccagggaggctgt
ccggtggacaagacgcacagaaaccagtgcagggcgtgtcggctgaagaagtgtttggaa
gtcaacatgaacaaagacgccgtgcagcacgagcgggggcctcggacgtccaccatccgc
aagcaagtggccctctacttccgtggacacaaggaggagaacggggccgccgcgcacttt
ccctcggcggcgctccctgcgccggccttcttcaccgcggtcacgcagctggagccgcac
ggcctggagctggccgcggtgtccaccactccagagcggcagaccctcgtgagcctggct
cagcccacgcccaagtacccccatgaagtgaatgggaccccaatgtatctctatgaagtg
gccacggagtcggtgtgtgaatcagctgccagacttctcttcatgagcatcaagtgggct
aagagtgtgccagccttctccacgctgtctttgcaagaccagctgatgcttttggaagat
gcttggagagaactgtttgttctaggaatagcacaatgggccattccggttgatgctaac
actctactggctgtatctggcatgaacggtgacaacacagattcccagaagctgaacaag
atcatatctgaaatacaggctttacaagaggtggtggctcgatttagacaactccggtta
gatgctactgaatttgcctgtctaaaatgcatcgtcactttcaaagccgttcctacacat
agtggttctgaactgagaagtttccggaatgctgccgccattgcagcccttcaagatgag
gctcagctaacgctcaacagctacatccataccagatatcccactcaaccctgtcgcttt
ggaaaactcctgttgcttttgccagctttacgttctattagcccatcaactatagaagaa
gtgtttttcaaaaaaaccatcggcaatgtgccaattacaagactgctttcagatatgtac
aaatccagtgatatctaa

>gi568815592f:108071458_108287460|GENSCAN_predicted_peptide_4|37_aa
MAAEPDAMHPLRLPAAQPTQHEDEDEDLYGDPLPLNE

>gi568815592f:108071458_108287460|GENSCAN_predicted_CDS_4|114_bp
atggcagctgaacctgatgcaatgcaccctctgcggctccccgcagcccagcctactcaa
catgaagatgaggatgaagacctttacggtgatccacttccacttaatgaatag

>gi568815592f:108071458_108287460|GENSCAN_predicted_peptide_5|190_aa
QRRRRRLNAEGAEGARGGGSSYSEMAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNP
QTVGVGRGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKA
FLRQLPFRGDDGIFDDNFIEERKQGLEQFINKVSARNESDPVDSTSNTKHLIVQSANRQE
RSNTSHEKTH

>gi568815592f:108071458_108287460|GENSCAN_predicted_CDS_5|573_bp
cagcggcggcggcggcggctgaacgcggagggggcggagggagcccgcggcggcggcagc
agctacagcgaaatggcggagaccgtggctgacacccggcggctgatcaccaagccgcag
aacctgaatgacgcctacggaccccccagcaacttcctcgagatcgatgtgagcaacccg
caaacggtgggggtcggccggggccgcttcaccacttacgaaatcagggtcaagacaaat
cttcctattttcaagctgaaagaatctactgttagaagaagatacagtgactttgaatgg
ctgcgaagtgaattagaaagagagagcaaggtcgtagttcccccgctccctgggaaagcg
tttttgcgtcagcttccttttagaggagatgatggaatatttgatgacaattttattgag
gaaagaaaacaagggctggagcagtttataaacaaagtgagtgccagaaatgaaagcgac
ccagtggactcaactagcaacaccaagcacttgattgtgcaaagtgctaacagacaggag
agatcgaacaccagtcatgaaaagactcactaa