GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:14:15

Sequence gi568815596f:227713912_227916384 : 202473 bp : 42.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9742   9790   49  0  1   62   53    72 0.893   2.26
 1.02 Intr +  10668  10897  230  1  2    9   78   188 0.374   6.57
 1.03 Intr +  14537  14746  210  1  0   54   97   202 0.784  15.89
 1.04 Intr +  16779  16844   66  2  0   40   86    92 0.322   2.38
 1.05 Term +  19016  20098 1083  1  0  -49   38   341 0.163   6.51
 1.06 PlyA +  20754  20759    6                               1.05

 2.04 PlyA -  21448  21443    6                               1.05
 2.03 Term -  30459  30304  156  0  0   79   43   178 0.548   9.35
 2.02 Intr -  32305  32121  185  2  2   22   26   253 0.208  11.09
 2.01 Init -  44241  43941  301  0  1   55   33   175 0.462   6.22
 2.00 Prom -  51839  51800   40                              -5.55

 3.00 Prom +  53619  53658   40                              -8.15
 3.01 Sngl +  53712  54332  621  2  0   70   53   548 0.993  45.44
 3.02 PlyA +  54979  54984    6                               1.05

 4.00 Prom +  67663  67702   40                              -2.95
 4.01 Init +  79069  79244  176  0  2   86   89    42 0.430   2.97
 4.02 Intr +  89244  89352  109  0  1   95   85    57 0.088   5.47
 4.03 Term +  91785  91916  132  2  0   -3   43   159 0.053  -0.59
 4.04 PlyA +  93334  93339    6                               1.05

 5.00 Prom +  94202  94241   40                              -7.15
 5.01 Init + 100001 100076   76  1  1   61  115   117 0.998  11.01
 5.02 Intr + 101543 101657  115  0  1   82  103   135 0.556  12.99
 5.03 Intr + 105342 105421   80  0  2   69  110     2 0.094  -1.22
 5.04 Intr + 111350 111480  131  0  2   22   65    81 0.040  -1.31
 5.05 Term + 118116 118256  141  2  0   59   38   157 0.306   4.75
 5.06 PlyA + 118430 118435    6                               1.05

 6.03 PlyA - 119699 119694    6                               1.05
 6.02 Term - 122890 122737  154  0  1   32   48    82 0.439  -4.99
 6.01 Init - 124899 124676  224  0  2   78  116   179 0.870  17.78
 6.00 Prom - 130184 130145   40                              -6.05

 7.00 Prom + 131526 131565   40                              -6.45
 7.01 Init + 135450 135529   80  2  2   61   99    66 0.465   5.58
 7.02 Term + 139919 140219  301  2  1   29   54   172 0.346   1.61
 7.03 PlyA + 140882 140887    6                               1.05

 8.04 PlyA - 140969 140964    6                               1.05
 8.03 Term - 146450 146174  277  1  1   71   33   131 0.557  -0.15
 8.02 Intr - 146648 146561   88  0  1   77   64   130 0.860   7.61
 8.01 Init - 151750 151681   70  1  1   83   78    19 0.438   1.66
 8.00 Prom - 154956 154917   40                              -5.15

 9.03 PlyA - 155434 155429    6                               1.05
 9.02 Term - 156610 156203  408  1  0   52   37   286 0.952  14.13
 9.01 Init - 158700 158566  135  0  0   69   50   159 0.398  10.39
 9.00 Prom - 168892 168853   40                              -5.45

