GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:03:52

Sequence gi568815575r:23603897_23836017 : 232121 bp : 43.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5514   5661  148  2  1   52   82   108 0.546   6.85
 1.02 Intr +  21912  22013  102  1  0   70   95    37 0.227   2.75
 1.03 Intr +  31505  31597   93  0  0  102   77    23 0.583   2.54
 1.04 Term +  32833  32993  161  2  2   71   54    73 0.447   0.30
 1.05 PlyA +  34592  34597    6                               1.05

 2.02 PlyA -  38444  38439    6                               1.05
 2.01 Sngl -  43610  42609 1002  2  0   86   37   285 0.770  20.15
 2.00 Prom -  45509  45470   40                              -4.96

 3.03 PlyA -  45678  45673    6                               1.05
 3.02 Term -  46819  46532  288  1  0 -104   54   344 0.630   7.18
 3.01 Init -  48345  48085  261  0  0   63   50    98 0.593   0.57
 3.00 Prom -  55819  55780   40                              -4.36

 4.00 Prom +  58291  58330   40                              -5.66
 4.01 Init +  60624  60822  199  2  1  105   82   131 0.978  11.59
 4.02 Intr +  63613  63915  303  2  0   14   39   346 0.910  18.86
 4.03 Intr +  67633  67750  118  2  1   36   78   141 0.883   7.42
 4.04 Intr +  78500  78630  131  2  2  113   77    89 0.943  10.64
 4.05 Intr +  79775  79809   35  0  2  101   98    16 0.856   1.84
 4.06 Term +  82389  82439   51  2  0  102   54    37 0.746  -0.87
 4.07 PlyA +  82477  82482    6                               1.05

 5.11 PlyA -  82760  82755    6                               1.05
 5.10 Term -  87940  87800  141  1  0   76   54    34 0.303  -3.27
 5.09 Intr -  88385  88137  249  2  0   33  119    91 0.042   4.33
 5.08 Intr -  93627  93590   38  1  2   79   79    17 0.031  -2.12
 5.07 Intr - 100948 100798  151  1  1   60  107    79 0.782   6.74
 5.06 Intr - 101184 101097   88  2  1   86   96    26 0.763   3.17
 5.05 Intr - 102843 102732  112  1  1   96   78    77 0.918   6.94
 5.04 Intr - 118857 118774   84  1  0   87  111    59 0.842   7.89
 5.03 Intr - 126668 126631   38  1  2  101   69    23 0.823  -0.39
 5.02 Intr - 127090 126920  171  0  0   99   87    68 0.590   6.86
 5.01 Init - 132016 131958   59  1  2   95   71    42 0.630   3.98
 5.00 Prom - 149330 149291   40                              -5.86

 6.00 Prom + 154204 154243   40                              -5.06
 6.01 Init + 161589 161709  121  2  1   53   55    50 0.786  -1.45
 6.02 Intr + 162039 162168  130  1  1   65   84    67 0.903   3.75
 6.03 Intr + 162584 162746  163  2  1   82  100    83 0.844   8.88
 6.04 Intr + 179417 179521  105  1  0   30   69    93 0.042   2.01
 6.05 Intr + 179762 179813   52  1  1  102   86    14 0.946   1.08
 6.06 Intr + 179904 179987   84  1  0  108   86    60 0.965   7.59
 6.07 Intr + 181432 181533  102  2  0   74   80   115 0.966   9.45
 6.08 Intr + 181624 181664   41  2  2  121   91    15 0.999   3.04
 6.09 Term + 181790 181960  171  1  0   94   55   125 0.988   7.63
 6.10 PlyA + 182000 182005    6                               1.05

 7.00 Prom + 191957 191996   40                              -1.86
 7.01 Init + 211173 211271   99  2  0   85   82    93 0.703   8.66
 7.02 Intr + 231607 231663   57  0  0  128   87   -14 0.002   1.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 179456 179521   66  1  0   81   69    76 0.885   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_1|167_aa
MTEDEGEHDWYKCSSFNNLHSKPWSQRDKDINVSLTYEENLGLELLLPEALFWWWMGSTK
PPSQKTTEKMKNCLIKTFQGGYVELQVLPEEMSRPPATDFSPLPLPFLLGATHGGMGSAV
YPGGCPKDKGSQVTCSSEPETRLPGATAIDSNPAPITSRTAGQLNAP

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_1|504_bp
atgacagaagatgaaggagagcatgactggtacaagtgcagcagcttcaataaccttcac
tcaaaaccttggagtcagagggacaaagacattaatgtctcactcacatatgaagagaat
ctggggctggaactgctcctgccagaagcactattctggtggtggatgggcagcacaaag
cccccatcccaaaagaccacggagaagatgaaaaactgcctcataaaaacttttcaagga
ggatacgtagaattgcaagttttacctgaggaaatgtccaggccccctgctacagacttt
agccccttgcccttgcctttccttctaggggctacacatggtggaatgggcagtgcagtg
tacccaggaggctgccccaaagacaaagggagccaagtcacatgctcctcagagcctgaa
actcgcctgcctggagccacagccattgacagcaaccctgctcccatcaccagcaggact
gcaggacaattaaatgcaccctga

