GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:19:51

Sequence gi568815583f:72039624_72240259 : 200636 bp : 44.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1570   1565    6                               1.05
 1.02 Term -   2114   1662  453  2  0   22   36   348 0.729  18.16
 1.01 Init -   6940   6101  840  1  0   59   84   436 0.821  34.99
 1.00 Prom -   7566   7527   40                              -8.96

 2.00 Prom +   8021   8060   40                             -10.35
 2.01 Init +   9914   9980   67  1  1   86   82   116 0.990  12.03
 2.02 Intr +  14610  14715  106  1  1   54  108    73 0.357   5.17
 2.03 Term +  63557  64076  520  2  1    3   43   912 0.632  71.97
 2.04 PlyA +  64687  64692    6                               1.05

 3.00 Prom +  72900  72939   40                              -5.06
 3.01 Init +  88328  88373   46  1  1   92   81     1 0.264   0.68
 3.02 Term +  99954 100639  686  1  2   77   37   339 0.410  21.50
 3.03 PlyA + 103676 103681    6                               1.05

 4.18 PlyA - 105789 105784    6                               1.05
 4.17 Term - 109355 109336   20  0  2  143   49   -12 0.095  -1.12
 4.16 Intr - 119917 119835   83  0  2   55   64    64 0.176  -0.02
 4.15 Intr - 121454 121293  162  1  0   82   39    79 0.540   1.49
 4.14 Intr - 121761 121633  129  2  0   15   97    83 0.697   1.71
 4.13 Intr - 122754 122650  105  2  0   75   94    87 0.989   7.33
 4.12 Intr - 123770 123643  128  2  2   39   87   118 0.748   6.28
 4.11 Intr - 124134 124102   33  0  0   75   91    26 0.396   0.02
 4.10 Intr - 125787 125731   57  0  0  117   85    32 0.806   4.88
 4.09 Intr - 127469 127371   99  2  0   71   86   102 0.979   8.61
 4.08 Intr - 128216 128080  137  0  2   48   48   128 0.640   5.09
 4.07 Intr - 128943 128868   76  0  1   64  105    71 0.687   5.49
 4.06 Intr - 129498 129316  183  0  0   83   98     7 0.194   1.18
 4.05 Intr - 133292 133102  191  0  2  108   80    36 0.756   4.10
 4.04 Intr - 136204 136086  119  0  2   66  103    84 0.901   7.81
 4.03 Intr - 140182 140022  161  1  2   55   42    79 0.768  -1.21
 4.02 Intr - 141178 140989  190  0  1  108   90    60 0.816   7.79
 4.01 Init - 148200 148193    8  0  2   51   92    11 0.313  -2.48
 4.00 Prom - 152454 152415   40                              -0.46

 5.15 PlyA - 154786 154781    6                               1.05
 5.14 Term - 160133 160027  107  0  2  137   45   154 0.999  14.57
 5.13 Intr - 161032 160851  182  0  2  100   84   216 0.997  21.91
 5.12 Intr - 161457 161305  153  2  0  100   98    22 0.918   3.59
 5.11 Intr - 162997 162831  167  1  2   82   91   189 0.998  17.36
 5.10 Intr - 163336 163264   73  0  1   81   30     6 0.611  -6.49
 5.09 Intr - 163565 163399  167  2  2   91   91   201 0.959  19.46
 5.08 Intr - 167257 167105  153  1  0  102  105   196 0.944  22.97
 5.07 Intr - 169268 169006  263  0  2  120  -19   432 0.514  32.91
 5.06 Intr - 170236 170050  187  1  1  117  102   365 0.999  40.06
 5.05 Intr - 170855 170724  132  2  0   95   69   220 0.999  21.64
 5.04 Intr - 177877 177786   92  2  2   74   83    79 0.986   5.71
 5.03 Intr - 179487 179321  167  2  2   88   97   246 0.915  25.10
 5.02 Intr - 181661 181545  117  1  0   78   86    62 0.650   4.58
 5.01 Init - 189003 188954   50  0  2   84   92    29 0.261   3.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  43675  43460  216  1  0   58   47   133 0.818   3.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:72039624_72240259|GENSCAN_predicted_peptide_1|430_aa
MNINDGGRRRFEDNEHTLRIYPGAISEGTIYCPIPARKNSTAAEVIESLINKLHLDKTKC
YVLAEVKEFGGEEWILNPTDCPVQRMMLWPRMALENRLSGEDYRFLLREKNLDGSIHYGS
LQSWLRVTEERRRMMERGFLPQPQQKDFDDLCSLPDLNEKTLLENLRNRFKHEKIYTYVG
SILIVINPFKFLPIYNPKYVKMYDNHQLGKLEPHIYAVADVAYHAMLQRKKNQCIVISGE
SGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEGTCAGTQVKGALCLLKVPTE
KLPSPQLTMVYEIDLTTGDAGASSTHPMQCSTLRKSDFMMFKGQPCKIVKMLTSKTGKLG
HAKVHLVGIAVFMGKKEEEDICPSVHNVDVPNIQRHDYQLICIQDSCLSLPTEADEVPED
LKLPESELGK

