GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:13:06

Sequence gi568815597r:229225238_229442465 : 217228 bp : 44.66% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1636   1631    6                               1.05
 1.02 Term -   7286   7105  182  0  2   64   46    83 0.671  -0.53
 1.01 Init -   9249   9189   61  0  1   76   63    79 0.840   5.61
 1.00 Prom -   9972   9933   40                              -5.26

 2.04 PlyA -  10196  10191    6                               1.05
 2.03 Term -  19297  19145  153  1  0   52   47    94 0.007  -0.38
 2.02 Intr -  43196  43006  191  0  2   53   91    64 0.406   2.50
 2.01 Init -  46119  45723  397  0  1   93   75   188 0.444  12.87
 2.00 Prom -  48631  48592   40                              -2.36

 3.00 Prom +  56589  56628   40                              -6.06
 3.01 Init +  70171  70280  110  0  2   69   81   100 0.741   7.09
 3.02 Intr +  72245  72354  110  2  2   50  -21   151 0.010   0.33
 3.03 Intr +  73740  73835   96  1  0   95   98    42 0.015   5.88
 3.04 Intr +  86179  86294  116  2  2   25   84   113 0.003   4.77
 3.05 Intr + 101209 101271   63  0  0  104   28    77 0.028   2.21
 3.06 Intr + 101659 101696   38  0  2  106   68    11 0.052  -2.04
 3.07 Term + 104967 105258  292  0  1   75   43   210 0.113  10.02
 3.08 PlyA + 105658 105663    6                               1.05

 4.06 PlyA - 106555 106550    6                               1.05
 4.05 Term - 116254 116103  152  2  2  102   42    95 0.898   4.37
 4.04 Intr - 117276 116862  415  0  1   70   80   691 0.869  60.18
 4.03 Intr - 117561 117426  136  2  1   86   76   -17 0.511  -2.53
 4.02 Intr - 117808 117675  134  1  2   75   94    65 0.912   5.24
 4.01 Init - 120140 120042   99  2  0   63   64    61 0.559   1.46
 4.00 Prom - 129209 129170   40                              -5.56

 5.00 Prom + 141128 141167   40                              -2.86
 5.01 Init + 142984 143041   58  0  1   74   88    27 0.598   2.85
 5.02 Intr + 151448 151487   40  0  1  104  101     4 0.293   0.58
 5.03 Intr + 152260 152471  212  1  2  101   42    59 0.151   1.16
 5.04 Term + 153687 153805  119  1  2   73   44   124 0.214   5.20
 5.05 PlyA + 157963 157968    6                               1.05

 6.00 Prom + 169313 169352   40                              -2.46
 6.01 Init + 178067 178120   54  1  0   88   95   -28 0.153  -0.82
 6.02 Intr + 182507 182631  125  1  2   42  116   143 0.890  11.88
 6.03 Intr + 186271 186355   85  1  1  133   73    15 0.617   4.32
 6.04 Term + 190428 190622  195  2  0   55   33   109 0.251  -0.49
 6.05 PlyA + 191403 191408    6                               1.05

 7.08 PlyA - 192111 192106    6                               1.05
 7.07 Term - 206405 206262  144  2  0   88   42   316 0.999  24.91
 7.06 Intr - 206665 206484  182  2  2  105   98   366 0.999  38.89
 7.05 Intr - 206948 206757  192  0  0  128   97   522 0.999  56.56
 7.04 Intr - 207194 207033  162  0  0   92   85   406 0.999  40.65
 7.03 Intr - 207643 207319  325  1  1   85  117   668 0.999  64.75
 7.02 Intr - 207890 207750  141  2  0  101   71   274 0.989  27.55
 7.01 Intr - 209712 209530  183  0  0   79   40    77 0.246   1.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  63149  63246   98  0  2   75   39   116 0.864   3.53
S.002 Term +  72245  72407  163  2  1   50   43   193 0.984   8.41
S.003 Term - 100174  99998  177  1  0   71   43   126 0.809   4.09
S.004 Init - 103054 102982   73  1  1   67   49    37 0.868  -1.07
S.005 Term - 155799 155684  116  1  2   73   51   152 0.940   8.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_1|80_aa
MGDENFRVLENALNNNCQRKEHCGDGEASLENANKGSTVEMAEQLEKRNQGLRSCAAAIP
ALTYYLPGRLGDRAIDIYLV