10.00 Prom + 169678 169717   40                              -4.95
10.01 Init + 171445 171512   68  0  2   42  111    77 0.499   6.00
10.02 Intr + 179884 180006  123  1  0   50   65   157 0.539   8.38
10.03 Intr + 184271 184370  100  2  1   64   73    50 0.636   0.29
10.04 Intr + 191018 191124  107  1  2   88   86   100 0.836   7.89
10.05 Intr + 192325 192427  103  1  1   69  105   -34 0.842  -4.34
10.06 Intr + 193227 193341  115  2  1   59   78   137 0.879   8.90
10.07 Term + 194978 195030   53  0  2   26   48   112 0.772  -2.39
10.08 PlyA + 202120 202125    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_1|545_aa
MCRRAQEFLSVTLMTKAASTAAAAAGAAAGAAAHPVAPAGGAAATATTAATTTATTAATT
AATAATTAATTPTATHGVSREDSGEVTRKDSAEVLPGGLLLQLLPLLPRLLWGLLQHTCD
LLLPPHLRLMWLRLWEGLLPAERLLPEAMLLLGGPPASGKMLQQGMEKGTEDFSVVLAAT
LGLRKNKIPRNPTYKGCEGPLQGELQTTAQQNKRGHKQIEEHSMLMGRKNQYCEMAILPK
VIYRFNAIPIKLPMSFFTELEKTTLKFIWNQKRARIAKTILSQKNKAGSITLPDFKLHYK
ATVTKTAWYWYQNRDIDQWNRTEPSEIIPHIYNHLIFDKPDENKKWGKDSLFNKWCLENW
LAIYRKLKLDPFLTPSTKINSRWIKDLNVRPKTIKTLEENLSITIQDIGIGKDFMSKASK
AMATKAKIEKWDLIKLKSFCTAKETTIRVNRQPTEWEKMFAIYPSDKRLIPRIYKELKQI
YKKKSNKPIKKWGKDMNRHFSKDNIYAANRHMKKSSSSLAIREMQIKTTMRYLTPVRMAI
IKKSG

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_1|1638_bp
atgtgtagacgagcacaggaatttctgtcagtgacactgatgaccaaagcagcctccaca
gcagccgcggcagcaggggcagcagctggagcagcagcccacccggtagcacctgcaggt
ggtgcagctgccacagccaccaccgcagccaccaccacagccaccactgcagccaccacc
gcagccaccgcagccaccaccgcagccaccacacccacagcaacccatggtgtcagtaga
gaggactcaggtgaagtgacgaggaaggactcagcagaggtgctaccgggtgggctgctg
ctccagctgctgcccctgctgccgcggctgctgtgggggctgctgcagcacacctgtgat
ctgctgctgccgccgcacctgcggctcatgtggctgcggctgtgggaagggctgttgcca
gcagaaaggctgctgccagaagcaatgctgctgctaggcgggcccccggcctctgggaag
atgctgcagcaagggatggagaaagggacagaagacttctccgtggtgttggcagccacc
ctgggcctgagaaagaataaaatacctaggaatccaacttacaagggatgtgaaggacct
cttcaaggagaattacaaaccactgctcaacaaaataaaagaggacacaaacaaatagaa
gaacattccatgctcatgggtaggaagaatcaatattgtgaaatggccatactgcccaag
gtaatttatagattcaatgccatccccatcaagctaccaatgagtttcttcacagaactg
gaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcattgccaagacaatc
ctaagtcaaaagaacaaagctggaagcatcacgctacctgacttcaaactacactacaag
gctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaac
agaacagagccctcagaaataataccacacatctacaaccatctgatctttgacaaacct
gatgaaaacaagaaatggggaaaggattccctatttaataaatggtgcttggaaaactgg
ctggccatatatagaaagctgaaactggatcccttccttacaccttctacaaaaattaat
tcaagatggattaaagacttaaatgtcagacctaaaaccataaaaaccctagaagaaaac
ctaagcattaccattcaggacataggcataggcaaggacttcatgtctaaagcatcaaaa
gcaatggcaacaaaagccaaaattgagaaatgggatctaattaaactaaagagcttctgc
acagcaaaagaaactaccatcagagtgaacaggcagcctacagaatgggagaaaatgttt
gcaatctacccatctgacaaaaggctaatacccagaatctacaaagaactcaaacaaatt
tacaagaaaaaatcaaacaaacccatcaaaaagtggggaaaggatatgaacagacacttc
tcaaaagacaacatttatgcagccaacagacacatgaaaaaaagctcatcatcactggcc
atcagagaaatgcaaatcaaaaccacaatgagatatctcacaccagttagaatggcaatc
attaaaaagtcaggataa

