GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:37:40

Sequence gi568815590r:100158559_100388174 : 229616 bp : 39.72% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3721   3862  142  2  1   72  115   100 0.487   9.59
 1.02 Intr +   7256   7415  160  2  1   81   71   177 0.953  14.37
 1.03 Intr +  19258  19383  126  0  0   85  102    49 0.879   5.96
 1.04 Intr +  24817  24878   62  0  2   79   44    22 0.623  -6.49
 1.05 Intr +  25398  25504  107  0  2   51   91    87 0.944   4.24
 1.06 Intr +  26070  26175  106  1  1   32   99   139 0.953   7.75
 1.07 Intr +  28562  28692  131  2  2   80   60    81 0.688   3.92
 1.08 Intr +  32832  32938  107  1  2   46  115   130 0.672  10.51
 1.09 Intr +  45198  45329  132  2  0   31  100   145 0.008   9.92
 1.10 Intr +  47562  48131  570  2  0   62   67   400 0.575  27.33
 1.11 Term +  48288  48554  267  2  0  -13   47   282 0.351   8.51
 1.12 PlyA +  50725  50730    6                               1.05

 2.00 Prom +  51787  51826   40                              -7.45
 2.01 Init +  54495  54870  376  2  1   53   96   358 0.308  28.64
 2.02 Intr +  55261  55360  100  2  1   45   97    61 0.830   0.95
 2.03 Intr +  61721  61873  153  2  0   81   91   123 0.788  10.17
 2.04 Intr +  66615  66781  167  0  2   46   75   169 0.984  10.08
 2.05 Intr +  72598  72734  137  2  2  122  -42    99 0.743  -0.33
 2.06 Intr +  74872  74979  108  0  0    6  100   180 0.702  10.56
 2.07 Intr +  80682  80846  165  2  0   81   53    88 0.697   3.84
 2.08 Intr +  81845  82213  369  1  0   46  115   267 0.975  19.58
 2.09 Intr +  82333  82451  119  0  2   99    2    91 0.508  -0.06
 2.10 Intr +  84905  84996   92  2  2   75   76    50 0.410   1.22
 2.11 Term +  86037  86197  161  1  2  150   32    65 0.517   4.22
 2.12 PlyA +  90047  90052    6                               1.05

 3.09 PlyA -  90968  90963    6                               1.05
 3.08 Term - 100688  99998  691  1  1   71   47   620 0.996  48.27
 3.07 Intr - 101439 101296  144  2  0   54   80   168 0.996  11.08
 3.06 Intr - 103197 102984  214  1  1   24   89   123 0.328   2.85
 3.05 Intr - 105637 105476  162  2  0  107   97   158 0.918  17.63
 3.04 Intr - 106227 106113  115  0  1   46   82   155 0.997   9.80
 3.03 Intr - 110420 110227  194  0  2   81   93   100 0.816   8.09
 3.02 Intr - 116603 116395  209  1  2   83   68   127 0.985   8.00
 3.01 Init - 129523 128943  581  1  2   63   86   192 0.685  11.17
 3.00 Prom - 143925 143886   40                              -3.45

 4.00 Prom + 148675 148714   40                              -6.25
 4.01 Init + 151645 151706   62  0  2   93   -1   160 0.341   6.37
 4.02 Intr + 151981 152077   97  1  1   91   38   112 0.011   5.59
 4.03 Intr + 157639 157726   88  0  1   67   84    71 0.367   3.22
 4.04 Intr + 158226 158382  157  1  1   61   89    58 0.081   1.35
 4.05 Term + 166053 166155  103  0  1   68   36   101 0.022  -0.33
 4.06 PlyA + 168027 168032    6                               1.05

