GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:37:03

Sequence gi568815586r:10506278_10713532 : 207255 bp : 37.09% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +     58   1044  987  0  0   58   49   793 0.852  68.99
 1.02 PlyA +   1690   1695    6                               1.05

 2.02 PlyA -   3224   3219    6                               1.05
 2.01 Sngl -  11949  11206  744  0  0   59   42   213 0.589   9.74
 2.00 Prom -  12039  12000   40                              -6.15

 3.02 PlyA -  12200  12195    6                               1.05
 3.01 Sngl -  31549  31100  450  1  0   27   53   303 0.939  16.66
 3.00 Prom -  37939  37900   40                              -6.45

 4.03 PlyA -  38467  38462    6                               1.05
 4.02 Term -  45174  45069  106  2  1   53   45   168 0.532   5.90
 4.01 Init -  56001  55949   53  0  2   68   98     2 0.092  -0.12
 4.00 Prom -  58697  58658   40                              -3.75

 5.00 Prom +  63976  64015   40                              -4.95
 5.01 Sngl +  64823  64993  171  1  0   48   49   211 0.937   7.78
 5.02 PlyA +  66227  66232    6                               1.05

 6.09 PlyA -  67069  67064    6                               1.05
 6.08 Term -  74848  74419  430  0  1   80   44   201 0.033   8.69
 6.07 Intr -  75153  75081   73  1  1   56   80    35 0.010  -2.95
 6.06 Intr -  89650  89414  237  2  0   21   87   104 0.281   0.26
 6.05 Intr -  91932  91766  167  2  2   96   91    76 0.537   7.38
 6.04 Intr - 101659 101577   83  1  2   77  106    56 0.948   3.82
 6.03 Intr - 103664 103554  111  2  0   60   72   134 0.988   8.66
 6.02 Intr - 104403 104345   59  1  2  117  107    29 0.998   5.38
 6.01 Init - 107255 107162   94  2  1   82   93    54 0.977   5.89
 6.00 Prom - 108053 108014   40                              -7.25

 7.10 PlyA - 110386 110381    6                               1.05
 7.09 Term - 114071 113867  205  1  1  106   49   274 0.970  21.16
 7.08 Intr - 118582 118374  209  1  2   85    9    80 0.187  -3.25
 7.07 Intr - 121447 121364   84  1  0  107   99    82 0.977  10.30
 7.06 Intr - 123397 123216  182  2  2  128   88   131 0.991  15.77
 7.05 Intr - 125031 124768  264  1  0   90   93   214 0.999  18.66
 7.04 Intr - 127847 127713  135  0  0   58   98    97 0.983   7.32
 7.03 Intr - 128409 128290  120  1  0   40  103    77 0.159   3.95
 7.02 Intr - 135780 135708   73  0  1   94   61     5 0.028  -3.54
 7.01 Init - 136049 135972   78  2  0   84  110    14 0.412   4.31
 7.00 Prom - 144983 144944   40                              -4.05

 8.03 PlyA - 145005 145000    6                               1.05
 8.02 Term - 155274 155071  204  0  0   49   32   159 0.212   2.79
 8.01 Init - 167970 167677  294  0  0   42   39   228 0.569  10.53
 8.00 Prom - 169537 169498   40                              -5.05

 9.03 PlyA - 170886 170881    6                               1.05
 9.02 Term - 173822 173742   81  2  0   90   34   116 0.375   3.11
 9.01 Init - 189967 189782  186  1  0   65   60   127 0.129   6.71
 9.00 Prom - 193845 193806   40                              -3.95

10.07 PlyA - 194606 194601    6                               1.05
10.06 Term - 195076 195011   66  1  0  104   41    37 0.650  -2.44
10.05 Intr - 195857 195683  175  1  1   94   84   186 0.927  17.82
10.04 Intr - 197871 197774   98  0  2  109   77   166 0.578  15.49
10.03 Intr - 199971 199900   72  0  0   56  102    41 0.174   0.98
10.02 Intr - 203837 203631  207  2  0   59   98   300 0.924  26.45
10.01 Intr - 207056 206934  123  2  0  103   63   295 0.999  28.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  74949  74419  531  0  0   70   44   277 0.872  15.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_1|328_aa
MLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKERQAKEQY
EQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDV
NKPGCEVDDLKGGVAGGSILKGVLKVGQETEVRPGIVSKDSEGKLMCKSIFSKIVSLFAE
HNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQILGAVGALPEIFTELEISYFLLRRLLGV
RTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALS
RRVEKHWRLIGWGQIRRGVTIKPTVDDD

