GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:08:56

Sequence gi568815591f:26260973_26472569 : 211597 bp : 42.32% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15397  15444   48  0  0   88   83    53 0.039   5.80
 1.02 Term +  30302  30370   69  1  0   31   48   164 0.588   3.66
 1.03 PlyA +  32593  32598    6                               1.05

 2.00 Prom +  38789  38828   40                              -3.55
 2.01 Init +  45765  46136  372  2  0   81   81    71 0.222   2.73
 2.02 Intr +  47512  47774  263  0  2   43   81    96 0.466  -0.24
 2.03 Intr +  48507  48641  135  0  0   74   50   118 0.368   5.36
 2.04 Intr +  69238  69346  109  1  1   39   73    90 0.002   1.97
 2.05 Term +  76656  76823  168  2  0   78   54    57 0.025  -1.80
 2.06 PlyA +  80333  80338    6                               1.05

 3.05 PlyA -  81555  81550    6                               1.05
 3.04 Term -  84640  84266  375  1  0   48   40   314 0.651  16.35
 3.03 Intr -  85284  84987  298  2  1  114   27   267 0.861  19.15
 3.02 Intr -  85355  85327   29  2  2   65   58     1 0.485  -9.20
 3.01 Init -  85671  85630   42  0  0   84   92    53 0.374   5.79
 3.00 Prom -  87498  87459   40                              -4.15

 4.00 Prom +  87995  88034   40                              -6.45
 4.01 Init +  99991 100089   99  0  0   34  103    60 0.213   2.41
 4.02 Intr + 103563 103663  101  2  2  101   78     4 0.659  -1.31
 4.03 Intr + 104075 104173   99  2  0   95   87   101 0.893   9.01
 4.04 Intr + 110849 111061  213  2  0   73   63   180 0.899  10.91
 4.05 Term + 111519 111600   82  0  1  121   48    40 0.951  -0.51
 4.06 PlyA + 111884 111889    6                              -0.45

 5.08 PlyA - 111905 111900    6                               1.05
 5.07 Term - 112324 112295   30  1  0   69   39    33 0.017  -6.62
 5.06 Intr - 115366 115115  252  1  0   70   94   246 0.723  20.11
 5.05 Intr - 116404 116162  243  1  0   20   46   193 0.636   5.07
 5.04 Intr - 121306 121201  106  0  1   41   51    27 0.054  -6.40
 5.03 Intr - 122603 122403  201  1  0   70   62   152 0.089   8.28
 5.02 Intr - 138334 138204  131  1  2   96   47    90 0.307   4.27
 5.01 Init - 139483 139169  315  1  0  109   76   109 0.822   9.20
 5.00 Prom - 143319 143280   40                             -10.25

 6.04 PlyA - 143515 143510    6                               1.05
 6.03 Term - 143762 143522  241  1  1   78   37   163 0.112   4.71
 6.02 Intr - 152848 152705  144  0  0   46   97   101 0.614   5.28
 6.01 Init - 153195 153122   74  0  2   72   49    51 0.438   0.19
 6.00 Prom - 163676 163637   40                              -3.45

 7.03 PlyA - 164225 164220    6                               1.05
 7.02 Term - 165011 164766  246  2  0   76   43   159 0.741   5.01
 7.01 Init - 168910 168809  102  1  0   75   58    83 0.551   4.29
 7.00 Prom - 173592 173553   40                              -6.05

 8.00 Prom + 174713 174752   40                              -5.05
 8.01 Init + 174843 174960  118  2  1   57   46    86 0.694   1.71
 8.02 Intr + 180625 180861  237  2  0  125   85   141 0.661  14.16
 8.03 Intr + 186910 187046  137  2  2   14   92   119 0.390   4.27
 8.04 Term + 200467 200634  168  0  0   -2   47   227 0.247   6.50
 8.05 PlyA + 201486 201491    6                               1.05

 9.00 Prom + 204645 204684   40                              -7.95
 9.01 Init + 206040 206374  335  2  2   88   96    61 0.660   3.71
 9.02 Intr + 207035 207110   76  2  1   79  100    56 0.960   4.50
 9.03 Intr + 207293 207421  129  1  0  108   45    83 0.805   5.97
 9.04 Intr + 207753 207873  121  2  1   45   68    99 0.366   2.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 145029 145466  438  2  0   62   43   197 0.849   8.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_1|38_aa
MGMATVKKDKPELRKKVGLEWSLEDDQRQAVSNGKIHA

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_1|117_bp
atggggatggccacagtcaagaaagacaaaccagagctcagaaaaaaggtgggcctggaa
tggtccctggaggatgatcagcgacaagctgtatctaatgggaaaattcatgcttga

