Result of FASTA (omim) for pF1KB4538
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4538, 397 aa
  1>>>pF1KB4538 397 - 397 aa - 397 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0679+/-0.000393; mu= 17.9382+/- 0.025
 mean_var=67.0824+/-13.635, 0's: 0 Z-trim(111.9): 73  B-trim: 47 in 1/50
 Lambda= 0.156592
 statistics sampled from 20537 (20610) to 20537 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.242), width:  16
 Scan time:  8.230

The best scores are:                                      opt bits E(85289)
NP_001306004 (OMIM: 605581) N-acetyllactosaminide  ( 397) 2707 620.8 1.8e-177
NP_006568 (OMIM: 605581) N-acetyllactosaminide bet ( 397) 2707 620.8 1.8e-177
XP_005247010 (OMIM: 615313) PREDICTED: UDP-GlcNAc: ( 328)  877 207.3 4.3e-53
NP_660279 (OMIM: 615313) UDP-GlcNAc:betaGal beta-1 ( 401)  877 207.4 5.1e-53
NP_001317421 (OMIM: 605864) N-acetyllactosaminide  ( 353)  853 201.9   2e-51
NP_110392 (OMIM: 605864) N-acetyllactosaminide bet ( 378)  853 201.9 2.1e-51
NP_619651 (OMIM: 615315) acetylgalactosaminyl-O-gl ( 384)  832 197.2 5.7e-50
NP_055071 (OMIM: 605863) N-acetyllactosaminide bet ( 372)  799 189.7 9.7e-48
XP_011525928 (OMIM: 605863) PREDICTED: N-acetyllac ( 372)  799 189.7 9.7e-48
NP_940942 (OMIM: 615357) UDP-GlcNAc:betaGal beta-1 ( 397)  728 173.7 6.9e-43
XP_011525236 (OMIM: 615357) PREDICTED: UDP-GlcNAc: ( 397)  728 173.7 6.9e-43
XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326)  643 154.4 3.5e-37
NP_066191 (OMIM: 603093) beta-1,3-galactosyltransf ( 326)  643 154.4 3.5e-37
XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326)  643 154.4 3.5e-37
XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326)  643 154.4 3.5e-37
NP_003774 (OMIM: 603018) beta-1,3-galactosyltransf ( 422)  580 140.3 8.4e-33
XP_011511527 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_011511531 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_005247882 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_011511528 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_011511529 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_011511530 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_005247881 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_005247880 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
XP_016862798 (OMIM: 615333) PREDICTED: lactosylcer ( 378)  557 135.1 2.8e-31
NP_114436 (OMIM: 615333) lactosylceramide 1,3-N-ac ( 378)  557 135.1 2.8e-31
XP_016883729 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883718 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883723 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883730 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883721 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883722 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883716 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883727 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883724 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
NP_149360 (OMIM: 604066) beta-1,3-galactosyltransf ( 310)  483 118.3 2.6e-26
NP_006048 (OMIM: 604066) beta-1,3-galactosyltransf ( 310)  483 118.3 2.6e-26
XP_016883720 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
NP_001265579 (OMIM: 604066) beta-1,3-galactosyltra ( 310)  483 118.3 2.6e-26
XP_016883728 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883726 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883717 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
NP_149361 (OMIM: 604066) beta-1,3-galactosyltransf ( 310)  483 118.3 2.6e-26
XP_016883725 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
XP_016883719 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310)  483 118.3 2.6e-26
NP_149362 (OMIM: 604066) beta-1,3-galactosyltransf ( 314)  483 118.3 2.6e-26
XP_005247918 (OMIM: 111400,603094,615021) PREDICTE ( 331)  438 108.1 3.1e-23
NP_149357 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331)  438 108.1 3.1e-23
XP_006713866 (OMIM: 111400,603094,615021) PREDICTE ( 331)  438 108.1 3.1e-23
NP_001033717 (OMIM: 111400,603094,615021) UDP-GalN ( 331)  438 108.1 3.1e-23