>gi568815583f:72039624_72240259|GENSCAN_predicted_CDS_1|1293_bp
atgaatataaatgatggaggaagacgacgctttgaagataatgaacatacattacggata
tatcctggggctatttcagaagggacaatctactgtccgattcctgccagaaaaaactcc
acagctgctgaggtgattgagtctcttataaacaaacttcatcttgacaaaacaaaatgt
tatgttctagcagaggtaaaggaatttggtggagaagaatggattctcaatccaacagat
tgtccagttcagcgaatgatgctgtggccccgaatggctctggaaaatcgcttaagtgga
gaggactaccgcttccttctgagagagaaaaaccttgatggatcaatccattatggtagc
ctgcagtcatggctacgggtaacagaagaacgtcgcaggatgatggaacggggttttctt
ccacagcctcaacagaaagactttgatgatttatgtagtttacctgatttgaatgagaaa
actctcttagaaaacctacgaaatcgctttaagcatgaaaaaatttatacctatgttggc
agtattctaatagttattaacccattcaagtttcttcctatttataaccccaaatatgtc
aaaatgtatgataaccaccaactgggaaaacttgagccccacatttatgctgtggctgat
gtagcttatcatgccatgcttcagcgcaaaaagaatcagtgcatcgtgatttcaggagag
agtggttctgggaagactcaaagcacaaactttcttattcaccaccttactgctctcagt
cagaaaggatttgccagtggagtagaacagattattcttggagctggaccagtacttgag
gggacctgtgcaggtacgcaggtgaaaggagctctttgcctgctgaaagttcccacggaa
aaactaccatctccccagctcaccatggtgtacgaaattgatttaactactggagatgct
ggggcttccagcactcaccctatgcagtgctcaaccttgcggaaaagtgacttcatgatg
ttcaaaggacaaccatgcaaaatagtgaagatgttaacttccaaaactggaaaacttggt
catgccaaggttcaccttgttggaattgctgttttcatgggaaaaaaagaagaagaagat
atttgtccttctgttcacaacgtggatgttccaaatattcagagacatgattatcaactg
atatgcattcaagatagttgcctttccctgccgacagaagctgatgaagttcctgaggat
cttaaactgccagaaagtgaactaggcaaataa

>gi568815583f:72039624_72240259|GENSCAN_predicted_peptide_2|230_aa
MDQCQSMACQKLGRTAEDEQQASLGLRERSLDITGILEKKYKTEKDYKKLRRKPQSGKVR
LSLKKKKKQQQKQKQQQKQQQQKEKQRQQQKQQQAAAAEAEAAASSSSRSRSSSKQRQKQ
QQKQKQQQQKQQQAASSSRSSSSRSRSSSRRRSSSRSRSSAEAEAVAAEAAEAVEAEAAE
AVEAEAAEAVEAEAAEAVEAEEATEEAEEETEEAEVTEEAAAEAEEFHKY