 5.06 PlyA - 168194 168189    6                               1.05
 5.05 Term - 175725 175572  154  2  1   70   49   138 0.246   4.51
 5.04 Intr - 185228 185106  123  1  0   41   46   124 0.047   2.28
 5.03 Intr - 191641 191608   34  2  1   68   85    41 0.042  -1.84
 5.02 Intr - 196013 195753  261  0  0   76   89    87 0.151   4.14
 5.01 Init - 196250 196211   40  2  1   58   86    46 0.156   1.80
 5.00 Prom - 208101 208062   40                              -3.35

 6.00 Prom + 225445 225484   40                              -3.35
 6.01 Init + 226299 226448  150  2  0   79   89    48 0.759   4.09
 6.02 Term + 227922 228062  141  2  0  111   39   218 0.982  16.15
 6.03 PlyA + 228209 228214    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:100158559_100388174|GENSCAN_predicted_peptide_1|636_aa
XMTTKDYPSLWGFGTTKTFKIPIEHLDFKYIEKCSDVKHLEKILCVLRSGEEGYYPELTE
FCEKHLQALAPESRALRKDKPAATAASFTAEEWEKIDGDIKSWVSEIKKEEDKMHFHETE
TFPAMKDNLPPVRGSNSCLHVGKEKYSKRPTKKKTPRDYAEWDKFDVEKECLKIDEDYKE
KTVIDKSHLSKIETRIDTAGLTEKEKDFLATREKEKGNEAFNSGDYEEAVMYYTRSISAL
PTVVAYNNRAQAEIKLQNWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKLREATEDL
SKVLDVEPDNDLAKKQILSLKSAKIALSESLISCRERAEIVEKQTQALIMRVADLQQKKT
DGSWSITVDYCKLNQVVTPIAAAVPDMVSLLEQINTSPGTWYAATDLANVFFSIPVHKAH
QKQSAVSWQGYQYTFTVLPQGYINSAALCHSLIRKDLDCFLLWQDITLVHYIDDVMLTGP
SEQEVANTLDLLVRHLHARGWEINPTKIQGPSTSVKFPGFRWYGACRDIPSKVKQDIPSK
VKEDIPSKGPEQEKALPQVQAAVQAALPLGPYDLADPMVLEVSVADRDAVWSLWQAPIDE
SQWRPLGFWSKALPSSADNCFPLETALGLLLGFGGN

>gi568815590r:100158559_100388174|GENSCAN_predicted_CDS_1|1911_bp
nctatgaccaccaaagattatccatcattgtggggctttggaacaacaaaaacattcaaa
attcccattgaacatctagatttcaaatacattgaaaaatgttcagatgttaaacatctg
gaaaaaattctttgcgtgctcagatctggtgaggaaggatattatcctgaacttacagaa
ttttgtgaaaagcatcttcaagccttggcccctgaaagcagagctttgaggaaagataaa
ccagcagcaacagcagccagttttacagctgaagaatgggaaaaaattgatggtgatata
aagagttgggtatcagaaattaaaaaagaagaagataaaatgcactttcatgaaactgag
acatttccagcaatgaaagataatttgcctccagttcgtggttcaaacagctgtcttcat
gtaggcaaggaaaaatattctaaaagaccaactaaaaagaaaactccaagggattacgcg
gaatgggataaatttgacgtggagaaggaatgtttaaaaattgatgaagattacaaagaa
aagacggtaatagacaagtcacacttgtctaaaattgagacaagaatagatacagcaggt
ctaactgagaaagaaaaggattttcttgccactcgtgaaaaggagaaaggaaatgaagct
ttcaactcaggagattatgaagaagcagtgatgtattataccaggagcatatcagcgctt
cccactgtagttgcctataacaatcgagctcaagcagaaatcaaattacagaactggaat
agtgcttttcaggattgtgaaaaggtcttggagttagaacctggaaacgtaaaggctctt
ctgcgtcgtgctactacatataaacatcaaaacaagctccgggaagctacagaagatttg
agtaaagtactagatgttgagcctgataatgatttggccaagaagcagatactgagcctc
aaatctgccaagattgccctgagtgagagtcttatctcctgtagagaaagagctgaaatt
gtggaaaaacagacacaagctctcatcatgcgagtggctgacctgcaacaaaagaagacc
gatggatcttggagcataacagtggattattgtaagcttaaccaagtggtgactccaatt
gcagctgctgtaccagatatggtttcattgcttgagcaaattaacacatctcctggtacc
tggtatgcagccactgacttggcaaatgtctttttctccattcctgtccataaggcccac
cagaagcaatctgccgtcagctggcaaggttaccaatatacctttactgtcctacctcag
gggtatatcaactctgcggctttgtgtcatagtcttattcggaaagaccttgattgcttt
ttgctttggcaagatatcacactggtacattatattgatgacgttatgctgactggacct
agcgagcaagaagtagcaaacacactggacttattggtgagacatttgcatgcaagagga
tgggaaataaatccaactaaaattcagggaccttctacctcagtaaaatttcctgggttc
cggtggtatggggcctgtcgagatattccttctaaggtgaagcaagatattccttctaag
gtgaaggaagatattccttctaagggtccagaacaggagaaggctctgccacaggtccaa
gctgctgtgcaagctgctctgccacttgggccatatgacctagcagatccaatggtgctt
gaggtgtcagtggcagatagggatgccgtttggagcctttggcaggcccccatagatgaa
tcacagtggaggcctctaggattttggagcaaggccctgccatcttctgcagataactgc
tttcctcttgagacagctcttggcctgttactgggctttggtggaaactga