>>NP_001306004 (OMIM: 605581) N-acetyllactosaminide beta  (397 aa)
 initn: 2707 init1: 2707 opt: 2707  Z-score: 3307.2  bits: 620.8 E(85289): 1.8e-177
Smith-Waterman score: 2707; 100.0% identity (100.0% similar) in 397 aa overlap (1-397:1-397)

               10        20        30        40        50        60
pF1KB4 MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 REQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 LYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 LLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 VFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLY
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
              310       320       330       340       350       360

              370       380       390       
pF1KB4 KNKNNICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC
       :::::::::::::::::::::::::::::::::::::
NP_001 KNKNNICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC
              370       380       390       

>>NP_006568 (OMIM: 605581) N-acetyllactosaminide beta-1,  (397 aa)
 initn: 2707 init1: 2707 opt: 2707  Z-score: 3307.2  bits: 620.8 E(85289): 1.8e-177
Smith-Waterman score: 2707; 100.0% identity (100.0% similar) in 397 aa overlap (1-397:1-397)

               10        20        30        40        50        60
pF1KB4 MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 REQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 REQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 LYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 LLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 VFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLY
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
              310       320       330       340       350       360

              370       380       390       
pF1KB4 KNKNNICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC
       :::::::::::::::::::::::::::::::::::::
NP_006 KNKNNICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC
              370       380       390       

>>XP_005247010 (OMIM: 615313) PREDICTED: UDP-GlcNAc:beta  (328 aa)
 initn: 669 init1: 294 opt: 877  Z-score: 1074.1  bits: 207.3 E(85289): 4.3e-53
Smith-Waterman score: 877; 43.3% identity (73.5% similar) in 298 aa overlap (109-397:28-321)

       80        90       100       110       120       130        
pF1KB4 NQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFLLYLRCRNYSLLIDQPDKC
                                     :. :  .:..::.: .:: . .:...:.::
XP_005    MASQGPQAWDVTTTNCSANINLTHQPWFQVLEPQFRQFLFYRHCRYFPMLLNHPEKC
                  10        20        30        40        50       

      140       150       160         170        180       190     
pF1KB4 AKKPFLLLAIKSLTPHFARRQAIRESWGQE--SNAGNQTVVR-VFLLGQTPPEDNHPDLS
           .::...::.  .  ::.:::..::.:  : .:.. .:: .:::: .  ....   .
XP_005 RGDVYLLVVVKSVITQHDRREAIRQTWGRERQSAGGGRGAVRTLFLLGTASKQEERTHYQ
        60        70        80        90       100       110       

         200       210       220       230       240       250     
pF1KB4 DMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHI
       ..: .:.. . :::.:.. ::::::.:::. ::.:..  :: . :.::::::::::  ..
XP_005 QLLAYEDRLYGDILQWGFLDTFFNLTLKEIHFLKWLDIYCPHVPFIFKGDDDVFVNPTNL
       120       130       140       150       160       170       

         260       270       280       290        300       310    
pF1KB4 LNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYS-GLYPPYAGGGGFLYSGH
       :..: .  .   ..::.:::...: : : :  ::::: ..:. . :::::::::::..: 
XP_005 LEFLAD--RQPQENLFVGDVLQHARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAGS
       180         190       200       210       220       230     

          320       330       340       350       360              
pF1KB4 LALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEEKNKNN-----ICSY
       :: ::.:  : ..:::::::. ::::. ::. :  :.::.:: :  .:.:.      : .
XP_005 LARRLHHACDTLELYPIDDVFLGMCLEVLGVQPTAHEGFKTFGIS-RNRNSRMNKEPCFF
         240       250       260       270       280        290    