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_2|213_aa
MHRVRPLGLGQAPLKALCKGHTQFSLQNNVVGRYYCPHFTDEQSNTEVRYLCLIHMNKQL
PEKGAVMRNLHEEMSLGSLTLKEVPHAPSRLAREIPSVNKTAALLLAAALLLTASLLLAT
ALPIATATRAAGAAAAADHGSAAAASTAATAAGAAAGAAAHPTTHRRGPCGGDPAVPLGT
YAAGSDQQPPGSAGGCMSPRMSVSVVLQLAPLS

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_2|642_bp
atgcacagagtacgtcccctgggcctgggccaggcacctctcaaagctctctgcaaggga
catacacaattttctctccagaacaacgttgttggaagatattactgtccccattttaca
gatgagcaaagtaacacagaggttcgttatctctgcttaatacatatgaacaagcaattg
ccagaaaaaggagcagtgatgaggaatttacatgaggaaatgagcctgggatccctgaca
ctcaaggaagtgcctcatgctccttccagattggcaagagaaatacccagtgttaacaag
acagcagcattgcttctggcagcagcacttctgctgacagcatcccttctgctggcaaca
gcccttcccatagccacagccacacgagctgcaggtgcggcggcagcagcagatcacggg
agtgctgcagcagcctccacagcagccacggcagcaggggcagcagctggagcagcagcc
cacccgacaacgcacagaagaggcccatgcggtggagaccccgcagtccctcttggaact
tacgctgcaggttctgatcaacaaccaccaggctctgcagggggctgcatgtcccccagg
atgtcggtgtccgtggttttacaactggcacctctttcataa

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_3|206_aa
MDVGDKAQGDQCRAARKEPASSQVTRTPAVTEWGEHRFKKYLEGKAVSTWRMNVMRNGQS
GRSRLQTPGKRSFQSLFGCSEPYSGILNQGPFRPPGDNQLCLGQFCWSQQAAGVAVLEDA
AKPPWCTGQAPWDGNPGLGARLPGSPLAAPAPGGRKRGGPGSRSVLLQKQALALRADVRG
SPADPLPSMESRSSQGSPPPFTPPGS

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_3|621_bp
atggatgtgggggacaaggcccagggagaccaatgcagagccgccaggaaagagcctgca
agttcccaagtcaccaggaccccagcggtgacggagtggggagagcacaggttcaagaaa
tatttagaaggcaaagctgtcagcacttggcgaatgaacgtgatgcgaaatggacagagt
gggagaagcaggctacagacaccaggaaaaagatcgttccaatcactctttggctgttcc
gagccttatagcgggatcctcaaccaggggccattccgccccccaggagacaaccagctg
tgtctcggacagttttgctggtcacagcaagcggccggggtggcggtgctagaggacgct
gctaaacccccttggtgcacagggcaggccccatgggacgggaatcctgggctcggggcg
cggctgcctgggtcccctctggcggcgccagctccaggaggcaggaaacgaggaggccct
ggctcacggagtgtgcttttacagaagcaagccctggcgctccgggcagatgtccggggg
tctcccgcagaccccttgccctccatggaatcccgttcctcccagggttcccctccccca
tttacccctccaggctcctga

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_4|138_aa
MEGVSYWLAFKKFQTFSGDIILIFVPVEITFYSYSSTITHSSSLTCGQLGKIRTTEANQE
TKYECNELSVGEKRSELSLIINSGGCPNVYSKIGLQDEPQTKLLRHRIKEGSGLFGPERQ
QTRVFKSRAPRKRNSWPF

