GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:22:31

Sequence gi568815593f:123445664_123714393 : 268730 bp : 36.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  11597  12058  462  1  0   42   41   189 0.906   5.51
 1.02 PlyA +  12109  12114    6                               1.05

 2.02 PlyA -  13904  13899    6                               1.05
 2.01 Sngl -  23326  23054  273  1  0   69   44   300 0.997  18.78
 2.00 Prom -  26815  26776   40                              -2.35

 3.00 Prom +  51283  51322   40                              -3.85
 3.01 Init +  60875  60996  122  1  2   70   94    75 0.779   6.01
 3.02 Intr +  62725  62780   56  1  2   61   90    62 0.447   1.40
 3.03 Intr +  65705  65901  197  0  2   36   95    92 0.426   2.91
 3.04 Intr +  66318  66414   97  2  1   49   81    83 0.805   2.36
 3.05 Intr +  66631  66907  277  2  1   -3   88   202 0.574   6.75
 3.06 Intr +  99952 100178  227  1  2   60   82   317 0.845  25.01
 3.07 Intr + 127730 127878  149  0  2   94  119    48 0.048   7.53
 3.08 Intr + 142764 142848   85  2  1   96   95    51 0.089   5.07
 3.09 Intr + 144747 144895  149  1  2   22   97   110 0.084   4.33
 3.10 Intr + 159061 159167  107  0  2   73   55   112 0.165   4.49
 3.11 Intr + 171543 171604   62  0  2   50  110    34 0.004  -0.74
 3.12 Intr + 179946 180012   67  1  1   24   66   143 0.041   2.74
 3.13 Intr + 183371 183554  184  2  1   49   57    78 0.265  -0.33
 3.14 Term + 183686 183892  207  1  0   50   34   172 0.350   4.36
 3.15 PlyA + 184270 184275    6                               1.05

 4.00 Prom + 185107 185146   40                              -9.05
 4.01 Init + 188072 188284  213  1  0   63   20   153 0.885   4.79
 4.02 Intr + 190486 190737  252  0  0   62   42   201 0.951   9.61
 4.03 Intr + 190840 191344  505  0  1   42   29   829 0.514  64.02
 4.04 Intr + 191356 191559  204  2  0  -42   48   250 0.141   6.25
 4.05 Intr + 191606 191760  155  0  2  -66   42   232 0.117   2.07
 4.06 Term + 202765 202884  120  0  0   49   55   130 0.506   3.29
 4.07 PlyA + 202988 202993    6                               1.05

 5.04 PlyA - 204223 204218    6                               1.05
 5.03 Term - 212375 212253  123  2  0   75   48    87 0.021   0.80
 5.02 Intr - 230783 230484  300  2  0   18   86   128 0.093   1.61
 5.01 Init - 232644 231475 1170  0  0   44   41   515 0.171  35.97
 5.00 Prom - 232853 232814   40                              -9.85

 6.02 PlyA - 232958 232953    6                               1.05
 6.01 Sngl - 234015 233722  294  0  0   88   54   295 0.983  21.55
 6.00 Prom - 237517 237478   40                              -4.65

 7.00 Prom + 240741 240780   40                              -3.15
 7.01 Init + 248057 248063    7  1  1   88   81     2 0.119   0.60
 7.02 Intr + 254192 254354  163  0  1  102   57   121 0.145   8.51
 7.03 Intr + 260885 261009  125  2  2   43   95    93 0.149   4.81
 7.04 Term + 266061 266107   47  1  2  142   43     7 0.023  -2.01
 7.05 PlyA + 268477 268482    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 144752 144895  144  1  0   69   97   105 0.908   9.67
S.002 Term + 148189 148296  108  0  0   88   49    64 0.862   0.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_1|153_aa
MIISIDVEKAFDKIQQRFMLKTLNKLRIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIMLEVLTRAIRQEKEIKDIQLGKEEVKLSLFADDMIVYLENLIVS
AQNLLKLISNFSKVSGYTINVQKSQAFLYTNNR

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_1|462_bp
atgattatctcaatagatgtagaaaaggcctttgacaaaattcaacaacgcttcatgcta
aaaactctcaataaattacgtattgatgggacatatctcaaaataataagagctatctat
gacaaacccacagccaatatcatattgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacataatgttggaagtt
ctgaccagggcaattaggcaggagaaggaaataaaggatattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaacctcatcgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacacaatcaat
gtgcaaaaatcacaagcattcttatacaccaataacagataa