>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_2|333_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRACISKTILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQLNRTEPSEITPHVYNHLIFDKPDKNKQWGKDSLFNK
WSWENWVAIWRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTGKETTIRVNRQPTEWEKMFAIYSSDKGLISRIY
IELKQIYKKKSNNPINKWAKDMNKHFSKEDIYAANRHMKKCSSSLAIREMQIKTTKRYHL
TPVRMAIIQKVRKQQVLERTWRNRNTFTLLVGL

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_2|1002_bp
atggccatactgcccaaggtaatttatagattcaatgctatccccatcaagctgccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgtatttccaagacaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaattgaacagaacagagccctcagaaataacaccacacgtgtacaaccat
ctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaa
tggtcctgggaaaactgggtagccatatggagaaagctgaaactggaccccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagaccaaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacaggaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaatgtttgcaatctactcatctgacaaagggctaatatccagaatctac
atagaactcaaacaaatttacaagaaaaaatcaaacaaccccatcaacaagtgggcaaag
gatatgaacaaacacttctcaaaagaagacatttatgcggccaacagacacatgaaaaaa
tgctcgtcatcactggccatcagagaaatgcaaatcaaaaccacaaagagataccatctc
acaccagttagaatggcgatcattcaaaaagtcaggaaacaacaggtgctggagaggacg
tggagaaataggaacacttttaccctgttggtgggactgtaa

>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_3|182_aa
MQIVQTWRCTLSQGYHCSWAAVDPFSVYGLVNPVHTADVEFFEITVSWTGLIFGFTNHMQ
LHIGATFTANSTPCNELFNSHTIPRQQTENDFDELREEGFRRSNFSELKEKVRTQRKEVK
NLEKRLDEWVTRITSAEKSLNDLIELKTMARELRDECTSFSSQFDQLEERVSVLEDQMNE
MK

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_3|549_bp
atgcagatagttcagacctggcgctgtaccctttctcaaggttaccactgttcatgggct
gcagtagatcccttttctgtgtatggccttgtcaatcctgtgcacacagcagatgtggaa
ttctttgaaataactgttagttggactggtttaatatttggattcaccaaccacatgcag
ttacacattggtgcaacctttacagcaaacagtactccctgcaatgaactatttaattca
catactatccccagacagcagacagagaatgactttgacgagttgagagaagaaggcttc
agacgatcaaacttctccgagctaaaggagaaagttcgaacccaacgcaaagaagttaaa
aaccttgaaaaaagattagacgaatgggtaactagaataaccagtgcagagaagtcctta
aatgacctgattgagctgaaaaccatggcacgagaactacgtgatgaatgcacaagcttc
agtagccaatttgatcaactggaagaaagggtatcagtgctggaagatcaaatgaatgaa
atgaagtga

>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_4|278_aa
MDHRSRLRGTGLNRIPGTQSRAPRVPLPFHVQQEAREGEDWEREPPRQRPPIYEPPESEE
LPDNVMAARRRQKRRSRQGTCFCARVVMEALPLLAATTPDHGRHRRLLLLPLLLFLLPAG
AVQGWETEERPRTREEECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAV
IDGEFKELKLTDYRGKYLVFFFYPLDLGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQ
AFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_4|837_bp
atggatcaccgaagccgactacggggcacaggcctgaaccgaatccctgggactcagtcc
cgagccccccgagtcccactccccttccacgtgcaacaggaggccagggaaggagaagac
tgggagcgagagccacctcgtcagaggcctcctatctatgagccaccagaaagtgaagag
ctgccagataatgttatggctgcccggcggcggcagaagcggcgctcgcgccaagggacg
tgtttctgcgctcgcgtggtcatggaggcgctgccgctgctagccgcgacaactccggac
cacggccgccaccgaaggctgcttctgctgccgctactgctgttcctgctgccggctgga
gctgtgcagggctgggagacagaggagaggccccggactcgcgaagaggagtgccacttc
tacgcgggtggacaagtgtacccgggagaggcatcccgggtatcggtcgccgaccactcc
ctgcacctaagcaaagcgaagatttccaagccagcgccctactgggaaggaacagctgtg
atcgatggagaatttaaggagctgaagttaactgattatcgtgggaaatacttggttttc
ttcttctacccacttgatttaggtctcttcattattgatgacaaaggaatcctaagacaa
attactctgaatgatcttcctgtgggtagatcagtggatgagacactacgtttggttcaa
gcattccagtacactgacaaacacggagaagtctgccctgctggctggaaacctggtagt
gaaacaataatcccagatccagctggaaagctgaagtatttcgataaactgaattga