>gi568815583f:72039624_72240259|GENSCAN_predicted_CDS_2|693_bp
atggaccagtgccagtccatggcctgtcagaaactgggccgcacagcagaagatgagcag
caggcaagcttaggcctgagagaaaggtctctggatatcactggtattcttgaaaagaag
tacaaaacagaaaaagattacaagaagttaaggaggaagccacagagtggcaaagtaaga
ctaagtctcaagaaaaaaaaaaagcagcagcagaagcagaagcagcagcagaagcagcag
cagcagaaggagaagcagaggcagcagcagaagcagcagcaagcagcagcagcagaagca
gaagcagcagcaagcagcagcagcagaagcagaagcagcagcaagcagagacagaagcag
cagcagaagcagaagcagcagcagcagaagcagcagcaagcagcaagcagcagcagaagc
agcagcagcagaagcagaagcagcagcagaagaagaagcagcagcagaagcagaagcagc
gcagaagcagaagcagtggcagcagaagcagcagaagcagtggaagcagaagcagcagaa
gcagtggaagcagaagcagcagaagcagtggaagcagaagcagcagaagcagtggaagca
gaagaagcaacagaagaagcagaagaagaaacagaagaagcagaagtaacagaagaagca
gcagcagaagcagaagaatttcacaaatactga

>gi568815583f:72039624_72240259|GENSCAN_predicted_peptide_3|243_aa
MVVCTYSAYSYLEGQALVQLLEFLSSPRQYKMDPVVLSYMDSLLRQSDVSLLDPPSWLND
HIIGFAFEYFANSQFHDCSDHVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLA
INDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAF
VEEKAPAQQNSYDCGMYVICNTEALCQNFFRQQTESLLQLLTPAYITKKRGEWKDLITTL
AKK

>gi568815583f:72039624_72240259|GENSCAN_predicted_CDS_3|732_bp
atggtggtatgcacgtatagtgcatatagctacttggaaggccaagctcttgttcagctt
ctggaatttctgagcagccctcgtcagtacaagatggaccccgtagtcttgagttacatg
gacagtctactgcggcaatcagatgtctcactattggatccgccaagctggctcaatgac
catattattgggtttgcgtttgagtactttgccaacagtcagtttcatgactgctctgat
cacgtcagtttcatcagccctgaagtcacccagttcatcaagtgcactagcaacccagca
gagattgccatgttccttgaaccactggacctccccaacaagagagttgtatttttagcc
atcaatgataactccaaccaggcagctggaggaacccactggagtttattggtctacctc
caagataaaaatagcttttttcattatgattcccatagcaggagcaactcagttcacgca
aagcaggtagcagagaaactggaggctttcttaggcagaaaaggagacaaactggccttt
gtggaagagaaagcccctgcccaacaaaacagctatgactgtgggatgtacgtgatatgt
aacactgaggccttgtgtcagaacttctttaggcaacagacagaatcactgctgcagcta
ctcacccctgcatacatcacaaagaagaggggagaatggaaagatctcattaccacactt
gctaaaaagtag

>gi568815583f:72039624_72240259|GENSCAN_predicted_peptide_4|626_aa
MARGVTEAQKGRVAYSKPLSSEKQFQACIPVFLSPTPGSFRTPRPFTLACGPEKSLMDPQ
SQSNSEVSFKDVMGQRLTQRSPVLVGDVLLNGQGYGCPQPHPRLSQDLLQILTVALTICS
KHWVLAVCWGYRDVRDTPLLELRVNWGTQMCKQTSTLWCGLSCERTETKRETYMEEIDGI
SHAVITHRHSRNTTDKRETTNWGKHHKNDKLRINVLNKEFTGQRRVLVSDLCLKLLAQGQ
GRIGTEDAWAGLGFLVPEMECLLCSLHWPEGLKGEEIKKCGREGITLNKYNQQYHKLFKD
VPLEEVVLKVCSCALQRDFLLQGRLYISPNWLCFHASLFGKDIKVVMSGEGCHDPVVIPV
VSVQMIKKHKMARLLPNGLAITTNTSQKPSSKKSLSVREFSGEPESLEVLIPEMKWRKKM
PNCSPTAKNAVYEEDELEEEPRSTGELRLWDYRLLKVFFVLICFLVMSSSYLAFRISRLE
QQLCSLSWDDPVPGHRALCRPLMRWLAALWGDAAHGGDGGSGCEEQRYLNSVSSAVTFRH
GQQQPVEGGLSGQLRVMVLSHHRAEVTCVTPIVIGLQAMEEGPPLHGAYSPLRIMPLIQE
LTYGVQSQKARVAFSMTQSLCLILFL

