GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:49:53

Sequence gi568815589f:88326540_88575274 : 248735 bp : 44.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   5452   5447    6                               1.05
 1.02 Term -  31128  30964  165  0  0   96   47    67 0.532   1.32
 1.01 Init -  31888  31838   51  1  0   68   98    13 0.467   1.48
 1.00 Prom -  52513  52474   40                              -1.86

 2.04 PlyA -  52820  52815    6                               1.05
 2.03 Term -  60060  59889  172  2  1   77   54   169 0.870   9.70
 2.02 Intr -  60229  60193   37  2  1   70  100     3 0.806  -2.98
 2.01 Init -  62143  61687  457  1  1   75   85   140 0.419   6.37
 2.00 Prom -  64065  64026   40                              -3.76

 3.03 PlyA -  64352  64347    6                               1.05
 3.02 Term -  84348  83986  363  0  0  -22   43   290 0.930   8.07
 3.01 Init -  84971  84690  282  2  0   57   61   230 0.795  14.24
 3.00 Prom -  87232  87193   40                              -3.46

 4.00 Prom +  90652  90691   40                              -4.76
 4.01 Init + 108233 108290   58  1  1   71   63    63 0.027   1.57
 4.02 Intr + 122402 122450   49  0  1  104   82    55 0.076   4.24
 4.03 Intr + 135957 136210  254  0  2   46  111   116 0.773   6.78
 4.04 Intr + 141833 142066  234  0  0  100  100   140 0.980  14.06
 4.05 Term + 148539 148738  200  1  2   86   37   228 0.969  15.06
 4.06 PlyA + 150776 150781    6                               1.05

 5.00 Prom + 155960 155999   40                              -3.76
 5.01 Init + 170297 170395   99  1  0   54   95   127 0.927   8.27
 5.02 Intr + 208842 209197  356  2  2   88   73   680 0.766  60.59
 5.03 Intr + 212541 212810  270  0  0   92   34   103 0.590   1.96
 5.04 Term + 217840 218008  169  1  1  100   45   217 0.998  15.95
 5.05 PlyA + 218407 218412    6                               1.05

 6.00 Prom + 218716 218755   40                             -10.84
 6.01 Init + 220516 220585   70  0  1  116   93     0 0.321   4.52
 6.02 Intr + 229270 229313   44  2  2   62   93    41 0.087  -0.04
 6.03 Term + 232892 233035  144  1  0   38   42   171 0.246   5.41
 6.04 PlyA + 234858 234863    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  65122  64967  156  1  0   67   48   111 0.894   2.93
S.002 Init - 108911 108867   45  2  0  120   53    49 0.811   5.30
S.003 Term - 199224 198979  246  0  0   90   48   186 0.931  10.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:88326540_88575274|GENSCAN_predicted_peptide_1|71_aa
MISFNNRSHIQVTLMQKAQNHVEAAQVWGFHPEKPQPELYVGLFSAMFGAAGTQDTKSIG
STQHGYPGPGS

>gi568815589f:88326540_88575274|GENSCAN_predicted_CDS_1|216_bp
atgatctcctttaataacaggtctcacatccaggtcacactgatgcaaaaggctcaaaac
catgtggaagctgcccaggtttggggcttccaccctgagaagccacagcctgagctctat
gttggcctcttttctgccatgtttggagcagctgggacccaggacaccaagtccataggc
agcacacagcatgggtaccctgggcctggctcatga

>gi568815589f:88326540_88575274|GENSCAN_predicted_peptide_2|221_aa
MRAPPAGQCSAGPRAGRAHLRPRADRRTAGPPAARTPSRPTPALRGPHLLTAEAAVHRPT
GSAVARSRSRRPQPEPDGASPPPLPRRGRRPPPNSQGARALRPPNCDGRAAPAPGADGRL
RRRSGAGRGRRGRGLAPLTWLAAGRGSSPGLPVGSSPKQRGMGRRMFDSIPGLHPLDASS
THTPPKFTENVFKVKYVAPPSSPSPTPDLKFATGDDLIGSY