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_2|348_aa
MRKAPQHFSYWGSWESLRMNSDCSWHSRSQAQASMLAHLIFTVDHEAGSYLLLQMRTLKH
RDEVIWERAECEFTTRWSGVKCLTLLLPLTVLILLTLGGHSPLNCSSAVDLHDRGTVKER
GLFPSSLFNEVCVKGPRGQGLEGFWKAEHVEVPGGWCTWGGMGAPYPYLVLCVSICVLCT
ILYNKPVISFVSRSSKLIKPKEEVMGSPVYSQWPFIASDPNQVCRVNALHFSQYYLFSED
KYYVFSGIRLLASPGFMRSEKVGKSVWRGRQSHRHEEQEAGEKQVLLGNEGEEHVAEFPS
LLRLNGTHCMERPHFAHPLHFIDGHLGYFHLLAIVNNTAVDVDPQIAL

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_2|1047_bp
atgaggaaggcacctcagcatttttcatattgggggtcctgggaaagtctgagaatgaac
agtgactgcagctggcacagtcggagccaggcacaggcctccatgcttgctcatttgatc
tttacagtagatcatgaagcaggcagttatctcctcttacagatgagaacactgaagcac
agagatgaagtaatttgggaaagggcagaatgtgaattcacaaccaggtggtctggagtc
aaatgcctcacactacttttaccactcactgtgctcatcctgctcactttaggggggcat
tcccctctaaactgctcctcagcagtggatcttcatgacagaggcaccgtgaaggaaaga
gggttatttccatcatccctgttcaatgaagtctgtgtaaaaggcccaagaggacagggt
ttggagggcttctggaaggctgaacacgtggaggttcctggggggtggtgcacctgggga
ggtatgggagctccatacccataccttgtcctgtgcgtctccatctgtgtcctttgtact
atcctttataataaaccagtaataagttttgtgagccgctctagcaaattaatcaaaccc
aaggaggaggtcatgggatccccagtttatagccagtggcccttcatagctagtgaccct
aaccaggtctgccgagtgaatgcactgcacttttctcagtattacctcttttcggaagat
aagtattacgtcttttcaggtatccggctgttggcttctcccgggttcatgaggtcagaa
aaagtggggaagtcagtgtggaggggtcggcaaagccacaggcatgaggagcaggaagct
ggagagaagcaggtcttgctaggaaatgagggggaggagcatgtggcagaatttccttcc
cttttaaggttgaatggtacccattgtatggagagaccacattttgctcatccattacat
ttcattgatggacacttaggttacttccacctcttggctattgtgaataatactgctgtg
gatgtggacccacaaatagctctttga

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_3|247_aa
MKAMQAPMVGVEEQSPPRPTVPDMTKVNISPHQGLGVWTPKSPRQLDDDRPSNRKASQSG
WGWSLSELARKLEMPGSRSHVRGDAGWKRRAERSTTRGSPDAFTGNSNLLGSGPSCDTYI
TPESLYTHVTGTIGNTGKQEHRLRFQGRVEVQTRDPTGPLEGASELHPSSSRKLSKRKGV
PLPWSSQRTHGEGMGEQGIAVFKEKKQDLQGSGGATTTPTEPGEKRALWSRDRDQARSAG
GQGSQRV

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_3|744_bp
atgaaggctatgcaggcaccaatggtgggagtagaggagcagagccccccccgccccaca
gtccctgacatgaccaaggtgaacatcagtccacaccaggggttaggagtctggacccca
aagagtccaaggcagctggatgatgacagaccttcaaaccgcaaggccagccagtcaggc
tggggctggagccttagtgaattggcgaggaagctggagatgccggggagcagaagccat
gtgcggggggatgctggctggaaaagacgcgcagagagatccaccaccagaggcagccct
gacgcttttaccggaaactcaaaccttctgggatcaggcccttcctgtgacacttatatt
actccagagagtctctatactcatgtcactggcaccatagggaacacagggaagcaggaa
cacaggctccgcttccagggccgtgtggaggtgcagacgagagaccccacagggcctctg
gaaggggcaagcgagctgcacccgagcagcagcaggaagctttccaagaggaagggagtc
cctctcccctggagcagtcagaggacccatggagagggaatgggagagcaggggatcgca
gtgttcaaggaaaaaaagcaggacctccaggggagcggaggagcaacaacaacacccaca
gagcctggtgaaaagcgtgccctatggtccagagatcgtgaccaggccagatcagctggg
ggacagggttctcagagggtgtag

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_4|197_aa
MPLQEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRL
QSNALLVQLPELPSKNLFFNMNNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSH
LNSEDIEACVSGQTKYSVEEAIHKFALMNRRFPEEDEEGKKENDIDYDSESSSSGLGHSS
DDSSSHGCKVNTAPQES