>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_2|90_aa
MRNNLSDSEEHSYITKAAKLKEKYEKDVADCKHKGKFDGTKHPTNIAWKKVEAEDEEDEE
NEEEEAVEEDDFKTIYLSLCEYLRIREDCN

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_2|273_bp
atgaggaataacttaagtgacagtgaagagcactcttacatcactaaggcagcaaaactg
aaggagaagtatgagaaggatgttgctgactgtaagcataaaggaaagtttgatggcaca
aaacatcctactaacattgcctggaaaaaggtggaagcagaagacgaagaagatgaggag
aatgaagaggaggaggcagtggaggaggatgactttaaaaccatttatctatctctatgt
gaatatcttagaatacgggaggattgtaattga

>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_3|661_aa
MFPVTPPPLLHTYRKAQPLITEQSETEKDSSKGNLSATRKSSYAESPTPNVMEFVGPLAE
VYQNDLSPSQGSNCKRENERNAVFLCRQSGLKCESETPISVCALQLDNLGDVWLLRTLGG
EFEKQKDGDRARLRLYTPCQPMTAPSPFRSAIRPIQEAEARAATLRPAAAVGGTSGSAGT
ESEQRCVTSLSRSFPPTSLARSLAPCVARFPPPAAGGCDVPPPLPPPALTDWGRRPRPGP
TPLLAAAPLSVLVLIKEFKVEYRKLDMENKKKDKDKSDDRMARPSGRSGHNTRGTGSSSS
GVLMVGPNFRVGKKIGCGNFGELRLDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD
RTFSLKTVLMIAIQLADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFE
KPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLVVSSTNGELNTDDPTAGRSNAPITAPT
EVEVMDETKCFKGFYKMALMVRYLLRDATGEYLQTEPPDVPWHQQERIASISPAKSPLQL
KPWQAQSLPAAPPPPPAPHPCDNTAMGVKLGTEKSGPFPTLSSHLHLGECSWRRPAPSTR
QYPATAEKKSTLLCCCCCHCCWHMQMRTDPAAATIQKALSGTIHQSAVTQWSRSTAALPV
Q

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_3|1986_bp
atgttccccgttactcctcctcccttactccacacctacaggaaggcacagcctctgatc
actgaacagagtgagacagaaaaagattcatcaaagggaaatctgagtgctactaggaaa
agttcatatgctgaatccccaaccccaaatgtgatggaatttgtagggcctttggcagaa
gtctaccaaaatgacttatctccatcccagggaagcaactgcaagagggaaaatgaaagg
aatgcagtctttctatgtaggcagagtggacttaagtgtgagtcagaaacaccgatttca
gtttgtgcgctgcaacttgataacttgggtgatgtttggcttctcagaactttgggaggt
gaatttgaaaaacagaaagacggggatagggcgcggcttaggctttatacaccttgccag
ccaatgaccgcgccgtctcctttccggtcggcgatccgaccaatccaagaagcagaggct
cgggcggcgactctccggccagcggcggcggtaggaggcaccagcggcagtgcagggacc
gaatccgagcagcgctgcgttacctctctctctcgctccttcccccctacctcgctcgct
cgctcgctcgctccctgcgtggctcgctttcctcctccggccgccggcgggtgtgatgtg
ccgccgccgctgcccccgccggcgctgacggactgggggcgccgcccgcgcccgggaccg
acccctctgctcgcggccgcgcctttgagtgtgcttgtcttgattaaagaattcaaagtg
gagtaccgcaaacttgatatggaaaataaaaagaaagacaaggacaaatcagatgataga
atggcacgacctagtggtcgatcgggacacaacactcgaggaactgggtcttcatcgtct
ggagttttaatggttggacctaactttagagttggaaaaaaaattggatgtggcaatttt
ggagaattacgattagatggtatacctcaagtttactatttcggcccttgtggtaaatac
aatgctatggtgctggaactgctgggacctagtttggaagacttgtttgacttgtgtgac
agaacattttctcttaaaacagttctcatgatagctatacaactggctgacacattaaag
gagaggtatcagaaaattggagatacaaaacgggctacaccaatagaagtgttatgtgaa
aattttccagaagaaatggcaacatatcttcgttatgtaagaaggctagatttttttgaa
aaaccagactatgactacttaagaaagctttttactgacttgtttgatcgaaaaggatat
atgtttgattatgaatatgactggattggtaaacagttggttgtaagttctacaaatgga
gagttaaacacagatgaccccaccgcaggacgttcaaatgcacccatcacagcccctact
gaagtagaagtgatggatgaaaccaagtgctttaagggattttacaaaatggcattaatg
gtacgctacttactgagggatgctacaggggagtacctgcagaccgaacctccagacgtg
ccctggcatcagcaggaacgcatagcttctattagccccgccaagtctccattgcagtta
aagccttggcaggcacagagcctgccagccgcacccccgcccccaccagcaccccacccc
tgtgacaacactgccatgggagtgaaactaggcacagagaagagtgggcctttccccacc
ctgagcagccatctccacctgggtgaatgctcatggaggaggccagcacccagcacccgc
cagtaccctgccacagcggagaagaagtccaccctgctctgctgctgctgctgccactgc
tgctggcacatgcaaatgagaacagatcctgctgctgccaccatacaaaaagctttgagt
ggcaccatccatcagagtgctgtgacacagtggtcccggagcactgcggcactgccagtg
cagtga