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_1|987_bp
atgctgaacggtgcagcagtgatggatgcagctcttctgttgatagctggtaatgaatct
tgccctcagcctcagacatctgaacacctggctgctatagagatcatgaaactgaagcat
attttgattctacaaaataaaattgatttggtaaaagaaaggcaggctaaagaacaatac
gagcagatccttgcgtttgtccaaggtacagtagcagagggagctcccattattccaatt
tcggctcagctgaaatacaatattgaagttgtttgtgagtacatagtaaagaaaattcca
gtacccccaagagactttacttcagagccccggcttattgttattagatcttttgatgtc
aacaaacctggctgtgaagttgatgaccttaagggaggtgtagctggtggtagtatccta
aaaggagtattaaaggtgggccaggagacagaagtaagacctggtattgtttccaaagat
agtgaaggaaaactcatgtgtaaatcaatcttttccaaaattgtttcactttttgcggag
cataatgatctgcaatatgctgctccaggcggtcttattggagttggaacaaaaattgac
cccactttgtgccgggctgacagaatggtggggcaaatacttggtgcagtcggagcttta
cctgagatattcacagaattggaaatttcctatttcctgcttagacggcttctaggtgta
cgcactgaaggagacaagaaagcagcaaaggttcaaaagctgtctaagaatgaagtgctc
atggtgaacataggatccctgtcgacaggagggagagttagtgctgtcaaggccgatttg
ggcaaaattgttttgaccaatccagtgtgcacagaggtaggagaaaaaattgcccttagc
cgaagagttgaaaaacactggcgtttaattggttggggtcagataagaagaggagtgaca
atcaagccaacagtagatgatgactga

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_2|247_aa
MGDLNTPLSTLDRSMRQKVNKYTQELNSALHQVDLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNHSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNKNKDTTYQNLWNTFKAVCTGKFIALNAHKRKQERSKIDNLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIEAQKTLQKINGSRSWFFERVNKIDRLLARLIK
KKREKIK

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_2|744_bp
atgggagaccttaacaccccactgtcaacattagacagatcaatgagacagaaagttaac
aagtatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccactcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacaagaacaaagacaca
acataccagaatctctggaacacattcaaagcagtgtgtacagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaacctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagaggcacaaaaaacccttcaaaaaattaatggatcc
aggagctggttttttgaaagggtcaacaaaattgatagattgctagcaagactaataaag
aagaaaagagagaaaatcaaatag

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_3|149_aa
MVQAPSLGSFPHAVESVGVQKSRIKVWESPPGFQRLYGDTWMSKQKFAAGEGPSWRTSAR
AVWKGNVGLKPPHRVSTGALPSGAVRKGPPSSKPQNGRSTNGLHGVPGKAADTQCQPVKA
GGRLYPAKPQGWSYPRPWKPTSCISVTWM

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_3|450_bp
atggtgcaagctccaagccttggcagctttccacatgctgttgagtctgtgggtgtacag
aagtcaagaataaaggtttgggaatctccacctggatttcagaggctctatggagacacc
tggatgtccaagcagaagtttgctgcaggggagggaccttcctggagaacctctgctagg
gcagtgtggaagggaaatgtgggattgaagcccccacacagagtctccactggggcacta
cctagtggagctgtgagaaaagggccaccgtcctccaaacctcagaatggtagatccacc
aatggcttgcatggtgtgcctggaaaagctgcagacactcagtgccagcctgtgaaagca
ggagggaggctataccctgcaaagccacaggggtggagctacccaagaccatggaaaccc
acctcttgcatcagtgtgacctggatgtga

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_4|52_aa
MVHTQDFTLALLELSNTSGVLEPLHLSPNGIRCAARTRFTGSMGAFVKIVRR

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_4|159_bp
atggtacacactcaagattttaccttagcattattggaattgtcaaataccagtggtgtc
ctggagcccctgcacctgtctccaaatggtatccgctgtgccgccaggacgcgcttcact
ggcagcatgggtgcctttgtgaagattgtgaggcgctag

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_5|56_aa
MCNKKSRGQETEGCRQLNSIINAIRCLNPSNLLRLDMWTTLWPHIAAIAPDQYSWQ

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_5|171_bp
atgtgtaataaaaagtctagaggtcaagagactgagggctgtcggcagctcaacagcatc
atcaatgccattcgctgtctaaatccttctaatcttctgcgtttggacatgtggacaacc
ttgtggccacacatagctgccatagccccagatcagtattcatggcaatga

