GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:57:19

Sequence gi568815585f:49915494_50120451 : 204958 bp : 39.10% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   6087   5985  103  0  1  105  103    17 0.236   3.73
 1.03 Intr -  12592  12426  167  2  2   62   89   148 0.818  11.06
 1.02 Intr -  15641  15525  117  0  0   54   77    67 0.717   1.72
 1.01 Init -  20742  20637  106  0  1   91   82   131 0.988  11.27
 1.00 Prom -  36271  36232   40                              -1.85

 2.04 PlyA -  36728  36723    6                               1.05
 2.03 Term -  40029  39458  572  1  2   19   48   248 0.736   7.51
 2.02 Intr -  40960  40718  243  2  0 -209   53   428 0.670   6.15
 2.01 Init -  41895  41799   97  0  1   78   66    53 0.321   2.62
 2.00 Prom -  42943  42904   40                              -6.25

 3.06 PlyA -  43017  43012    6                               1.05
 3.05 Term -  62881  62754  128  2  2  133   43    86 0.834   6.06
 3.04 Intr -  73567  73423  145  1  1   57   99    44 0.552   1.33
 3.03 Intr -  78468  78300  169  2  1   67  108   164 0.980  15.33
 3.02 Intr -  81834  81581  254  0  2   87   88   314 0.236  26.61
 3.01 Init -  86003  85989   15  2  0   30  111     5 0.311  -2.63
 3.00 Prom -  86125  86086   40                              -6.45

 4.00 Prom +  91385  91424   40                              -4.75
 4.01 Init +  96448  97569 1122  0  0   63   61   672 0.043  56.26
 4.02 Intr + 100481 100578   98  1  2   87   68    49 0.333   0.69
 4.03 Term + 104721 104961  241  0  1  109   45   168 0.999   9.11
 4.04 PlyA + 105395 105400    6                               1.05

 5.00 Prom + 107679 107718   40                              -5.65
 5.01 Init + 136366 136612  247  0  1  114   86    23 0.549   2.51
 5.02 Term + 137536 137633   98  2  2  115   39    85 0.626   3.45
 5.03 PlyA + 139587 139592    6                               1.05

 6.00 Prom + 159430 159469   40                              -4.15
 6.01 Init + 165890 166086  197  1  2   79   38   194 0.604  11.95
 6.02 Term + 166678 166786  109  1  1   87   45    93 0.329   1.90
 6.03 PlyA + 167573 167578    6                               1.05

 7.05 PlyA - 167604 167599    6                               1.05
 7.04 Term - 171562 171443  120  1  0   84   43    84 0.163   0.99
 7.03 Intr - 184048 183957   92  2  2   76   75    43 0.121   0.59
 7.02 Intr - 184351 184181  171  2  0   -1  100   180 0.114   9.29
 7.01 Init - 198106 198001  106  1  1   47  116    44 0.298   3.53
 7.00 Prom - 200725 200686   40                              -2.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  96448  97671 1224  0  0   63   38   683 0.870  56.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_1|165_aa
MATSVLCCLRCCRDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGRRICGTGGCLASAPL
HQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPA
NSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVVYX

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_1|495_bp
atggccacctcggtgttgtgctgcctgcggtgctgcagagacggggggactggccacatc
cctctgaaggagatgccggccgtgcagctggacacgcagcacatgggaacagatgttgtt
attgtaaagaatggaagaagaatatgtggaacaggaggttgtttagccagcgcaccttta
catcaaaacaaaagctattttgaattcaaaatccagtccacaggaatctggggtattggt
gttgcaactcagaaggttaacttgaatcagattcctcttggccgagatatgcacagtctg
gtgatgagaaatgatggagccctttaccacaacaatgaagagaaaaataggctgccagca
aacagtcttccgcaggaaggagatgtggtgggtattacttatgaccatgtcgaattaaat
gtatacttgaatggaaaaaacatgcattgtccagcatcaggtatacgagggacagtgtat
ccagttgtttatgnn

>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_2|303_aa
MISLVDLKLCWSNNGHSLCKEESLSPILPTSDGEERRRKRKKRKRKKRKQKQQQQQEAAA
PAEADAEATAAEAAAEEAAARKEEEEEGEEGEGNGEEEEEKAAAAARGDWSQQEKACKSS
LQAILFGHAKLEPGRLPRPTQCRVEATVLVGTNSPLDNPLWSISWSLWQKPVGTSQQQPL
GLWTREFPLEGHLLTRNETFTEATPLIPEIGMLSQMMSEEHSNGDGSAQKSSMTQWKWFI
EDHATQGMQRISFPLGLTLELCEKLLDSTVPNKQLSTDQTRASWFMDGNSKAQNARKNCS
VSQ