>gi568815589f:88326540_88575274|GENSCAN_predicted_CDS_2|666_bp
atgcgggcgccgcccgctggacaatgctccgccgggccccgcgcgggccgcgctcacctg
cgcccccgggcagaccgccgcaccgctggcccgcccgcagcccgcactccctcacgaccc
acgcccgccctgcgcgggcctcacctgctgaccgccgaggctgcagtccacaggcccacg
ggttccgccgtcgctcgttcgcgctcccgccggccccagcctgagccagacggcgcctcc
ccgcccccgctccctcgccgcggacgccgcccgccccccaacagtcagggcgcacgcgca
ctgcgcccgccgaactgcgacggccgcgccgccccggcgcctggcgccgacggccgactg
cgcaggcgcagtggggcggggcggggccggcgagggcggggcctggcccctctcacctgg
ctggcggcagggcggggctcgagcccgggactgccagtggggtcatctccgaaacaaaga
gggatgggaagaaggatgtttgacagcatccctggcctccacccactagatgccagtagc
acacacactcctccaaaattcacggaaaacgtcttcaaagtcaaatatgtggccccacct
tcatctccatccccaacccctgatttaaaatttgccactggtgatgatctcattgggagc
tattga

>gi568815589f:88326540_88575274|GENSCAN_predicted_peptide_3|214_aa
MDDAEASLKSLFSMPSCLSHKSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV
VMRDPNTKCSRGFEFVTYATVEVEDAAMNARPHKPKKLSDSGNVVVVEVVSVGMTTLVVE
ETSVVMVALVAVGMAIMDLVMVEAILEVVEATMILAITTISLQILDPRRKETLEAEALAP
MVVEANTMPNHETTVATMVVPVAAVAMAVAEDFN

>gi568815589f:88326540_88575274|GENSCAN_predicted_CDS_3|645_bp
atggatgacgctgaagcatcattaaagtctctcttctccatgccatcatgtctaagtcac
aagtctcctaaagagcccgaacagctgaggaagctcttcattggagggttgagctttgaa
acaaccgatgagagcctgaggagccattttgagcaatgggggacactcacggactgtgtg
gtaatgagagatccaaacaccaagtgctccaggggctttgagtttgtcacatatgccact
gtggaggtggaggatgcagccatgaatgcaaggccacacaagccaaagaagctaagtgat
tctggaaacgtggtggtcgtggaggtggtttcagtgggaatgacaactctggtagtggag
gaaacttcagtggtcatggtggctttggtggcagtggggatggctataatggatttggta
atggtggaagcaattttggaggtggtggaagctacaatgattttggcaattacaacaatc
agtcttcaaattttggacccacgaaggaaggaaactttggaggcagaagctctggcccct
atggtggtggaggccaatactatgccaaaccatgaaaccacggtggctactatggtggtt
ccagtagcagcagtagctatggcagtagcagaagattttaattag

>gi568815589f:88326540_88575274|GENSCAN_predicted_peptide_4|264_aa
MSCARLLMPVIPTLWEAEAGHAGVSANMMKKRTSHKKHRSSVGPSKPVSQPRRNIVGCRI
QHGWKEGNGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELNKDERVSALEVLPDRV
ATSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPVMNTWFYITYEKDPVLYM
YQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEA
KPSVYFIKFDDDFHIYVYDLVKTS