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_1|243_bp
atgggggatgaaaacttcagggtgctggaaaatgctcttaacaacaactgccagagaaaa
gaacattgtggggacggggaagccagtttggagaatgccaacaagggcagcaccgtagag
atggcagagcaactggaaaagaggaaccagggtcttagatcctgtgcagctgccattcca
gccttgacttactatttgcctggacgactgggagacagagcaatagacatctatcttgtt
taa

>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_2|246_aa
MAVCDILGAAPPLAGSPAALARGPPARLGGEGPGAGDRRREGPDRSPRQPPVSQRLRPSR
TPAPRRRRALHPPSGRDREEEEEMGYARPGPPRVRACARGGRGGAREDFGARRKHVRGLG
ALAVCAEVGRAAGNIQSEWARLTAVMQISQPIYDLRSKVPRSDYLSTPTSRDLLMGPPRP
RLTECVLSKCISTITQCCEPLKGTEIVHSRSSDFKAVACQCSQLNKALPSTTWCLTGFVC
GSSCYN

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_2|741_bp
atggccgtctgcgacatcttgggagcggcgccgcctctcgccgggtcaccggctgcactc
gcccgcggtccgccggcgcgtctcggtggggaaggacctggggcgggggaccggaggagg
gaggggcccgaccggtccccacggcaaccgccggtctcccagcggctgcggcccagccgg
actccagctccgcgcaggcgcagggccctccaccctccgtccggccgcgaccgcgaggag
gaagaggagatgggctacgcgaggcccggcccaccccgcgttcgcgcgtgcgcacgggga
ggccggggcggggcgcgtgaggacttcggcgcgcgccggaagcacgtgcgcgggctgggc
gctctggcggtgtgcgctgaggtgggcagagcggcagggaatattcagtcagaatgggct
agattaactgcagtaatgcagatctctcaacccatttatgacttacgcagcaaagttcct
cgctcagactacctgtccactcccacgagcagagacttgctcatgggccctcctagaccc
aggctgaccgagtgtgttttatctaaatgcatctccacaatcactcagtgttgtgagccc
ttaaaagggacagaaattgtgcactcgagaagctcggattttaaggcagtagcttgccaa
tgctcccagctgaataaagcccttccttctacaacttggtgtctgacaggttttgtctgc
ggctcgtcctgctacaattga

>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_3|274_aa
MDSCGDYGFHRAERWRELEEMEKIVPGSGVDEELAENRETYNALTNWLTDARMLASQNIV
IILCGNKKDLDADQLMFLETSALTGENVEEAFVQCARKILNKIESGLFHGWVTLHGKGIL
ELGFKETFSYVVIVESTDDKRGLSELVNPNSIYIFAWLGVTKLFWQIRHLVAVEAQYWCS
EWMVMLSSDIGPLKDEERVLVTLDARHSWSRQPDLQLELRREDGMEMKATAPGVDQVTQK
KHRAGRQEVQTGPGTPSFNAQAKKGEPEMGAEEG