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_2|912_bp
atgatctccctggttgatcttaagctctgctggtcaaataacggacattccttgtgtaaa
gaggagagcctctcaccaatcctccctaccagtgatggagaagaaaggagaagaaaaagg
aagaagaggaagaggaagaagaggaagcagaagcagcagcagcagcaagaagcagcagca
ccagcagaagcagatgcagaagcaacagcagcagaagcagcagctgaagaagcagcagca
agaaaggaggaggaggaggaaggggaggagggggaggggaatggggaggaggaggaggag
aaggcagcggcggcagcaagaggggactggtcccagcaggagaaggcatgtaaatcgtcc
cttcaagcaatattatttggacatgctaagctggaaccagggagactgcccaggcccaca
cagtgcagagtagaagctacggtgctggtagggacaaattctccacttgataaccctcta
tggagcatttcctggagcttatggcaaaagcctgtgggcacctcccagcaacaaccactg
ggactttggactagagaatttccacttgaagggcatttactgactcgcaatgaaacattt
actgaagccaccccactgatacctgaaataggcatgctgtctcagatgatgtcagaggaa
cattctaatggggatggcagtgcccagaagagttccatgacacaatggaaatggtttata
gaggatcatgctactcaaggcatgcagagaatttcttttcccctaggactgactctggaa
ctgtgtgagaaactgctggattctacagtgccaaataaacaactttcaactgaccaaaca
agagcttcttggtttatggatggcaattccaaggcacaaaatgctaggaagaactgttct
gtttctcagtaa

>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_3|236_aa
MFTSLAAPPQAHDSAPLVSAALPDWSSDGLRQPPQPTQIPADLGNSPPSLKVRGPPRFPE
RSRAAGTYLRPPASGKGRATARPPTTGTARTATGKLPLEKDDCPTKTCIHSYILPWKSTV
ELDPSTDSTGIVNILVTLKFPSTDLQAFGLALVLPEAHTASSSRAPAPLVPSLTRPSPAT
SHPHPPTIAQLTVSGRASKTDGSEVLHLRAALALRAGQGLSGPLTGPQDCPFPQHA

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_3|711_bp
atgttcactagcttggccgctcctccccaggcccatgacagtgccccgctggtttctgcc
gcgctgccggactggagctcagacggccttcgccagcccccccaacccacgcagatccct
gctgacctgggcaactccccaccctcgctgaaggttcgaggaccaccccgctttcccgag
aggagccgggcggcgggtacttatctccgacctccggctagtgggaaaggccgcgcgacc
gcccgtcctccaactacagggaccgcacgaacagcgactgggaaactgccactagaaaaa
gatgactgtccaactaaaacctgcatacacagctacatccttccctggaagagcacagtg
gaactagatcctagtacagatagcacagggattgtcaacattcttgtcacactgaaattt
ccttctactgatctccaagcatttgggttagcccttgtgttacccgaggctcatactgct
tccagcagcagggctcctgcacccttagttccttccctaacgaggccctcaccagccacc
tcccatccccatcctccaaccatagcacaactgacagtctcaggtagggcctctaaaacc
gatggaagtgaagtgctacacctcagagctgctttagcccttagagctggccagggtctg
agtgggcctctcacagggccacaggactgccctttcccccagcatgcctag

>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_4|486_aa
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
TADFIEQSVFYWEQMTLLPLPPQRPSYHDLVFQCGSDSTTDNQTGVRYVSIKPDNRKLAN
GTNVLGLLIDTLLKEGFHLVSTRTVSSEDKTECYSFERIKSPEVLITNETPKPETIIIPE
QSQIKK