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_6|417_aa
MAVASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVME
ELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKNHPI
SGFECKTYLLTLKMNDQGEIYSTLRFLQSPSESQNRLRPDDTQRPGKTDDKVFQCIQEKH
QRQEILRNCSEKYIMQNDNYLKEQILTNKTLKFDVLKNSFQQKKELDSRLIQKNRCHREN
EIVFKVLQNTGLKPQNFAVSVIALKGGPSSVCCSRALIAPFYRVLIGPFLQSADWCVYKP
LARHRVLIGAFLQSADWCIYKPLARHRELIGAFLQSADWCIYKPLARHRELIGAFLHSTD
WCVSKPLARHRVLIGAFLQSTDWCIYKPLARHRELIGAFLQSADWCVYKPLARQSTD

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_6|1254_bp
atggctgtggctagcgatttctacctgcgctactacgtagggcacaagggcaagtttggg
cacgagtttctggagttcgaatttcggccggacggaaagcttagatatgccaacaacagc
aattacaaaaatgatgtcatgatcagaaaagaggcttatgtgcacaagagtgtaatggaa
gaactgaagagaattattgatgacagtgaaattacaaaagaagatgatgctttgtggcct
ccccctgatagggttggccgacaggagcttgaaattgtaattggagatgagcacatatct
tttaccacatcaaaaataggttctcttattgatgtaaatcagtcaaaaaaccatcctatt
tcaggatttgaatgcaaaacttaccttcttactctaaagatgaatgatcagggagagatt
tattcaaccctgagatttttgcagtctccttcagagtcacagaatagattaaggcctgat
gatactcaaaggcctgggaaaactgatgacaaagtctttcagtgtattcaagaaaaacat
caacggcaggaaattctaagaaactgtagtgaaaagtacatcatgcaaaatgacaactac
ttaaaagagcagattttgacaaataagactttaaaatttgacgttctcaaaaatagcttt
cagcagaaaaaggaactggattcacgccttatacaaaagaacagatgtcatagagaaaat
gagatcgtttttaaagttttgcaaaatacaggattgaaaccacagaacttcgcagttagt
gttatagctcttaaaggtggcccatccagtgtttgttgctcccgagcactgattgctcca
ttttacagagtgctgattggtccgtttttacagagtgctgattggtgtgtttacaaacct
ttagctagacacagagtgctgattggtgcatttttacagagtgctgattggtgcatttac
aaacctttagctagacacagagagctgattggtgcatttttacagagtgctgattggtgc
atttacaaacctttagctagacacagagagctgattggtgcatttttacacagtactgat
tggtgcgtttccaaacctttagctagacacagagtgctgattggtgcatttttacagagt
actgattggtgcatttacaaacctttagctagacacagagagctgattggtgcattttta
cagagtgccgattggtgcgtttacaaacctttagccagacagagcactgattga

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_7|449_aa
MNDRNEIQMEAKLQSLTIIAQEILCRFFITLRRHARFLLTKLGRQGMARSGITHSCAVCI
LCGPSREGDSPVAMGMTRMLLECSLSDKLCVIQEKQYEVIIVPTLLVTIFLILLGVILWL
FIREQRTQQQRSGPQGIAPVPPPRDLSWEAGHGGNVALPLKETSVENFLGATTPALAKLQ
VPREQLSEVLEQICSGSCGPIFRANMNTGDPSKPKSVILKALKEPAGLHEVQDFLGRIQF
HQYLGKHKNLVQLEGCCTEKLPLYMVLEDVAQGDLLSFLWTCRRDVMTMDGLLYDLTEKQ
VYHIGKQVLLALEFLQEKHLFHGDVAARNILMQSDLTAKLCGLGLAYEVYTRGAISSTQT
IPLKWLAPERLLLRPASIRADVYSIMKSCWRWREADRPSPRELRLRLEAAIKTADDEAVL
QVPELVVPELYAAVAGIRVESLFYNYSML

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_7|1350_bp
atgaatgataggaatgagattcaaatggaagccaaactccaaagtcttaccattatagca
caggaaattctatgcaggttctttattacccttaggagacatgcacgtttcctgctcact
aaactaggaaggcaaggaatggcaaggtcaggaattactcacagctgtgctgtgtgcatt
ctctgtgggcctagcagggaaggggacagccctgtggcaatgggcatgacacggatgctc
ctggaatgcagtctcagtgacaagttgtgtgtcatccaggagaagcagtatgaagtgatt
atcgtcccaactttgttggttactatcttcctcatccttcttggggtcatcctgtggctt
tttatcagagaacaaagaactcaacagcagcgttctggacctcaaggcattgcccctgtt
cctccacctagggacctaagctgggaagcaggacatggaggaaatgtggctttgccactt
aaggagacatccgtggaaaactttctgggagctaccacacctgccctggctaagctgcag
gtgccgcgggagcaactctctgaagttctggagcagatttgcagtggtagctgtgggccc
atctttcgagccaatatgaacactggggacccttctaagcccaagagtgttattctcaag
gctttaaaagaaccagctgggctccatgaggtacaagatttcttagggcgaatccaattc
catcaatacctggggaaacacaaaaacctggtgcagctggaaggctgctgcactgaaaag
ctgccactctatatggtgttggaggatgtggcccagggggacctgctcagctttctctgg
acctgtcggcgggatgtgatgactatggatggtcttctctatgatctcacagaaaaacaa
gtatatcacatcggaaagcaggtccttttggcgctggaattcctgcaggagaagcatttg
ttccatggggatgtggcagccaggaatattctgatgcaaagtgatctcactgctaagctc
tgtggattaggcctggcttatgaagtttacacccgaggggccatctcctctactcaaacc
atacctctcaagtggcttgccccagaacggcttctcctgagacctgctagcatcagagca
gatgtgtacagtatcatgaagtcctgctggcgctggcgtgaggctgaccgcccctcacct
agagagctgcgcttgcgcctagaagctgccattaaaactgcagatgacgaggctgtgtta
caagtaccagagttggtggtacctgaactgtatgcagctgtggccggcatcagagtggag
agcctcttctacaactatagcatgctttga