     370       380       390              
pF1KB4 VDLMLVHSRKPQEMIDIWSQLQSAHLKC       
         ...::.  : :.. .:. ..: .: :       
XP_005 RAMLVVHKLLPPELLAMWGLVHS-NLTCSRKLQVL
          300       310        320        

>>NP_660279 (OMIM: 615313) UDP-GlcNAc:betaGal beta-1,3-N  (401 aa)
 initn: 669 init1: 294 opt: 877  Z-score: 1072.9  bits: 207.4 E(85289): 5.1e-53
Smith-Waterman score: 878; 37.8% identity (67.9% similar) in 368 aa overlap (47-397:33-394)

         20        30        40        50        60        70      
pF1KB4 ANVFIYFIMEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWNREQEKLNRQYNPI---
                                     .: .   ::    .. :.  ..  ::    
NP_660 LWKKTVYRSLCLALALLVAVTVFQRSLTPGQFLQEPPPPTLEPQKAQKPNGQLVNPNNFW
             10        20        30        40        50        60  

                 80        90       100       110       120        
pF1KB4 -----LSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFLLYLRCRNY
            ..  : ..... .  ...  : :  .. .:     :. :  .:..::.: .:: .
NP_660 KNPKDVAAPTPMASQGPQAWDVTTTN-CSANINLTHQ-PWFQVLEPQFRQFLFYRHCRYF
             70        80         90        100       110       120

      130       140       150       160         170        180     
pF1KB4 SLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQE--SNAGNQTVVR-VFLLGQT
        .:...:.::    .::...::.  .  ::.:::..::.:  : .:.. .:: .:::: .
NP_660 PMLLNHPEKCRGDVYLLVVVKSVITQHDRREAIRQTWGRERQSAGGGRGAVRTLFLLGTA
              130       140       150       160       170       180

         190       200       210       220       230       240     
pF1KB4 PPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGD
         ....   ...: .:.. . :::.:.. ::::::.:::. ::.:..  :: . :.::::
NP_660 SKQEERTHYQQLLAYEDRLYGDILQWGFLDTFFNLTLKEIHFLKWLDIYCPHVPFIFKGD
              190       200       210       220       230       240

         250       260       270       280       290        300    
pF1KB4 DDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYS-GLYPPYA
       ::::::  ..:..:   ..   ..::.:::...: : : :  ::::: ..:. . :::::
NP_660 DDVFVNPTNLLEFLA--DRQPQENLFVGDVLQHARPIRRKDNKYYIPGALYGKASYPPYA
              250         260       270       280       290        

          310       320       330       340       350       360    
pF1KB4 GGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEEKNKN
       ::::::..: :: ::.:  : ..:::::::. ::::. ::. :  :.::.:: :  .:.:
NP_660 GGGGFLMAGSLARRLHHACDTLELYPIDDVFLGMCLEVLGVQPTAHEGFKTFGIS-RNRN
      300       310       320       330       340       350        

               370       380       390              
pF1KB4 N-----ICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC       
       .      : .  ...::.  : :.. .:. ..: .: :       
NP_660 SRMNKEPCFFRAMLVVHKLLPPELLAMWGLVHS-NLTCSRKLQVL
       360       370       380       390        400 

>>NP_001317421 (OMIM: 605864) N-acetyllactosaminide beta  (353 aa)
 initn: 759 init1: 244 opt: 853  Z-score: 1044.3  bits: 201.9 E(85289): 2e-51
Smith-Waterman score: 853; 43.5% identity (72.1% similar) in 308 aa overlap (96-397:51-345)

          70        80        90       100       110       120     
pF1KB4 LNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFLLYLRC
                                     : :.  :.:.     .::.: . :: : .:
NP_001 LLFLRKAAKPAGDPTAHQPFWAPPTPRHSRCPPNHTVSSASL---SLPSRHRLFLTYRHC
               30        40        50        60           70       