>gi568815583f:72039624_72240259|GENSCAN_predicted_CDS_4|1881_bp
atggccagaggagtcactgaggcccagaaaggaagagtggcttactcaaagcccctcagc
agtgagaagcagttccaggcctgcattcctgtcttcctgtccccaactccaggctctttc
aggaccccaagacccttcacacttgcctgtggtcctgagaagagcctgatggatccacaa
agccagagtaattctgaggtatccttcaaggatgtgatgggacagaggctaacacagcgc
tcaccagtgctagtcggggacgtcctgctcaatgggcagggttatgggtgtccccagccc
caccccagactgagtcaagacctcttgcagatcctcacagtagccctgacgatctgcagc
aaacactgggtgctggctgtatgctggggatacagagatgtacgggacacgcccttgctg
gagctcagagtcaactgggggacacagatgtgtaaacagacaagcacactctggtgtggc
ctgtcctgtgagaggactgagaccaagcgagaaacatacatggaagaaatagatggaatc
tcccatgcagtaattacacacaggcacagcagaaataccacagacaaaagagaaacgaca
aactggggaaaacatcacaaaaatgataaactaaggattaacgttctcaataaagaattt
acaggccagagaagggtcctagtctctgatctctgcctcaagcttctggctcaaggccag
ggcagaattggcactgaggatgcatgggcaggactggggttccttgttcccgaaatggaa
tgtctcctttgcagtctgcactggccagaaggcttgaagggtgaagagataaagaagtgt
ggccgagaagggataacactgaataaatacaaccagcaataccacaagctgtttaaggat
gttcccttggaggaagtggttctcaaagtgtgttcctgtgccctccagagggacttcctc
ctccagggccggctctacatctcccccaactggctctgcttccatgccagcctctttggc
aaggatatcaaggtagtaatgagtggtgagggctgccatgaccctgtggtcattcctgtg
gtgtctgtgcaaatgatcaaaaaacacaagatggcacggctccttcccaatggactggcc
atcaccaccaacaccagccagaagccttccagcaagaagagtctgagtgtaagagaattt
tcaggggaacctgagtctctggaagtcctcatccctgagatgaagtggagaaagaagatg
ccgaactgctctcccactgcaaagaatgctgtctatgaggaggatgagctggaggaggag
cccaggagcactggggagctgaggctctgggattaccggctcctcaaggtcttctttgtg
ctgatctgcttcctggtcatgtcctcatcctacctggcgttccgtatttctcggctagag
cagcagttatgctccttgagttgggatgacccagtccctgggcacagggctctgtgccgg
cccctcatgaggtggctggctgcattatggggagatgctgcccacggcggagatggtggc
agtggctgtgaagaacagaggtacctgaattctgtgtcctcagctgtcactttccggcat
ggccaacagcagcccgttgaggggggcttgtctggacagttgcgtgtgatggtgttgagc
catcacagggcagaggtcacttgtgtcacccccatagtcattgggttgcaggccatggag
gagggacctccactccatggggcctattctccattaaggattatgcctctgatccaggaa
ttaacatacggagttcagagccagaaagctcgtgtggccttttctatgacccagagccta
tgcctcattctctttctctag