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_8|165_aa
MSIDQQQVQPLQLQQRFPVARVWRVPETSEPADFPSREPARTPSFAGSHAPQWEGGTEKH
FLEAGTPCPTQPCHYFPSDWAGAIGNRSDQRRDTVVNGVIVGIKTSIKEVCVKDKYQLRN
SRAGWIPKQIASLGLLAGLCSMQMCEESGFCARGGRDDTDQEYNI

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_8|498_bp
atgagtatagatcagcaacaagtccagcctttacagttgcagcagaggtttcctgtggct
cgagtgtggcgagtcccggaaacctcggagcccgcagacttcccttcgcgggagcccgcc
cgaactccatcctttgccggcagccacgccccgcagtgggaaggagggactgaaaagcat
ttccttgaggctggcacaccttgccctacccaaccctgtcattatttcccctccgactgg
gccggtgccatcggaaaccggagtgaccagaggagggacacggtagtgaacggggtaata
gtgggaatcaaaaccagtatcaaggaagtttgtgttaaagacaaatatcagttaaggaat
agcagagcagggtggattccaaagcagattgcttcacttggtttattggctggactgtgc
tccatgcagatgtgtgaagagtctgggttttgtgcaagaggaggaagagatgacacggat
caagaatataacatctaa

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_9|88_aa
MTGVLVRSNTRDMRAQGGGHLKKLQEEGRPSASHGEASVNQTCQHLDLGLPTSRPEKRNF
CRGEYSLLEETDKETTNEKRSGTEKKEG

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_9|267_bp
atgactggtgttcttgtgaggagcaacaccagagacatgcgtgcacaggggggtggccat
ttgaagaagttgcaagaggaaggaaggccatctgcaagccacggagaggcctcagtgaac
caaacctgccagcaccttgatcttggacttccaacctccagacctgagaaaaggaatttc
tgtcgtggagaatatagcctattagaagaaacagacaaggaaactacaaatgagaaacgc
tctggtaccgagaagaaagaaggatag

>gi568815586r:10506278_10713532|GENSCAN_predicted_peptide_10|246_aa
GAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPP
ATDRQFSGARNQLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHPNRIQSYPWSLPYPL
PHQQLLKPLNGQIKAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPRPAPAVG
EAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTENPAPPT
QQSSAE

>gi568815586r:10506278_10713532|GENSCAN_predicted_CDS_10|741_bp
ggtgcagaagctgccaatgtgactggcccggatggagttcctgtggaagggagtcgttac
gctgcagatcggcgccgttacagacgtggctactatggaaggcgccgtggccctccccgg
aattacgctggggaggaggaggaggaagggagcggcagcagtgaaggatttgacccccct
gccactgataggcagttctctggggcccggaatcagctgcgccgcccccagtatcgccct
cagtaccggcagcggcggttcccgccttaccacgtgggacagacctttgaccgtcgctca
cgggtcttaccccatcccaacagaatacagagttacccctggtctctcccttacccgtta
cctcaccaacaacttctaaagccattaaatgggcagatcaaggctggtgagattggagag
atgaaggatggagtcccagagggagcacaacttcagggaccggttcatcgaaatccaact
taccgcccaaggtaccgtagcaggggacctcctcgcccacgacctgccccagcagttgga
gaggctgaagataaagaaaatcagcaagccaccagtggtccaaaccagccgtctgttcgc
cgtggataccggcgtccctacaattaccggcgtcgcccgcgtcctcctaacgctccttca
caagatggcaaagaggccaaggcaggtgaagcaccaactgagaaccctgctccacccacc
cagcagagcagtgctgagtaa