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_4|594_bp
atgccattacaggaatttgtaagtgtctgggttcgagatcctaggattcagaaggaggac
ttctggcattcttacattgactatgagatatgtattcatactaatagcatgtgttttaca
atgaaaacatcctgtgtacgaagaagatatagagaattcgtgtggctgaggcagagactc
caaagtaatgcgttgctggtacaactgccagaacttccatctaaaaacctgtttttcaac
atgaacaatcgccagcacgtggatcagcgtcgccagggtctggaagatttcctcagaaaa
gtcctacagaatgcacttttgctttcagatagcagccttcacctcttcttacagagccat
ctgaattcagaagacattgaggcgtgtgtttctgggcagactaagtactctgtggaagaa
gcaattcacaagtttgccttaatgaatagacgtttccctgaagaagatgaagaaggaaaa
aaagaaaatgatatagattatgattcagaaagttcatcctctgggcttggacacagtagt
gatgacagcagttcacatggatgtaaagtaaatacagctccgcaggaatcctga

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_5|425_aa
MVGLNWGSSGSAIRTMSTPISVKLYKTLPLSPDHCHDRPKQLQSIVSMCIWGVFNTRIIG
ELHHKSPVGAVAVCGINAHSGTSPRPDHLQRIVSMHTPGAPTPKPGCNCRTAFSRQPDRI
AVCWVSAIIKNDHKYAFGKRNENSSRPKRKRADWSNQGKHVLRMAEPLLQSRSLGGPLEQ
GLLTCFGELPEREIDFSLIGAIAIWGVFVTATVLSRLVPKLWLQKLEFEWGGAERARDCR
VRFTLRATGRTGFCEYTSDQMMLLSTTDTYVGNRFFLLGSPNTTPLRGQLARPNQGRVLQ
WAAAASALARQRPLLSSGGLAPDVSQAARFFRLPWVTRAVAMGYRTEAGWLATCSPVAAA
SGAARAGRGGSARVRDAARGMRAGRGGAATNRRPRVQPRERHRQWGGGQSYKEGPEKPFV
EADFG

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_5|1278_bp
atggtgggacttaactggggcagttccggttctgccattaggaccatgagcactccaatc
tcagtgaaattgtataagacactgccattatccccggatcattgccacgatagacccaaa
caactccagtctatcgtgtcaatgtgtatttggggagtctttaacacacggatcattggc
gagctgcaccataaaagccctgtaggagccgtggccgtgtgtggaatcaatgcacactcg
gggacttccccacgcccggatcatttgcagcgcatcgtgtcaatgcatactccgggagcc
cctactccgaagcctggctgcaactgccgaacagccttttctcggcagcctgacagaata
gctgtgtgttgggtttctgcaatcataaaaaatgaccacaaatatgcattcggaaagagg
aacgaaaactcctctaggcccaaacgaaagagggctgactggagcaatcagggaaagcac
gtgttgaggatggcagagccactcctccagtccaggtccctgggcggccccctggagcag
ggcttgcttacctgctttggagagttacctgaaagagaaattgatttctccctcattgga
gccattgccatctggggtgtctttgttacagctacagtgttgtccagactagttcctaag
ctatggctgcaaaagttggaattcgagtggggaggagccgagagggccagggactgccgt
gtcagatttactctgagagctactgggagaacagggttctgcgaatacacgagcgaccaa
atgatgctcttaagtacaaccgacacctacgtagggaacaggttctttctacttgggagc
cctaacaccactccactacgcgggcagctcgccagacccaaccaagggcgcgttctgcag
tgggcggctgcagcctccgcactggcccggcagcgcccccttctgtcctccggcggcctg
gcacctgatgtgtcacaggccgcgcgctttttccggttgccatgggttaccagggcggtt
gccatgggttaccggaccgaggccggctggctcgctacctgcagcccagtcgccgccgcc
agcggagcggcccgggcgggacgcggcgggagcgcgcgtgtgcgggacgcagcgcggggg
atgcgcgcgggccgcggaggcgccgcaaccaacaggcggccgagggtgcagccgcgggag
cgccaccgccagtggggtggggggcaaagctataaagaaggcccagagaaaccatttgtt
gaagctgattttggataa

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_6|152_aa
MRFKEPLFYGPPIISPGQSDDSHRGEVGVTVPILQMRTLGLRGHKQQSQDKNPDPQTPAL
TLFLLSPSIKPARLVYIPLSLLPGAPGTKNNMSAILNPRLYTEPGTWYTGSGQLSKQTTP
TIKTTLNQAAFYNSVEAKAPAFKGLIQWRSCL