>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_4|482_aa
MEDNLDNIILNARIGKDFMIKMPKAIATKAKIDKCNLIKLKSFCTAKEAINEVDRQPTEW
EKSFATCHLTKRSLGSVQATSYGARLVSSTARVYAGAGGSGSRISVSRSTSFQGGLESGG
LAAGMAGGLAGIGGIQHEKETMQSLKDCLASYLDRTIQNLRIQIFANTVDNACIVLQIDN
ARLAADDFRVKYETELAMRQSVENDIHGLRNVIDDTVTRLQLETEIEAVKEELLFMKKNH
KEEAKSLQAQIASSGLMVEVDAPKSQDLAKVMADIRAQYDELAQKNGEELDKHWPQQIEE
STTVVTTQSAEVGAAETTLTELRLLGDDLDSMRNLKASLESEEQPEGGGGPLRPADGAVQ
WDPAAPGVRAGTDPGRGTAPGPGVGGPAERQDGEDFNFGDALDSSNSMQTIQKTTTTHRT
VDGKVVSETHDTKVLRHSANRSRTEEGSSWFVVQLKRKCKICSISALHYQTIDFRESTEN
VK

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_4|1449_bp
atggaagacaacctagacaacatcattctgaatgcaagaataggcaaagatttcatgata
aagatgccaaaagcaattgcaacgaaagcaaaaattgacaaatgtaatctaattaaacta
aagagcttctgcacagccaaggaagctatcaacgaagtggacaggcaaccaacagaatgg
gagaaaagttttgcaacgtgtcatctgacaaagcggtccctgggctctgtccaggcgacc
agctacggcgcccggctggtcagcagcacagccagagtctatgcaggcgccgggggctct
ggttcccggatctctgtgtcccgctccaccagcttccagggcggcttggagtccgggggc
ctggccgcggggatggccgggggtctggcaggaataggaggcatccagcacgagaaggag
accatgcaaagcctgaaagactgcctggcctcctacctggacagaaccatccagaacctg
aggattcagatcttcgcaaatactgtggacaatgcctgcatagttctgcagattgacaat
gcccgtcttgccgctgatgactttagagtcaagtatgagacagagctggccatgcgccag
tctgtggagaacgacatccacgggctccgcaatgtcattgatgacactgtcactcggctg
cagctggagacagagatcgaggctgtcaaggaggagctgctcttcatgaagaagaaccac
aaagaggaagcaaaaagcctacaagcccagattgccagctctgggttgatggtggaggta
gatgcccccaaatctcaggacctcgccaaggtcatggcagacatccgggcccaatatgac
gagctggctcagaagaacggagaggagctggacaagcattggcctcagcagattgaagag
agcaccacagtggtcaccactcagtccgccgaggttggagctgctgagacgacgctcacg
gagctgagacttcttggagatgacctggactccatgagaaatctgaaggccagcttggaa
tctgaagaacagcctgagggaggtggaggcccgctacgccctgcagatggagcagttcaa
tgggatcctgctgcacctggagtcagagctggcacagacccgggcagagggacagcgcca
ggcccaggagtaggaggacctgctgaacgtcaagatggcgaggacttcaattttggtgat
gctctggacagcagcaactccatgcaaaccatccaaaagaccaccaccacccaccggaca
gtggatggcaaagtggtgtctgagacccacgacaccaaagttctgaggcattcagccaac
agaagcaggactgaagagggcagcagttggtttgtggtacagctaaaacgcaaatgtaaa
atctgcagtatttctgcgctgcattaccagacaatagacttcagagaatccacagagaat
gtaaagtga