>gi568815590r:100158559_100388174|GENSCAN_predicted_peptide_2|648_aa
MQTLTSRIHFLTEPAEPAGAARAAQPCVMGNIQKKLTGKAEGGKRPARGAPQRGQTPEAG
ADKRSPRRASAAAAAGGGATGHPGGGQGAENPAGLKSQGNELFRSGQFAEAAGKYSAAIA
LLEPAGSEIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYET
LEQYGKAYVDYKTVLQIDCGLQLANDSVNRLSRILMELDGPNWREKLSPIPAVPASVPLQ
AWHPAKEMISKQAGDSSSHRQQGITDEKTFKALKEEGNQCVNDKNYKDALSKYSECLKIN
NKECAIYTNRQLCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQKSLIDLNKVI
LLDPSIIEAKMELEEVTRLLNLKDKTAPFNKEKERRKIEIQEVNEGKEEPGRPAGEVSMG
CLASEKGGKSSRSPEDPEKLPIAKPNNAYEFGQIINALSTRKDKEACAHLLAITAPKDLP
MFLSNKLEGDTFLLLIQSLKNNLIEKDPSLVYQHLLYLSKAERFKMMLTLISKGQKELIE
QLFEDLSDTPNNHFTLEDIQALKRQCLTDTVTIHALNGTRCSLKLRLHLSHSSTKGLSSE
NNTFSFMSAISPFSSLPSCQPINLRSYSSPKEKSQPFIFPYTIAFKTG

