GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:28:35

Sequence gi568815586r:7589881_7795728 : 205848 bp : 44.15% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2629   2668   40                              -3.26
 1.01 Sngl +   5632   6054  423  0  0   58   49   229 0.974  12.30
 1.02 PlyA +   6239   6244    6                               1.05

 2.00 Prom +   9979  10018   40                              -2.46
 2.01 Init +  21960  22294  335  2  2   73   81   149 0.646   9.47
 2.02 Term +  38805  38985  181  0  1   10   49   225 0.242   7.88
 2.03 PlyA +  41526  41531    6                               1.05

 3.03 PlyA -  41874  41869    6                               1.05
 3.02 Term -  50066  49795  272  0  2   63   42   130 0.798   1.55
 3.01 Init -  50349  50175  175  0  1   79   97   140 0.760  11.51
 3.00 Prom -  57466  57427   40                              -4.26

 4.04 PlyA -  57601  57596    6                               1.05
 4.03 Term -  61389  61364   26  1  2  107   38    24 0.305  -2.31
 4.02 Intr -  62955  62558  398  2  2   89   98   185 0.750  13.82
 4.01 Init -  80169  80117   53  0  2  107   59    26 0.230   2.23
 4.00 Prom -  97853  97814   40                              -5.16

 5.03 PlyA -  97880  97875    6                               1.05
 5.02 Term - 100824  99998  827  1  2  137   45   535 0.947  47.33
 5.01 Init - 105848 105581  268  2  1   72  116   150 0.924  12.16
 5.00 Prom - 113900 113861   40                              -5.06

 6.00 Prom + 115656 115695   40                              -0.86
 6.01 Init + 121691 121772   82  1  1   60  115    61 0.835   7.13
 6.02 Term + 123403 123506  104  2  2   77   38    27 0.253  -4.96
 6.03 PlyA + 123615 123620    6                              -0.45

 7.05 PlyA - 124819 124814    6                               1.05
 7.04 Term - 125454 125310  145  2  1   51   54    96 0.332  -0.12
 7.03 Intr - 126795 126658  138  2  0   85  110    55 0.399   6.98
 7.02 Intr - 141032 140917  116  2  2  134   94    26 0.838   7.05
 7.01 Init - 147590 147549   42  2  0   59   91    56 0.810   3.43
 7.00 Prom - 148597 148558   40                              -5.26

 8.04 PlyA - 148637 148632    6                              -0.45
 8.03 Term - 149695 149535  161  2  2   60   47    90 0.891   0.20
 8.02 Intr - 151651 151541  111  2  0   63   82    87 0.480   5.95
 8.01 Init - 157468 157438   31  1  1   77   99    35 0.806   3.40
 8.00 Prom - 163622 163583   40                              -5.66

 9.00 Prom + 167583 167622   40                              -3.06
 9.01 Init + 180115 180435  321  0  0   56   80   172 0.437  10.54
 9.02 Intr + 197838 197963  126  2  0   37  109    49 0.011   2.78
 9.03 Intr + 203108 203332  225  1  0   68   96   107 0.692   7.68
 9.04 Intr + 204577 204663   87  0  0   99   92    61 0.874   7.77
 9.05 Term + 204799 205215  417  0  0  113   49   167 0.477  10.58
 9.06 PlyA + 205757 205762    6                              -3.64


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  14127  14193   67  2  1   88  111    21 0.816   2.88
S.002 Term +  17332  17456  125  2  2   42   49   103 0.804   0.35
S.003 Init + 197862 197963  102  2  0   70  109    78 0.846   8.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_1|140_aa
MELKNTARELHEAYTSFNSRIDQEEERISVIGDQLNEIKREDKIREKRMKRNEQNLQEIW
DYVKRPNLRLIGVPENDEENKINLENIFQHIIQENFPNLARQANIQIQEIQRTAPRYSSR
RATPRHIIVRFTKVEIRKKY