>gi568815583f:72039624_72240259|GENSCAN_predicted_peptide_5|669_aa
MTQPFNYSAFERIIFAGSPGHTVFSSERSLLVRPRSHPEPKGEHYVTGSPTPENQRTSAA
MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET
LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR
TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL
ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV
FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGMLESMIKKPRPTRAEGSDVANAVL
DGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELVRASSHSTDLMEAMA
MGSVEASYKCLAAALIVLTESGRRRQPGPTWHLGTEPLLVCRNTAREIAREAEAAIYHLQ
LFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRCQESGASHVLLGLSLSL
AARGMGAGDIGPGLPLCVRVQGVGGVLPTMGCVGSAHQVARYRPRAPIIAVTRNPQTARQ
AHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFT
NTMRVVPVP

>gi568815583f:72039624_72240259|GENSCAN_predicted_CDS_5|2010_bp
atgactcaacctttcaattattctgcttttgagagaattatcttcgctggctctccaggg
cacaccgtattcagctctgagcggtctttgctagtgaggccaaggagccaccctgagcca
aaaggggagcattatgtcaccggaagcccaaccccagagaaccaaaggacctcagcagcc
atgtcgaagccccatagtgaagccgggactgccttcattcagacccagcagctgcacgca
gccatggctgacacattcctggagcacatgtgccgcctggacattgattcaccacccatc
acagcccggaacactggcatcatctgtaccattggcccagcttcccgatcagtggagacg
ttgaaggagatgattaagtctggaatgaatgtggctcgtctgaacttctctcatggaact
catgagtaccatgcggagaccatcaagaatgtgcgcacagccacggaaagctttgcttct
gaccccatcctctaccggcccgttgctgtggctctagacactaaaggacctgagatccga
actgggctcatcaagggcagcggcactgcagaggtggagctgaagaagggagccactctc
aaaatcacgctggataacgcctacatggaaaagtgtgacgagaacatcctgtggctggac
tacaagaacatctgcaaggtggtggaagtgggcagcaagatctacgtggatgatgggctt
atttctctccaggtgaagcagaaaggtgccgacttcctggtgacggaggtggaaaatggt
ggctccttgggcagcaagaagggtgtgaaccttcctggggctgctgtggacttgcctgct
gtgtcggagaaggacatccaggatctgaagtttggggtcgagcaggatgttgatatggtg
tttgcgtcattcatccgcaaggcatctgatgtccatgaagttaggaaggtcctgggagag
aagggaaagaacatcaagattatcagcaaaatcgagaatcatgaggggatgctggagagc
atgatcaagaagccccgccccactcgggctgaaggcagtgatgtggccaatgcagtcctg
gatggagccgactgcatcatgctgtctggagaaacagccaaaggggactatcctctggag
gctgtgcgcatgcagcacctgatagctcgtgaggctgaggcagccatgttccaccgcaag
ctgtttgaagaacttgtgcgagcctcaagtcactccacagacctcatggaagccatggcc
atgggcagcgtggaggcttcttataagtgtttagcagcagctttgatagttctgacggag
tctggcaggagaagacagccaggcccaacctggcatctgggcacagagcctcttctcgtc
tgtaggaacaccgccagggagattgcccgtgaggcagaggctgccatctaccacttgcaa
ttatttgaggaactccgccgcctggcgcccattaccagcgaccccacagaagccaccgcc
gtgggtgccgtggaggcctccttcaagtgctgcagtggggccataatcgtcctcaccaag
tctggcagatgtcaagagtcaggtgctagtcacgtgctgcttggcttgtcactgtcattg
gcagcgagaggaatgggtgctggtgacattgggccagggctgcctctctgtgtcagagtt
cagggtgtaggaggggttctgccaaccatgggctgtgtggggtctgctcaccaggtggcc
agataccgcccacgtgcccccatcattgctgtgacccggaatccccagacagctcgtcag
gcccacctgtaccgtggcatcttccctgtgctgtgcaaggacccagtccaggaggcctgg
gctgaggacgtggacctccgggtgaactttgccatgaatgttggcaaggcccgaggcttc
ttcaagaagggagatgtggtcattgtgctgaccggatggcgccctggctccggcttcacc
aacaccatgcgtgttgttcctgtgccgtga