>gi568815590r:100158559_100388174|GENSCAN_predicted_CDS_2|1947_bp
atgcaaaccctcacttcccgcatccacttcctcacagagcccgcggagccggcgggagcc
gcgcgcgccgcccagccgtgcgtcatgggcaacatccagaagaagctgactggcaaagcc
gaaggcggcaagcggccggcaaggggcgcgccgcagcggggccagaccccggaggccggc
gcggacaagcggagcccacggcgggcctctgcggcggcggcggcgggcggcggcgccacc
gggcatccgggcggcgggcagggcgcggagaaccctgccggcctgaagagccagggcaac
gagctgttccgaagcgggcagttcgccgaggcggccggcaagtactcggcggcaatcgcg
ctcctggagccagcaggaagtgaaattgcagatgatctaagtatcttatattcaaataga
gcagcatgttacctaaaagaaggaaactgcagtggctgcattcaagattgtaacagggct
ctggaacttcatccattctctatgaaacctcttctgaggcgggcgatggcctatgaaact
ctagagcagtatgggaaagcttatgtggattataaaacagtgttgcagatagactgtgga
ctccagctagcaaatgacagtgttaacaggctatcaagaattttaatggagctggatgga
ccaaattggcgggagaagctgtcacctattcctgctgtgcctgcttctgtgccactgcaa
gcttggcatccggcaaaagagatgatctcaaaacaagcaggagactccagcagccatcgc
cagcagggcatcacagatgaaaaaacatttaaagcccttaaggaagaaggaaatcaatgt
gtaaatgacaaaaactataaagacgccctcagtaaatacagcgaatgcttaaagattaac
aataaggaatgtgccatatatacaaacaggcaactgtgccagtttgaagaagcaaagcag
gactgtgatcaggcacttcagctagctgatgggaacgtgaaagccttctatagacgagct
ctggctcataaaggactcaagaattatcagaaaagcttaattgatctcaataaagttatc
ctactagatccaagtattattgaggcaaagatggaactggaagaggtaactagactcctt
aatcttaaggataagacagcaccattcaacaaagaaaaggagagaaggaaaattgagatt
caagaggtgaatgaaggcaaggaggagcctggaagacctgcaggggaggtctccatggga
tgccttgcttctgagaagggaggcaaaagcagcaggtcaccagaagaccctgagaaactt
ccgatagccaagcctaataatgcctatgaatttggtcagattataaatgctctcagtacc
aggaaggataaagaagcctgtgcacatcttttagccatcactgcaccaaaagatttgccg
atgtttttaagtaacaaacttgaaggggatacattccttctcctcattcagtctctgaaa
aataatcttattgaaaaagatccctcattggtgtatcagcatcttttatacctgagtaaa
gcagaaaggtttaagatgatgttgacactaattagcaagggccaaaaggagctaattgaa
cagctgtttgaggacctttcggacacaccaaacaaccattttactttagaagatatacag
gccctaaaaaggcaatgtcttacagatactgtaactatacatgccctaaatggaactcgc
tgttccctgaaactcaggcttcacttatcccatagttccacaaaaggactttcctctgag
aataataccttctctttcatgtctgcaatatctcccttttcatcgctgccatcctgtcag
cctataaacctacgcagctattcttcacctaaagaaaagtctcaacctttcatctttccc
tataccattgctttcaaaactggataa

>gi568815590r:100158559_100388174|GENSCAN_predicted_peptide_3|769_aa
MSLHRQMGSDRDLQSSASSVSLPSVKKAPKKRRISIGSLFRRKKDNKRKSRELNGGVDGI
ASIESIHSEMCTDKNSIFSTNTSSDNGLTSISKQIGDFIECPLCLLRHSKDRFPDIMTCH
HRSCVDCLRQYLRIEISESRVNISCPECTERFNPHDIRLILSDDVLMEKYEEFMLRRWLV
ADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQER
AQSLRLRTIRSSSISYSQESGAAAVIYIIIFSVSPSGCTFWGKKPWSRKKKILWQLGTLV
GAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDVSKHKRNLAIAGGVTLSVIVSPV
VAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDINVGGTNTAV
DTTSVAEARHNPSIGEGSVGGLTGSLSASGSHMDRIGAIRDNLSETASTMALAGASITGS
LSGSAMVNCFNRLEVQADVQKERYSLSGESGTVSLGTVSDNASTKAMAGSILNSYIPLDK
EGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGSSSGLPEGKSSATKWSKEATA
GKKSKSGKLRKKGNMKINETREDMDAQLLEQQSTNSSEFEAPSLSDSMPSVADSHSSHFS
EFSCSDLESMKTSCSHGSSDYHTRFATVNILPEVENDRLENSPHQCSISVVTQTASCSEV
SQLNHIAEEHGNNGIKPNVDLYFGDALKETNNNHSHQTMELKVAIQTEI