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_1|423_bp
atggagctgaaaaacacagcacgagaacttcatgaagcatacacaagtttcaatagccga
atcgatcaagaggaagaaagaatatcagtgattggagatcaacttaatgaaataaagaga
gaagacaagattagagaaaaaagaatgaaaaggaatgaacaaaacctccaagaaatatgg
gactatgtgaaaagaccaaatctacgtttgattggtgtacctgaaaatgacgaggagaat
aaaatcaacttggaaaacatttttcagcatattatacaggagaacttccccaacctggca
agacaggccaacattcaaattcaggaaatacagagaacagcaccaagatactcctcaaga
agagcaaccccaagacatataattgtcagattcaccaaggttgaaataaggaaaaaatat
taa

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_2|171_aa
MDKFLETYNLPRLNQEEIESLNRPIMSSKIESVIKSLPTRKSPGLYEFTAKFCQMYKKEL
VPLLQKVFKKIEEEKLFPNSFYEASIILIPKPGRDTQTKRKFLANILNEHISQCRAAAPA
AAAAAPAAAAAAAAPAAAAPAAAAAAAPLALLCGERRGHLQDGGRPFHKPE

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_2|516_bp
atggataaattcctggaaacatacaatctcccaagattgaaccaggaagagattgaatcc
ctgaacagaccaataatgagttccaaaattgaatcagtaataaaaagcctaccaaccaga
aaaagcccaggactatatgaattcacagccaaattctgccagatgtacaagaaagagctt
gtgccattgcttcagaaagtattcaagaaaattgaggaggagaaactttttcctaactca
ttctacgaagccagcatcatcctaataccaaaacctggcagagacacacaaacaaaaagg
aagtttctggccaatatcctcaatgaacatataagtcagtgccgggctgccgcccctgcc
gccgccgccgccgcccctgccgccgccgccgccgccgccgcccctgccgccgccgcccct
gccgccgccgccgccgccgctcctctagcgctcctctgtggagagcgccgcgggcacctg
caagacggggggcgccccttccacaaacccgagtag

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_3|148_aa
MRLHSSALGRSMGLGAVEQGAALVGEAPAAQEPTEAGEGSGMAGCSPKACPAGRQLRPGP
AGCSECGAAKPTPPRNSSWPASAARSPGSRSRVSLHTSLQAEGAGCGLRQPRKGLPQCSG
GLKGSSSAAKVGAQAEEAPRASESCEDC

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_3|447_bp
atgcgcttgcactcctcagcccttgggcggtcgatgggactgggcgccgtggagcagggg
gcggcgctcgtcggggaggctccggctgcacaggaacccacggaggcgggggaaggctca
ggcatggcgggctgcagtcccaaggcctgccccgcgggaaggcagctaaggcccgggccg
gccggctgctccgagtgcggggccgccaagcccacgcccccccggaactccagctggccc
gcaagcgccgcgcgcagccccggttcccgctcgcgcgtctccctccacacctccctgcaa
gctgagggagcgggctgcggccttcgccagcccagaaaggggctcccacagtgcagcggt
gggctgaagggctcctcaagtgccgccaaagtgggagcccaggcagaggaggcgccgaga
gcgagcgagagctgtgaggactgctag

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_4|158_aa
MGPLYSNLGNKSKILSPGRRIEPWEFDVFYDPRELRKEACLLYEIKWGMSRKIWRSSGKN
TTNHVEVNFIKKFTSERDFHPSMSCSITWFLSWSPCWECSQAIREFLSRHPGVTLVIYVA
RLFWHMDQQNRQGLRDLVNSGVTIQIMRASGGLMSSSN

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_4|477_bp
atggggccattgtactccaacctgggcaacaagagcaaaattttgtctccagggagaaga
atcgaaccctgggagtttgacgtcttctatgaccccagagaacttcgtaaagaggcctgt
ctgctctacgaaatcaagtggggcatgagccggaagatctggcgaagctcaggcaaaaac
accaccaatcacgtggaagttaattttataaaaaaatttacgtcagaaagagattttcac
ccatccatgagctgctccatcacctggttcttgtcctggagtccctgctgggaatgctcc
caggctattagagagtttctgagtcggcaccctggtgtgactctagtgatctacgtagct
cggcttttttggcacatggatcaacaaaatcggcaaggtctcagggaccttgttaacagt
ggagtaactattcagattatgagagcatcagggggtctaatgtccagcagcaactag