>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_5|376_aa
MVSLFDAYVVKNLVLLLFERDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLG
SEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIVNK
GRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPNGSRPFVVAVDDIMFQKPVEVGSLLF
LSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGAIFLEG
SVVSLKVSCLSNEVSIKGPRGPGTQNFWTAELVKACRKVNKNSPMCWDDGAPQLHGNRSS
RAQDPSRPRPMCLFIWVFIRILQNILHKKLVDSIRIELDQKIPGWCPLQNCLPVGGENPY
TLHIWSQKSSVLIVVM

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_5|1131_bp
atggtgtctctgtttgatgcctatgtggtgaaaaaccttgttttacttttatttgaaaga
gaccatgtgaaggcaatggaagaaaggaaattacttcatagtttcttggctaaatcacag
gatggactgcctcctaggagaatgaaggacagttatattgaagttctcttgcctttgggc
agtgagcctgaattacgagagaaatatttgactgttcaaaacaccgtaagatttggcagg
attcttgaggatcttgacagcttgggagttcttatttgttacatgcacaacaaaatccac
tccgccaagatgtctcctttatcgatagttacagccctggtggataagattgtgaacaag
gggagaagaattgccttcagctccacgtcgttactgaaaatggcccccagcgctgaggag
aggaccaccatacatgagatgtttctcagcacactggatccaaatggttctcgaccgttt
gtggtagcagtagatgacatcatgtttcagaaacctgttgaggttggctcattgctcttt
ctttcttcacaggtatgctttactcagaataattatattcaagtcagagtacacagtgaa
gtggcctccctgcaggagaagcagcatacaaccaccaatgtctttcatttcacgttcatg
tcggaaaaagaagtgccattggttttcccaaaaacatatggagccattttcttggaggga
tcagtggtgtcactgaaggtgtcatgcctatccaatgaagtctccataaaaggcccaaga
ggaccaggtacgcagaacttctggacagctgagctggtgaaggcttgcaggaaggtgaac
aagaattcacccatgtgttgggatgatggtgcaccccaactccacgggaatagaagctcc
cgtgctcaggacccttccagacctcgccctatgtgcctcttcatctgggtgtttattcgt
atccttcaaaatatccttcataagaaactggtggacagcatcagaattgaattggatcag
aagattcctggctggtgtccactgcagaattgcttgcctgttggtggggaaaatccctac
accctacacatttggtcacagaagtcttctgtattgattgttgtcatgtga

>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_6|322_aa
MATPQVEQPVDHFQSIGTALTSERNDGIAVPQLYQLDSPTTRKLCDQWCLCLSFDQARQT
CSTDVAWQAVLSSCYQPGFHACRGPAIQWVLSSRPTSRKNEVRGQLEGEQGGEEPYRVTE
QLSGNLKWVAPFRRQVVPGPGPQREEKQKTKMAKFVIRPATAADCSDILRLIKELAKYEY
MEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLL
YLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLS
SEEGWRLFKIDKEYLLKMATEE

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_6|969_bp
atggctactccacaggtagagcagccagtagaccattttcaaagcattgggacagctctc
acctcagaaagaaatgatggtattgcggtgcctcagctctaccaactagattcaccaacc
actagaaagctctgtgaccagtggtgcctttgcctgagttttgatcaggcccgccagact
tgttccactgacgtggcctggcaggctgtgctcagctcatgctaccagccaggattccac
gcctgccgaggtcccgccattcagtgggtcctgagttctcgtcccacatccaggaagaat
gaggtacgcggacaactagagggtgagcaaggcggagaggagccttatcgagtgacagaa
cagctctcgggaaacttgaagtgggtagctcctttccgcaggcaggttgtcccagggcct
ggtccgcaaagggaagaaaagcaaaagacgaaaatggctaaattcgtgatccgcccagcc
actgccgccgactgcagtgacatactgcggctgatcaaggagctggctaaatatgaatac
atggaagaacaagtaatcttaactgaaaaagatctgctagaagatggttttggagagcac
cccttttaccactgcctggttgcagaagtgccgaaagagcactggactccggaaggacac
agcattgttggttttgccatgtactattttacctatgacccgtggattggcaagttattg
tatcttgaggacttcttcgtgatgagtgattatagaggctttggcataggatcagaaatt
ctgaagaatctaagccaggttgcaatgaggtgtcgctgcagcagcatgcacttcttggta
gcagaatggaatgaaccatccatcaacttctataaaagaagaggtgcttctgatctgtcc
agtgaagagggttggagactgttcaagatcgacaaggagtacttgctaaaaatggcaaca
gaggagtga

>gi568815575r:23603897_23836017|GENSCAN_predicted_peptide_7|52_aa
MTRDNRVEGYDLTSEVMQYHFGCIQVIVGEVTKEFDRFIALLKTKNWKQPML

>gi568815575r:23603897_23836017|GENSCAN_predicted_CDS_7|156_bp
atgacgagagacaaccgggtggaaggttatgacctaacctcagaagtcatgcagtatcac
tttggctgcatccaggtcattgtgggggaggtcactaaggaatttgatagatttattgca
ttgttaaaaactaaaaactggaaacaacctatgttg