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_4|1461_bp
atggagctgcttgaagaagatctcacatgccctatttgttgtagtctgtttgatgatcca
cgggttttgccttgctcccacaacttctgcaaaaaatgcttagaaggtatcttagaaggg
agtgtgcggaattccttgtggagaccagctccattcaagtgtcctacatgccgtaaggaa
acttcagctactggaattaatagcctgcaggttaattactccctgaagggtattgtggaa
aagtataacaagatcaagatctctcccaaaatgccagtatgcaaaggacacttggggcag
cctctcaacattttctgcctgactgatatgcagctgatttgtgggatctgtgctactcgt
ggggagcacaccaaacatgtcttctgttctattgaagatgcctatgctcaggaaagggat
gcctttgagtccctcttccagagctttgagacctggcgtcggggagatgctctttctcgc
ttggataccttggaaactagtaagaggaaatccctacagttactgactaaagattcagat
aaagtgaaggaattttttgagaagttacaacacacactggatcaaaagaagaatgaaatt
ctgtctgactttgagaccatgaaacttgctgttatgcaagcatatgacccagagatcaac
aaactcaacaccatcttgcaggagcaacggatggcctttaacattgctgaggctttcaaa
gatgtgtcagaacccattgtatttctgcaacagatgcaggagtttagagagaaaatcaaa
gtaatcaaggaaactcctttacctccctctaatttgcctgcaagccctttaatgaagaac
tttgataccagtcagtgggaagacataaaactagtcgatgtggataaactttctttgcct
caagacactggcacattcattagcaagattccctggagcttttataagttatttttgcta
atccttctgcttggccttgtcattgtctttggtcctaccatgttcctagaatggtcatta
tttgatgacctggcaacttggaaaggctgtctttcaaacttcagttcctatctgactaaa
acagccgatttcatagaacaatcagttttttactgggaacagatgaccttacttccactg
cctccacaaagaccttcttaccatgacctggttttccagtgtggttctgacagcactact
gataaccaaactggagtcaggtatgtttctataaaacctgataaccgaaaattggccaac
ggaacaaatgtcctcggcttactgattgacactttattaaaggaaggctttcatttggtc
agcactagaacagtatcttctgaagacaaaactgaatgctatagctttgaaaggataaaa
agccctgaagtgctcatcacgaatgaaacaccaaaaccagagactatcatcataccagag
caatctcagataaagaaatga

>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_5|114_aa
MPSPGWVFNADKYALFWKKMPQRTFISKEEKQAPGFKAGRDRQTLLFCANAVGLLPLAIK
LLIPEPQREKTPAASLLVVQQEETAKPTPFLPQPAQCENSEDEGLYDDPLPFNQ

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_5|345_bp
atgcccagcccaggatgggtttttaatgctgataaatatgccctattctggaagaaaatg
ccacaaaggacatttattagtaaggaagaaaagcaagcaccaggatttaaggcaggaaga
gataggcaaactctactgttctgtgcaaatgcagtcggtttgctgcccttagccataaag
ctgctaatccctgagcctcaaagggaaaaaacaccagcagccagtcttttggttgtacaa
caagaagagacagcaaaaccaaccccttttcttcctcagcctgctcaatgtgaaaacagt
gaagatgaaggcctgtatgatgatccacttccatttaatcaatag

>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_6|101_aa
MTAITGSRKRREKAARFGNGGGARVQSSCQGAAACRDPAVRRPRLRSRAGGLADRSAGRR
LLRRSRHMRRIIVVHGSPFASSVAVLLLLARACSAFAKPRR

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_6|306_bp
atgacggccatcaccgggtcgagaaaacggcgagaaaaggcggcccggttcggaaatggg
ggaggggcgcgcgtccagtcctcctgtcaaggagcggccgcctgcagagaccccgcagtg
cgccgtccccggctccggtcccgggcggggggtcttgctgacagatccgctgggcggcgg
ctgctccgccgcagccggcacatgcgcagaatcatcgtggtgcacggctctccctttgct
tcttcggttgcagtcctcttgcttcttgcgcgtgcgtgtagcgcttttgcaaagccgcgg
aggtga

>gi568815585f:49915494_50120451|GENSCAN_predicted_peptide_7|162_aa
MTLQGKSYFQLLPQETFFTDRKILPEPHIADQNEQASDVLEFLVPGVDTGLSVAMLGSQG
LAEMPVHFLALVRPREQDGATAFEGVQGQLVKGSFIFQIIQERDRDGHLVQLINNLFTTT
WLKLLELMNYSLAHGLLPPSESAMAFSHLIIDTDSSASPLHT

>gi568815585f:49915494_50120451|GENSCAN_predicted_CDS_7|489_bp
atgaccctacaaggtaaatcttatttccagttacttccacaagaaaccttttttactgat
cgtaaaatcttacctgaacctcacatagctgatcaaaatgaacaagcctctgatgtgctt
gaatttctggtccctggagtggacacagggcttagtgtggctatgctgggttcccagggc
cttgctgaaatgccagtacacttcttggcccttgtgaggcccagagagcaggatggtgcc
acagcctttgagggtgtccagggtcagctggtcaaaggaagcttcatcttccagatcatc
caggaaagagacagagatggccatttggtgcaactcataaataacctcttcaccacaact
tggttgaagcttctagagctcatgaactattctttggctcatggcctccttccaccttca
gagtcagcaatggctttctcacatctcatcattgacacggattcttctgcttccccttta
cacacttaa