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_5|364_aa
MLRFLPDLAFSFLLILALGQAVQFQEYVFLQFLGLDKAPSPQKFQPVPYILKKIFQDREA
AATTGVSRDLCYVKELGVRGNVLRFLPDQGFFLYPKKISQASSCLQKLLYFNLSAIKERE
QLTLAQLGLDLGPNSYYNLGPELELALFLVQEPHVWGQTTPKPGKMFVLRSVPWPQGAVH
FNLLDVAKDWNDNPRKNFGLFLEILVKEDRDSGVNFQPEDTCARLRCSLHASLLVVTLNP
DQCHPSRKRRAAIPVPKLSCKNLCHRHQLFINFRDLGWHKWIIAPKGFMANYCHGECPFS
LTISLNSSNYAFMQALMHAVDPEIPQAVCIPTKLSPISMLYQDNNDNVILRHYEDMVVDE
CGCG

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_5|1095_bp
atgcttcgtttcttgccagatttggctttcagcttcctgttaattctggctttgggccag
gcagtccaatttcaagaatatgtctttctccaatttctgggcttagataaggcgccttca
ccccagaagttccaacctgtgccttatatcttgaagaaaattttccaggatcgcgaggca
gcagcgaccactggggtctcccgagacttatgctacgtaaaggagctgggcgtccgcggg
aatgtacttcgctttctcccagaccaaggtttctttctttacccaaagaaaatttcccaa
gcttcctcctgcctgcagaagctcctctactttaacctgtctgccatcaaagaaagggaa
cagttgacattggcccagctgggcctggacttggggcccaattcttactataacctggga
ccagagctggaactggctctgttcctggttcaggagcctcatgtgtggggccagaccacc
cctaagccaggtaaaatgtttgtgttgcggtcagtcccatggccacaaggtgctgttcac
ttcaacctgctggatgtagctaaggattggaatgacaacccccggaaaaatttcgggtta
ttcctggagatactggtcaaagaagatagagactcaggggtgaattttcagcctgaagac
acctgtgccagactaagatgctcccttcatgcttccctgctggtggtgactctcaaccct
gatcagtgccacccttctcggaaaaggagagcagccatccctgtccccaagctttcttgt
aagaacctctgccaccgtcaccagctattcattaacttccgggacctgggttggcacaag
tggatcattgcccccaaggggttcatggcaaattactgccatggagagtgtcccttctca
ctgaccatctctctcaacagctccaattatgctttcatgcaagccctgatgcatgccgtt
gacccagagatcccccaggctgtgtgtatccccaccaagctgtctcccatttccatgctc
taccaggacaataatgacaatgtcattctacgacattatgaagacatggtagtcgatgaa
tgtgggtgtgggtag

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_6|61_aa
MDPSQFNPTYIPGSPQMLTEENSRDDSAVSPASRRKNAGLYIRVGKKNERTPSLSLSLRL
P

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_6|186_bp
atggacccatcacagtttaatccaacctacatcccagggtctccacaaatgctcaccgaa
gaaaattcccgggacgattcagctgtgtcccctgcgtccagaagaaagaatgctggtcta
tatatccgagtgggaaagaaaaatgaacgtacccccagtctctccctttccttgcgtctg
ccttag

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_7|146_aa
MGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENVTHSAEVFV
LLLYSATVKIFVTARESINLTPRVTPSVNYELWMIILSGHSSSISLRTAAPTDSRRSKAS
DRGETDSLLALIVKLLRFFINVSEEI