>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_5|530_aa
MVKGLIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTIITGDFNTPLSTLDRSTR
QKVNKDTQQLNSALHQADLIDIYRTLHPNSTEYTFFSAPHHTFSKIDHIVGSKALLSKCK
RTETIINFLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWIHKEMKAEIKMFFETNE
NKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITNIRAELKEIETQKTLQKINESRSWFFEKIKKIDRPLARLIKKKREKNQIDAIKNDKG
DIATNPTEIQTTIREYYKHLYANKLENLEEMEKFLDTYTLPRLNQEEVESLNRPITGFEI
EAIINSLPTKKSLGPDGFTAEFYQRYKEELLISNFSKVSGYTINVQKSQAFLYTINRQTE
SQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNDIKEDTNKWKNIPCSWVGRI
NIMKMAILPKGCLRNQGSTESSGEGHQWLLLSGQCLEQRITSSLFSFFTL

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_5|1593_bp
atggtaaagggattaattcaacaagaagaactaactatcctaaatatatatgcacccaat
acaggagcacccagattcataaagcaagtccttagtgacctacaaagagacttagactcc
cacacaataataacaggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagttaacaaggatacccagcaattgaactcagctttgcaccaagcagacctaata
gacatctacagaactctccaccccaattcaacagagtatacattcttttcagcaccacac
cacaccttttccaaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaa
agaacagaaactataataaactttctctcagaccacagtgcaatcaaactagaactcagg
attaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaat
gactactggatacataaagaaatgaaggcagaaataaagatgttctttgaaaccaacgag
aacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaa
ttcatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaaca
tcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaacatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgaaaagatcaagaaaattgatagaccactagca
agactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgacaaaggg
gatatcgccaccaatcccacagaaatacaaactaccatcagagaatactataaacacctc
tacgcaaataaactagaaaacctagaagaaatggaaaaattcctcgacacatacactctc
ccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctttgaaatt
gaggcaataattaatagcttaccaaccaaaaaaagtctaggaccagatggattcacagct
gaattctaccagaggtacaaagaggagctgctgataagcaacttcagcaaagtctcagga
tacacaatcaatgtgcaaaaatcacaagcattcttatacaccattaacagacaaacagaa
agccaaatcatgagtgaactcccattcacaattgcttctaagagaataaaatacctagga
atccaacttacaagggatgtgaaagacctcttcaaggagaactacaaaccactgctcaat
gacataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatc
aatatcatgaaaatggccatactgcccaagggttgtctcaggaaccaaggaagtacagag
tcatcaggagaaggacaccagtggctattactgtcagggcagtgcctggaacaacgcatt
acttcttccctcttcagcttcttcaccctatag

>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_6|97_aa
MGKKQSRKTRNSKNQSTSPPPKGHSSSPATEQSWTENDSDELREEGFRRSNYSELKEEVQ
ANGKEAKNFEKKLDERITRITNAEKSLKDLMELKTKA

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_6|294_bp
atggggaaaaaacagagcagaaaaaccagaaactctaaaaatcagagcacctctcctcct
ccaaagggacacagctcctcaccagcaacagaacaaagctggacagagaacgactctgac
gagttgagagaagaaggcttcagaaggtcaaactactccgagctaaaggaggaagttcaa
gccaatggcaaagaagctaaaaactttgaaaaaaaattagacgaacggataactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcatga

>gi568815593f:123445664_123714393|GENSCAN_predicted_peptide_7|113_aa
MPGKAYWVQCGTILRTRPWVLDYYCNREINIFHGCAHQQKEAAQAEALPLAFQITCGKKV
TKDPQSLVCGLVEENNPELGVKRQGFEVGLSVTKCENVGTLIIGVRAYLGNPG

>gi568815593f:123445664_123714393|GENSCAN_predicted_CDS_7|342_bp
atgcctggaaaggcttactgggtccagtgtggcaccatactaaggactcgaccctgggtc
cttgattattactgcaacagagaaattaatatcttccatggctgtgctcatcaacagaaa
gaagcagcacaagccgaggctctgcctctggccttccaaatcacatgtggtaagaaagtt
accaaggatcctcagtcactggtatgtggtcttgtagaggaaaataaccctgaattggga
gtcaagagacagggttttgaagttggtctctcagtcactaagtgtgaaaatgtaggcacg
cttatcattggagttagggcttacctgggtaatccaggatga