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_6|459_bp
atgagattcaaggaacccttattttacggtcccccaatcatctctcctggacaaagtgat
gattcccatcgtggtgaggttggtgttacggtccccattttacagatgaggacactgggg
ctgaggggccataagcagcagagccaggataagaatccagatcctcaaacaccagctctg
accctctttctgctctccccctccatcaagcctgcaagactggtttacatcccactgtct
ctcctacccggagctcctggaaccaagaataacatgtcagccatcttgaatccccggctt
tacacagagccaggcacctggtacacaggaagtggccaattaagcaaacaaacaacacca
acaataaaaacaactctcaaccaggccgcattctacaattctgtggaggccaaagctcct
gctttcaaggggcttattcagtggaggagttgcttataa

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_7|115_aa
MYNMRINIVDPVEQNGGNSPKKQGRKGSPNKTTHSDGSFTKATQLPQESETKDSSSMSRE
LEHVVERTVDLKPEDNLGLVMSFSSWGHWAKHMHALNSNSLSFYKMEGDSDVCPH

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_7|348_bp
atgtacaatatgagaattaacattgtcgatcctgtagaacaaaatggtggcaactcacca
aaaaagcagggaagaaaaggctcccccaacaaaacaacacatagtgatggatcttttaca
aaagccacacaattaccccaggaaagtgaaacaaaggattcatcctcaatgagcagagag
ttggagcatgtggtggaaagaaccgtggatttgaagccagaagacaacttaggcctggtt
atgtcatttagcagctggggacactgggcaaagcatatgcatgctctgaacagcaactcc
ttatctttctataaaatggagggagatagtgatgtctgccctcactaa

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_8|219_aa
MEKATREELSPPANSHVSDFDCNLMRNLEPALEFLTDRNYSKVFPNSTKTVNGDHLNLES
GCGQSCVRDLWDAPAPPVGSVAVVIPNAQAQAWAQSLLSRFMGQIPFLAAASQKPCLPVR
LPEAILNDFPQFPLALVLRVLPLGLPQHMVLKQKPMGLEYAEEQLGQFLPVVTLLTSAGC
RAFDLELNASPGQWEHSKLVPAKEASHRKAAAASPQRIP

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_8|660_bp
atggaaaaggctacacgagaggaactgagccctcctgctaacagccatgtgagtgatttt
gattgcaacctcatgagaaaccttgagccagctcttgaattcttgaccgacagaaactat
tccaaagtcttccccaattctacaaaaacagtaaatggcgatcatctgaatttggaatct
ggctgtggacagtcttgtgtgagggacctctgggacgcgcctgctcccccggtggggagt
gtggcagttgtgataccaaatgcacaggctcaagcctgggcgcagtcactcctttccaga
ttcatgggccaaatacctttcctggctgctgcctcacagaagccctgtcttcctgtcagg
cttcccgaggccatcctgaatgacttcccgcagttcccccttgcccttgttctgagagtc
ctgcccttgggcttgccccaacacatggtgctcaaacagaaaccaatgggactggagtat
gcagaggagcagctgggccaattcttaccagttgtcaccctgctgacaagtgcagggtgc
cgagcctttgacttagagctgaatgccagccctggacagtgggaacacagcaagctggtg
cctgctaaggaggcttcccacagaaaagctgctgctgcttcacctcagcgtataccttga

>gi568815591f:26260973_26472569|GENSCAN_predicted_peptide_9|221_aa
MGSSSVDTIEEGCCKEEREMGQELKNAIKQRLFFFFKTREIAAGLYADGIDMTEEQTMKN
VCFTGQGVGEEVLKQHPGGGEGEALVHRRGSAWIAVGDLLAESAGGRADRHRLDEREVKG
SSPPSTGHLQIFDKLTKLFKHWMDLSGIGGAAREAGGVCISSVVVIGEPENLQLPEAGRE
VCTDEAPPSVKNWAVTPVFMIAEIRGLSPCGPQRKPTSMPX

>gi568815591f:26260973_26472569|GENSCAN_predicted_CDS_9|663_bp
atggggtcttccagtgtagacaccattgaagaagggtgctgcaaagaggagagggaaatg
gggcaggagttgaaaaatgcaattaagcaaagacttttttttttttttaagacgagagaa
attgctgcaggtttgtatgctgatgggattgatatgacagaggagcaaacaatgaagaat
gtatgcttcacaggtcagggggtaggggaagaagttctgaaacagcatcctgggggcggt
gagggggaagccctggtgcacaggaggggctcggcctggatagcagtgggagatctgctg
gcagagtcggcgggaggcagggcggacaggcacagattggatgagcgtgaggtcaagggc
agctctcctcctagcactgggcatctacaaatatttgacaaattgaccaagctctttaaa
cactggatggatttaagcggaatcggaggggctgcaagggaggccgggggtgtttgtatt
tcctctgtggtagttatcggtgaaccagagaatcttcagcttcccgaagctggcagagag
gtgtgcactgatgaagcacccccctcagtgaaaaactgggctgtgactccagtcttcatg
atagcagagatacggggactgtcgccttgtggtccccagcgtaagcccaccagcatgcca
cnn