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_4|417_bp
atggaaggtgtatcctattggttggctttcaaaaaatttcagactttttctggagatatt
atactgatttttgtgccagttgaaatcacattttattcttattcatctaccatcactcac
tcaagctcccttacatgtggccagcttggaaagatccgcacgacagaggcaaatcaggaa
acgaaatatgaatgtaatgaactctcagtaggtgaaaaaaggagtgaactttctttgatc
atcaactcaggtgggtgtccaaatgtttattcaaaaattggtttgcaggatgagccacag
acgaaactcctcagacaccggattaaagaaggaagtggtttattcggcccggagcgtcag
cagactcgcgtctttaagagccgagctccccgaaaaagaaattcttggcctttttaa

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_5|180_aa
MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI
NAIIHCWNSTVKARHFQGAADLSHCWKASAGDEESIECRFIHTQAIMGLVLHRLKSSEER
ACLVLRVEIYKQIHTTKKLETGPPIATIQGLESLIKKPRQLATLEVGEGYGMLAETLHDL

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_5|543_bp
atgtgctgtaccaagagtttgctcctggctgctttgatgtcagtgctgctactccacctc
tgcggcgaatcagaagcagcaagcaactttgactgctgtcttggatacacagaccgtatt
cttcatcctaaatttattgtgggcttcacacggcagctggccaatgaaggctgtgacatc
aatgctatcattcactgttggaacagcacagtcaaagcaaggcattttcagggggcagca
gatttgtctcattgctggaaggcctcagcaggtgatgaggaaagtattgaatgtagattc
attcatactcaggccataatgggcttagtgcttcataggcttaaatccagcgaagaaaga
gcctgcttagtactgagagttgaaatttacaagcagatccatactactaagaaactagag
actggacccccaatagctacaatccagggattagaaagcctcatcaagaagccccgacag
cttgctacccttgaagttggtgaaggatatggaatgcttgcagaaacacttcatgatcta
tga

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_6|125_aa
MRKNQRKKAENSKNQNASSSPKDHNSSPAREQNWTENETDELTEVGFRRWVITNSSELKE
HVLSQCKEVKNLEKRIKHERSKINTLTSQLKELEKQEQTNSKASRRQEITKIRAGLKEIE
TQKTL

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_6|378_bp
atgaggaaaaaccagcgcaaaaaggctgaaaattccaaaaaccagaacgcctcttcttct
ccaaaggatcacaactcctcaccagcaagggaacaaaactggacagagaatgagactgac
gaattgacagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggag
catgttctgtcccaatgcaaggaagttaagaaccttgaaaaaaggataaagcatgaaaga
tctaaaatcaacaccttaacatcacaattaaaagaactagagaagcaagagcaaacaaat
tcaaaagctagcagaagacaagaaataactaagatcagagcaggactgaaggagatagaa
acacagaaaaccctttga

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_7|126_aa
MPHYTLLPFGIQEKPTSINIDTDLEVCTYPLNQNAGQEEEELVWERVWRGLLRRKVNGEA
PSMLASKGESALLSAEAGGKALGNIPGWEGELVHEVCLIKDKLPCPISKIPQSFVPKGED
EDCFSV

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_7|381_bp
atgccacattacaccctccttccttttggaattcaggaaaagccaaccagcattaatatc
gacacagaccttgaagtctgcacttatccccttaaccagaacgctgggcaggaggaagaa
gagcttgtctgggaaagggtttggaggggattgttgagaaggaaagttaatggagaagct
cccagcatgttggcaagtaagggtgagtcagctttgctaagtgcagaagctggtggaaag
gcacttgggaacatccctgggtgggaaggagagttggtgcatgaagtttgtttgatcaaa
gacaaacttccttgtcctatttcaaaaattccccagagctttgtacccaaaggagaggac
gaagactgtttttcggtgtga