>gi568815589f:88326540_88575274|GENSCAN_predicted_CDS_4|795_bp
atgagctgcgcgcggttgctcatgcctgtaatcccaacactctgggaggccgaagcgggc
catgctggagtatctgccaacatgatgaagaagaggacatcccacaaaaaacatcggagc
agtgtgggtccgagcaaacctgtttcccagccccggcggaacatcgtaggctgcaggatt
cagcatgggtggaaagaggggaatggccctgttacccagtggaaaggaaccgttctggac
caggtgcctgtaaatccttctttgtatcttataaaatacgatggatttgactgtgtttat
ggactagaacttaataaagatgaaagagtttctgcgcttgaagtcctccctgatagagtt
gcgacatctcgaatcagcgatgcacacttggcagacacaatgattggcaaagcagtggaa
catatgtttgagacagaggatggttctaaagatgagtggaggggaatggtcttagcacgt
gcacctgtcatgaacacatggttttacattacctatgagaaagaccctgtcttgtacatg
taccaactcttagatgattacaaagaaggcgaccttcgcattatgcctgattccaatgat
tcacctccagcagaaagggaaccaggagaagttgtggacagcctggtaggcaaacaagtg
gaatatgccaaagaagatggctcgaaaaggactggcatggtcattcatcaagtagaagcc
aagccctccgtctatttcatcaagtttgatgatgatttccatatttatgtctacgatttg
gtgaaaacatcctag

>gi568815589f:88326540_88575274|GENSCAN_predicted_peptide_5|297_aa
MGLARESGLALHVPLCCLLPVSKMDMDERRKQKVIILLQVSSGLRWLRVCAMVDILGERH
LVTCKGATVEAEAALQNKVVALYFAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVF
VSADGSSQEMLDFMRELHGAWLALPFHDPYRHWCRGCRKPWKTAVGLANLSKHKPPDLGH
CPSVRGGEIAFLMSFQVMLVLLLLGPHIVPDSAGQRLVHGPMSVGNLSGVQMLSDLGVLR
NLELRKRYNVTAIPKLVIVKQNGEVITNKGRKQIRERGLACFQDWVEAADIFQNFSV

>gi568815589f:88326540_88575274|GENSCAN_predicted_CDS_5|894_bp
atggggctcgcccgagagtcaggcctggctcttcacgttcccttgtgctgcctccttccc
gtgtccaaaatggacatggatgagagaaggaagcaaaaggtgatcatcctcctgcaggtg
tcctcgggtctcaggtggctgcgtgtctgcgccatggttgacattctgggcgagcggcac
ctggtgacctgtaagggcgcgacggtggaggccgaggcggcgctgcagaacaaggtggtg
gcactgtacttcgcggcggcccggtgcgcgccgagccgcgacttcacgccgctgctctgc
gacttctatacggcgctggtggccgaggcgcggcggcccgcgcccttcgaagtggtcttc
gtgtcagccgacggcagctcccaggagatgctggacttcatgcgcgagctgcatggcgcc
tggctggcgctgcccttccacgacccctaccggcattggtgcaggggatgcagaaagccc
tggaagactgctgtgggattggccaacttgagcaagcataaaccaccagatcttgggcac
tgccccagcgtcagaggtggggagattgcatttctgatgagtttccaggtgatgttggtg
ttgctgctcctgggaccccatattgttcctgacagtgctggtcaaaggctggtgcatgga
cccatgtcagttgggaatctgtcaggagtgcagatgctgtcggacctgggggtgctcagg
aatcttgagctgaggaagaggtacaacgtcacagccatccccaagcttgtgattgtgaaa
caaaatggggaggtcatcaccaacaaagggcggaagcagatccgggaacgggggttggcc
tgcttccaggactgggtggaggcggccgatatcttccagaatttctccgtttga

>gi568815589f:88326540_88575274|GENSCAN_predicted_peptide_6|85_aa
MGQGLKDMQHRDPAQAHVSSRLPDPSPSVGKPGAERQKNLSFMTSQHLVLAPPTATTANR
IAKGFLATKHVHLLDLIPAIRRPVP

>gi568815589f:88326540_88575274|GENSCAN_predicted_CDS_6|258_bp
atggggcaggggttgaaagacatgcagcatcgtgacccagcccaggcccacgtctcatcc
agactccctgatccttcaccttctgtgggcaagccaggtgcagagcggcaaaagaatctg
tccttcatgaccagccagcatctggtacttgcccctccaacagcaacaacagcaaatcga
attgcaaagggcttcctcgctaccaagcacgttcacttgctcgacctcatccctgccatc
cgtaggcctgtcccttga