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_7|441_bp
atgggggctgatctggtggtgatcaacaccagggaagaacaggatttcatcattcagaat
ctgaaaagaaattcttcttattttctggggctgtcagatccagggggtcggcgacattgg
caatgggttgaccagacaccatacaatgaaaatgtcacacactctgctgaagtgtttgtc
ctcttactatacagtgctaccgtgaagatatttgtgacagcacgtgaaagtatcaaccta
acaccaagagtgacccctagtgtaaactatgaactctggatgataatcctgtcaggccac
tcatcttcgatttccctgaggactgctgctcctacagactctcgacggagtaaagcttcc
gatagaggggaaacagattcgctactagcgttgatagtcaagttactaaggttctttatc
aacgtctcggaggagatttga

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_8|100_aa
MVPEEEPQDRVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIEGIIGRLCPGSGTA
YSVVCRAGGRQVPPQKCLYGLNPLQEGNMDPKGIKQLFQE

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_8|303_bp
atggtgcctgaagaagagcctcaagaccgagtgcctcacaattttatgtatagcaaaact
gtcaagaggctgtccaagttacgagagtatcaacagtatcatccaagcctgacctgcgtc
atggaaggaaaggacatagaagggataattggtcggctgtgtccaggatcagggactgcc
tacagcgtcgtatgcagagccggagggagacaagttccaccccagaaatgcctctatggc
cttaatcctttgcaggaaggaaatatggacccaaagggcatcaaacaattatttcaagaa
tga

>gi568815586r:7589881_7795728|GENSCAN_predicted_peptide_9|391_aa
MPWDQDPEQSTGNYSEDEQNGKQKWREEGEAGRKREREKEEKNEKELQDEQENKRKRENE
KQKQYPEKRLVSKSLMHTLWAKFKLNRCPTIQESLSLSFEFDMTHKQTQWDRERGMGEFS
SGFYAKTPFCKEQSFWYLPFGELRASSASDSPDSSTSPKGKQPTSAEKSVAKKEDKVPVK
KQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSKRWQ
KNNWPKNSNGVTQKASAPTYPSLYSSYHQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQ
SWSNHSWNTQTWCTQSWNNQAWNSPFYNCGEESLQSCMQFQPNSPASDLEAALEAAGEGL
NVIQQTTRYFSTPQTMDLFLNYSMNMQPEDV

>gi568815586r:7589881_7795728|GENSCAN_predicted_CDS_9|1176_bp
atgccttgggatcaagatccagaacaatcaactggaaattacagtgaagatgaacaaaat
ggaaagcagaaatggagagaagaaggagaagcaggcagaaagagagaacgagaaaaagaa
gaaaaaaacgaaaaggagctgcaagatgaacaggaaaacaaaaggaaaagggaaaatgag
aaacagaaacagtatcccgagaaaagattagtcagcaaatccctcatgcatactctctgg
gcaaagtttaagttaaacaggtgccccactatacaagagagtctatcactgtcatttgaa
tttgacatgacacataaacagacacaatgggacagggagcgggggatgggggaattcagc
tcaggcttttatgcaaagacccccttctgcaaagaacaaagcttctggtacctgcccttt
ggagagctgcgggcaagctcagcctcggacagccctgattcttccaccagtcccaaaggc
aaacaacccacttctgcagagaagagtgtcgcaaaaaaggaagacaaggtcccggtcaag
aaacagaagaccagaactgtgttctcttccacccagctgtgtgtactcaatgatagattt
cagagacagaaatacctcagcctccagcagatgcaagaactctccaacatcctgaacctc
agctacaaacaggtgaagacctggttccagaaccagagaatgaaatctaagaggtggcag
aaaaacaactggccgaagaatagcaatggtgtgacgcagaaggcctcagcacctacctac
cccagcctttactcttcctaccaccagggatgcctggtgaacccgactgggaaccttcca
atgtggagcaaccagacctggaacaattcaacctggagcaaccagacccagaacatccag
tcctggagcaaccactcctggaacactcagacctggtgcacccaatcctggaacaatcag
gcctggaacagtcccttctataactgtggagaggaatctctgcagtcctgcatgcagttc
cagccaaattctcctgccagtgacttggaggctgccttggaagctgctggggaaggcctt
aatgtaatacagcagaccactaggtattttagtactccacaaaccatggatttattccta
aactactccatgaacatgcaacctgaagacgtgtga