>gi568815590r:100158559_100388174|GENSCAN_predicted_CDS_3|2310_bp
atgagtttacatcggcaaatgggttcagatcgagatcttcagtcctctgcttcatctgtg
agcttgccttcagtcaaaaaggcacccaaaaaaagaagaatttcaataggctccctgttt
cggaggaaaaaagataacaaacgtaaatcaagggagctaaatggcggggtggatggaatt
gcaagtattgaaagtatacattctgaaatgtgtactgataagaactccattttctctaca
aatacctcttctgacaatggattaacttccatcagcaaacaaattggagacttcatagag
tgccctttgtgccttttgcggcattctaaagacagatttcctgatataatgacttgtcat
cacagatcttgtgtggattgcttacgacaatatttaaggatagaaatctctgaaagcaga
gttaatattagttgcccagaatgtactgaacggtttaatccccatgatattcgcttgata
ttaagtgatgatgtcttgatggaaaaatacgaagaatttatgcttagacggtggcttgtt
gcagatcctgattgtaggtggtgtccagctccagactgtggatatgctgtgatagcattt
ggatgtgccagctgtccaaaattaacttgtgggcgagagggctgtggaacagagttttgc
taccactgtaaacagatttggcaccccaaccagacctgtgatgctgctcgacaagagaga
gcccagagcttacgtttgagaactatacgttcttcatccattagttatagtcaagagtct
ggagcagcagcagttatttacattataattttttccgttagtccatcaggatgtactttt
tgggggaagaaaccctggagccgaaagaagaaaatattgtggcaactgggaacactggtt
ggtgctcctgtcggaatcgctttaatagctggcattgctattcctgcaatgattattggc
attcctgtgtatgtgggccgcaagattcacaatcgctatgaaggcaaggatgtttcaaag
cacaaacggaatttggccatagcaggtggtgtaacgttgtctgtaatcgtgtctccagta
gtagctgcagtgactgtaggtatcggtgttcctattatgttagcttatgtctatggcgta
gttccaatttctctttgtcgaagcggaggttgtggagtctcagcaggcaatggaaaagga
gttaggattgaatttgatgatgaaaatgatataaatgttggtggaactaacacagctgta
gacacaacatcagtagcagaagcaagacacaacccaagcataggggagggaagtgttggt
gggctgactggcagtttgagtgcaagtggaagccacatggatcgaataggagccatccga
gacaacctgagtgaaacggccagcaccatggcactagctggagccagtataacggggagt
ctgtcaggaagtgccatggtaaactgttttaacaggttggaagtacaagcagatgtacag
aaagaacggtacagtctaagtggagaatctggcacagtcagcttgggaacagttagtgat
aatgccagcaccaaagcaatggcaggatccattctgaattcctacatcccattggacaaa
gaaggcaacagtatggaggtgcaagtagatattgagtcaaagccatccaaattcaggcac
aacagtggaagcagtagtgtggatgatggcagtgccacccgaagtcatgctggcggttca
tccagtggcttgcctgaaggtaaatctagtgccaccaagtggtccaaagaagcaacagca
gggaaaaaatcaaaaagtggtaaactgaggaaaaagggtaacatgaagataaatgagacg
agagaggacatggatgcacagttgttagaacaacaaagcacgaactcaagtgaatttgag
gctccatccctcagtgacagtatgccttctgtagcagattctcactctagtcatttttct
gaatttagttgttctgacctagaaagcatgaaaacttcttgtagtcatggttccagtgat
tatcacacccgctttgctactgttaacattcttcctgaggtagaaaatgaccgtctggaa
aattccccacatcagtgtagcatttctgtggttacccaaactgcttcctgttcagaagtt
tcacagttgaatcatattgctgaagaacatggtaacaatggaataaaacctaatgttgat
ttatattttggcgatgcactaaaagaaacaaataacaaccactcacatcagacaatggaa
ttaaaagttgcaattcagactgaaatttag