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_8|144_aa
MGDKSETPSKKTKQKRRKEEMIVVGLVPAGDRRQLQGPGSTCGLIPIKQATPSSSNRALH
SWALASWMVTRQVQAIQNASEIVAHSHQLCAGVPVPYSLIIAESATGLVNSSAVLLWQTH
LKILLRICSRPLMIWKTYFPFRSL

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_8|435_bp
atgggtgacaagagcgaaactccatctaaaaaaacaaaacaaaaaagaagaaaggaagaa
atgattgtagtgggcctagtgcctgctggagaccgcagacagcttcagggcccaggttcc
acgtgtggcctgattcccatcaagcaggcaacacccagcagctctaacagagctctccac
agctgggctctagcatcatggatggtgacaagacaagtgcaggccattcagaatgccagc
gagattgtggcccacagccatcagctgtgtgctggtgtcccagttccctattccctgatc
atagcagagtcagccacaggcctagtgaacagttctgcagtgttgctttggcagacccac
ctgaaaattctgctcagaatctgttctcgcccactaatgatttggaaaacgtacttcccg
tttcgatcactttag

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_9|180_aa
MPSTGRAQFEEAAGLGWDWKKEIMRSLCDTSSAMLTKQLDVLQGKGDLAFRDDSIQPQEE
PAIRPRSSQLVPPMGIQDSKEPNRTCCLNGGTCMLGSFCACLPSFYGWNCEHGVRKENCG
SVPHDTRLPKKCSMCKCWHGQLRCFPQAFLPGCDGLVMDEHLMAPRTPELPPSACTTFIC

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_9|543_bp
atgccttctactggcagggcacagtttgaggaagcagcaggattgggatgggactggaaa
aaagaaatcatgagatctctatgcgatacctcatcggcgatgttgaccaagcagttggat
gtgttgcagggaaaaggagacctggccttcagagatgacagcattcagccccaggaggag
cctgcaattcgtcctcggtcttcccagcttgtgccccccatggggatacaggacagtaag
gagccaaacagaacctgctgcctgaatgggggaacctgcatgctggggtccttttgtgcc
tgcctcccctccttctatggatggaactgtgagcacggtgtacgcaaagagaattgtggg
tctgtgccccatgacacccggctgcccaagaagtgttccatgtgtaaatgctggcacggg
cagctccgctgctttcctcaggcatttctacctggctgtgatggccttgtgatggatgag
cacctcatggctcccaggactccagaactaccaccgtctgcatgcaccacttttatatgc
tag

>gi568815596f:227713912_227916384|GENSCAN_predicted_peptide_10|222_aa
MLEYEKHGELKTKSIDLLDLGPSFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN
NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIGHSAEIISLSFNTSGDRIITGSF
DHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATL
TGHDDEILDSCFDYTGKLIATASADDTDDAKLHRYHLPDDHV

>gi568815596f:227713912_227916384|GENSCAN_predicted_CDS_10|669_bp
atgttggaatatgaaaaacatggagaattaaagactaagtccatagatttgcttgatctt
ggtcccagctttatcacaggaagctatgatcggacgtgcaagctctgggacactgcgtct
ggagaggagctgaacacgctggagggccacaggaatgtggtttatgccatagcattcaac
aatccttacggtgacaaaatcgccactgggtcctttgataaaacttgtaaactctggagt
gtggaaacaggaaaatgttaccataccttcaggggtcatacagcagaaataggacattct
gccgaaatcatctccttgtcatttaacacctcaggagacagaatcatcacggggtctttt
gatcataccgttgtagtgtgggacgctgatactggaaggaaggtaaatatcttaattggt
cattgtgctgagattagcagtgcctcattcaattgggattgctctctaatattaactggc
tctatggacaaaacctgcaagctgtgggatgctacaaatggaaaatgtgtggcaacctta
acaggccatgatgatgaaatactagacagctgctttgattacactggaaagcttattgca
actgcttcagctgatgatacagatgatgctaaactacatcgataccatctacctgatgac
cacgtgtga