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_3|825_bp
atggattcctgtggtgactatggattccaccgcgccgagaggtggcgagaactggaagag
atggagaaaattgtgccagggagtggggtagatgaggagctcgcagagaaccgagaaacc
tacaatgcgcttactaattggttaacagatgcccgaatgctagcgagccagaacattgtg
atcatcctttgtggaaacaagaaggacctggatgcagatcagctgatgtttttggaaaca
agtgcgctcacaggggagaatgtagaagaggcttttgtacagtgtgcaagaaaaatactt
aacaaaatcgaatcaggtttgttccatggctgggtgacactacacggcaaaggaatactt
gagctgggcttcaaggaaacatttagctatgtggtcattgtagaaagcacagatgacaaa
cgggggctgagtgaacttgtgaaccccaactccatctacatctttgcctggcttggtgtc
actaaactcttctggcaaataaggcacttggttgctgtcgaggctcagtactggtgttct
gagtggatggtcatgctgtcctctgacataggccccctaaaggatgaggaaagggtgctt
gtcacgttggatgcaagacactcctggtcccggcagccagaccttcaactggagctcagg
agagaagatggcatggagatgaaagccacggctcctggtgtggaccaagtcacccagaag
aaacacagagccggaagacaggaggtgcaaacaggcccggggacaccgtcatttaatgca
caggcaaagaaaggagaacccgagatgggagcagaggaagggtag

>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_4|311_aa
MQQEMYMTLRCQSRLLEDVTKTAQPTAHPTASYLERGPPRRHLAQEESARESELRFSCCA
TRASGLGAEDRPGAAGRSPSLLRSPRPSPQPPCLPPTEQPSSAARPSTPAAPVPASALGP
GRRAAGSEERLALEAADGTMSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLE
QAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAP
EEQDAEAGDAEAEDAEDAALPDPKAPVALRVFSRHGPFTFFPAQRLAGLGTQLNASVQPG
VTNGSFQITGF

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_4|936_bp
atgcagcaggagatgtatatgaccttgagatgccagtccaggcttctggaggatgtgacc
aagacggcccagcccacagcccaccccactgccagttatctggagcgcgggccgccgcgg
cgacatcttgctcaggaggaaagcgcgcgggagagcgagctgcgctttagctgctgcgcc
acgcgcgcctcgggcctgggcgcagaggatcggccgggcgcggcgggaaggagccccagt
ctcctgcggtcccctcgccccagcccgcagcctccctgccttccgcccactgagcagccc
tcctcggcggcgcgcccctcgaccccagcagccccggtccccgcctctgctcttggtccc
ggccgccgggctgcgggcagcgaggagcggctggcgctcgaggcggcggacggcaccatg
tccccggggagcggggtgaagagcgagtacatgaagcgctaccaggagccgcgctgggag
gagtacgggccgtgctaccgcgagctgctgcactaccgcctaggccgccggctgctggag
caggcgcacgcgccctggctctgggacgactggggcccggccggctcctcggaggactcg
gcgtcgtcagagtcgtcgggcgccgggggccccgcaccccggtgcgccccgccctcgccc
ccgccgcccgtagagccggcgacccaggaggaggcggaacggcgggcgcgcggggccccg
gaggagcaggacgcggaggccggggacgcggaggccgaggacgcggaggacgcggctctg
ccagatccgaaagcgccggtggcgctgcgcgtgttttcaaggcatggccccttcaccttc
tttcctgcccagaggcttgcagggctggggacccagttgaacgcctcagtacagcctgga
gtaaccaatggttccttccagatcactggattttaa

>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_5|142_aa
MVPGSASGEGFRLLLFVVRGQKDKEEPPSRPLREKGSLSLTHGGALSGHLCTGPLQGQMR
QPEQNPLPAWPTKEPTTLHLAQPQPKAAPTRCAFRDLPGPLECESGITVIFPCHFKTYEY
MPPVATQQYIIEHKQYLTDPSC

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_5|429_bp
atggtgccaggatctgcttctggggagggcttcaggctgctgctattcgtggtgagaggg
cagaaagataaagaggagcctccctccaggcctctgcgggagaagggaagtctctccctc
acccatgggggagcactgagtggccacctctgcacaggccctctgcaggggcagatgagg
cagcccgaacagaaccctctgcccgcctggccaaccaaagagcccacgacactccatctg
gcccaaccgcagccgaaggcggcaccaactcgctgcgccttcagggacttgccagggcca
cttgagtgtgaatctggcatcacagtcattttcccatgtcacttcaaaacctatgagtat
atgcctccagtggccacacagcagtacatcatagagcacaagcagtacctcacagaccca
tcatgctag