>gi568815590r:100158559_100388174|GENSCAN_predicted_peptide_4|168_aa
MASRPPGPLRAALDAAVPLRTVHLLDWQAEGEKCRDVAALGEEMSFPRGRQHPWACGLAG
SGVKQQTFAVSVTAHKSSVDPKALGWSVGLAAVEQGVVLLGEAQAAQQLMEWVGGSGMAG
CRSGALPRGKAAKGRLLTYICIDFSQTKNFQPEKPKYESTRLLQENSK

>gi568815590r:100158559_100388174|GENSCAN_predicted_CDS_4|507_bp
atggcgtcacgcccaccgggcccgctgcgggcggctctggacgcggctgttcccttgcgc
acggttcacctgctagattggcaggccgagggagagaagtgccgggatgttgcagctctc
ggcgaggaaatgtcctttcccagaggacggcagcacccttgggcttgtggtctcgctggc
tcaggagtgaagcagcagaccttcgcggtgagtgttacagctcataaaagcagcgtggac
ccaaaggcccttgggtggtctgtgggattggctgccgtggagcagggggtggtgctcctg
ggggaggctcaggccgcacagcaactcatggagtgggtgggaggctcaggcatggcgggc
tgcaggtccggagccctgccccgcgggaaggcagctaagggtcggcttctaacatacatt
tgcattgatttttcacaaacgaagaatttccaacctgagaaacctaaatatgaatctacg
cgtttgcttcaagaaaattcaaaataa

>gi568815590r:100158559_100388174|GENSCAN_predicted_peptide_5|203_aa
MVPWSQEDQEQPQASSSLKQKDNAVSTSQGCLKDQMSSTCKALRAVPVLYKYLLFTVTLF
GRISLSMVILRALGAASQTVDIDEGNENRREKQAGCCQQAALSGLDDVHSHRQLSLVVLL
VVLLNMISIRVMRPMQERLGRGQGSEFTETDERAFKIVEKSKLAHKKWWQNREALCCGYD
EKNMLREFGKGQGESQDGEGGTS

>gi568815590r:100158559_100388174|GENSCAN_predicted_CDS_5|612_bp
atggttccctggagtcaagaggaccaagagcagccccaagcttcctcatccctaaaacag
aaggataatgcagtatctacctcacagggctgtttaaaggatcaaatgagttctacgtgc
aaagcccttagagcagtgcctgtgctttacaagtatttgctctttactgtaacactgttt
ggaaggatatcactgtccatggtgatcttgagggcccttggagcagcttcccaaaccgtg
gatattgatgaagggaatgagaatagaagagagaaacaggctgggtgctgccaacaggca
gccctcagtggattggatgatgtccactcacatcggcaattgtccttggttgtattgctg
gttgtattgctgaacatgatcagcatacgagtgatgaggccaatgcaggagaggcttggc
agaggacaagggagtgaattcactgagactgacgagagagctttcaaaatagttgaaaag
tcaaaattagcacacaagaaatggtggcagaaccgtgaagcattatgttgtggctatgat
gaaaagaacatgctccgagagtttggcaaagggcaaggtgaaagtcaagatggagaaggt
ggaacctcctga

>gi568815590r:100158559_100388174|GENSCAN_predicted_peptide_6|96_aa
MTSLSYITIKDLTRGHSIPAESESRAPCYGASPTKEGKGSLYGAKHLGHVGLLSPARNAM
RADLGPATLAFICAETYTNSDEASQPEVGEPPPGQC

>gi568815590r:100158559_100388174|GENSCAN_predicted_CDS_6|291_bp
atgacatctctgagttatatcactattaaagacctgaccaggggtcatagtatcccagct
gagtctgaaagcagggccccctgttatggggcctctcccactaaagagggaaaagggagc
ctgtacggggcaaaacatttgggccacgtgggcctcctctcccctgcccgcaatgccatg
cgagctgaccttggacctgcgacccttgccttcatctgtgccgagacctacacaaacagt
gatgaagcatcgcagccggaggtgggagagcctccaccaggacagtgctag