>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_6|152_aa
MEHILSTSPHVPSAWPHLERHPSRIRPRTPQLGTLTRLSRGFSGIRLQGNQLFAQTFKPS
PRAQAFKQTLGPARLFEQVSHIYHSLEAPLFTFTWTNPDTHQAQQITWAVLLQGFTDIPH
YFSQAQISTSSVTYLGIILIKTLVLSLLIVSG

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_6|459_bp
atggagcacatattaagcacctcaccccacgtgccctcagcatggccccacctggaaagg
caccctagccggattcgccctcggacgccccagctgggcacactcacgcggctctcccgc
ggcttctcgggaattcgcctccagggcaatcagctcttcgcacaaacgttcaaaccaagc
cccagagcacaggccttcaagcagaccctgggtccagccaggctttttgagcaggtttct
catatttatcattccctcgaggcacctctcttcactttcacttggactaatcctgacacc
catcaggctcagcaaattacctgggctgtactgctgcaaggcttcacagacatcccccat
tacttcagtcaagcccaaatttcaacctcatctgttacctatctcggcataattctcata
aaaacactcgtgctctccctgctgatcgtgtccggctaa

>gi568815597r:229225238_229442465|GENSCAN_predicted_peptide_7|442_aa
ETQGRCASLRRTAPCAQALRLTGLSPGAPAPPPRRSALASPRQLSILRQLRALRPPVALC
AKLDTMCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
VGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPK
ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPH
AIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASS
SSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDL
YANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
QMWITKQEYDEAGPSIVHRKCF

>gi568815597r:229225238_229442465|GENSCAN_predicted_CDS_7|1329_bp
gagacccaagggcgctgcgcgtccctgaggcggacagctccgtgtgctcaggctttgcgc
ctgacaggcctatccccgggagcccccgcgcctcctccccggcgctccgccctcgcctcc
ccccgccagttgtctatcctgcgacagctgcgcgccctccggccgccggtggccctctgt
gcgaaactagacacaatgtgcgacgaagacgagaccaccgccctcgtgtgcgacaatggc
tccggcctggtgaaagccggcttcgccggggatgacgcccctagggccgtgttcccgtcc
atcgtgggccgcccccgacaccagggcgtcatggtcggtatgggtcagaaagattcctac
gtgggcgacgaggctcagagcaagagaggtatcctgaccctgaagtaccctatcgagcac
ggcatcatcaccaactgggatgacatggagaagatctggcaccacaccttctacaacgag
cttcgcgtggctcccgaggagcaccccaccctgctcaccgaggcccccctcaatcccaag
gccaaccgcgagaagatgacccagatcatgtttgagaccttcaacgtgcccgccatgtac
gtggccatccaggccgtgctgtccctctacgcctccggcaggaccaccggcatcgtgctg
gactccggcgacggcgtcacccacaacgtgcccatttatgagggctacgcgctgccgcac
gccatcatgcgcctggacctggcgggccgcgatctcaccgactacctgatgaagatcctc
actgagcgtggctactccttcgtgaccacagctgagcgcgagatcgtgcgcgacatcaag
gagaagctgtgctacgtggccctggacttcgagaacgagatggcgacggccgcctcctcc
tcctccctggaaaagagctacgagctgccagacgggcaggtcatcaccatcggcaacgag
cgcttccgctgcccggagacgctcttccagccctccttcatcggtatggagtcggcgggc
attcacgagaccacctacaacagcatcatgaagtgtgacatcgacatcaggaaggacctg
tatgccaacaacgtcatgtcggggggcaccacgatgtaccctgggatcgctgaccgcatg
cagaaagagatcaccgcgctggcacccagcaccatgaagatcaagatcatcgccccgccg
gagcgcaaatactcggtgtggatcggcggctccatcctggcctcgctgtccaccttccag
cagatgtggatcaccaagcaggagtacgacgaggccggcccttccatcgtccaccgcaaa
tgcttctag