         130       140       150       160       170        180    
pF1KB4 RNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESN-AGNQTVVRVFLLG-
       ::.:.:.. :. :.:  ::::::::   :  :: ::: .::. .. : .. .  ::::: 
NP_001 RNFSILLE-PSGCSKDTFLLLAIKSQPGHVERRAAIRSTWGRVGGWARGRQLKLVFLLGV
        80         90       100       110       120       130      

             190       200       210       220       230       240 
pF1KB4 --QTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFV
         ..::       ...: .::.. .:::.:.. . ::::.:::. . ::: ..::...:.
NP_001 AGSAPP-------AQLLAYESREFDDILQWDFTEDFFNLTLKELHLQRWVVAACPQAHFM
        140              150       160       170       180         

             250       260       270       280       290        300
pF1KB4 FKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGL-Y
       .::::::::.. ..:..:.. .   :.::..::::..: :.:. :.::.::  .: .  :
NP_001 LKGDDDVFVHVPNVLEFLDGWDP--AQDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHY
     190       200       210         220       230       240       

              310       320       330       340       350       360
pF1KB4 PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
       ::::::::...:   . ::  : ....:.:::::..::::..::: : .: ::.:: :..
NP_001 PPYAGGGGYVMSRATVRRLQAIMEDAELFPIDDVFVGMCLRRLGLSPMHHAGFKTFGIRR
       250       260       270       280       290       300       

               370       380       390               
pF1KB4 K-NKNNICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC        
         .  . : :  :.:::  .: ::  .:. . .  :::        
NP_001 PLDPLDPCLYRGLLLVHRLSPLEMWTMWALVTDEGLKCAAGPIPQR
       310       320       330       340       350   

>>NP_110392 (OMIM: 605864) N-acetyllactosaminide beta-1,  (378 aa)
 initn: 759 init1: 244 opt: 853  Z-score: 1043.9  bits: 201.9 E(85289): 2.1e-51
Smith-Waterman score: 853; 43.5% identity (72.1% similar) in 308 aa overlap (96-397:76-370)

          70        80        90       100       110       120     
pF1KB4 LNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFLLYLRC
                                     : :.  :.:.     .::.: . :: : .:
NP_110 LLFLRKAAKPAGDPTAHQPFWAPPTPRHSRCPPNHTVSSASL---SLPSRHRLFLTYRHC
          50        60        70        80           90       100  

         130       140       150       160       170        180    
pF1KB4 RNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESN-AGNQTVVRVFLLG-
       ::.:.:.. :. :.:  ::::::::   :  :: ::: .::. .. : .. .  ::::: 
NP_110 RNFSILLE-PSGCSKDTFLLLAIKSQPGHVERRAAIRSTWGRVGGWARGRQLKLVFLLGV
            110        120       130       140       150       160 

             190       200       210       220       230       240 
pF1KB4 --QTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFV
         ..::       ...: .::.. .:::.:.. . ::::.:::. . ::: ..::...:.
NP_110 AGSAPP-------AQLLAYESREFDDILQWDFTEDFFNLTLKELHLQRWVVAACPQAHFM
                    170       180       190       200       210    

             250       260       270       280       290        300
pF1KB4 FKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGL-Y
       .::::::::.. ..:..:.. .   :.::..::::..: :.:. :.::.::  .: .  :
NP_110 LKGDDDVFVHVPNVLEFLDGWDP--AQDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHY
          220       230         240       250       260       270  

              310       320       330       340       350       360
pF1KB4 PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
       ::::::::...:   . ::  : ....:.:::::..::::..::: : .: ::.:: :..
NP_110 PPYAGGGGYVMSRATVRRLQAIMEDAELFPIDDVFVGMCLRRLGLSPMHHAGFKTFGIRR
            280       290       300       310       320       330  

               370       380       390               
pF1KB4 K-NKNNICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC        
         .  . : :  :.:::  .: ::  .:. . .  :::        
NP_110 PLDPLDPCLYRGLLLVHRLSPLEMWTMWALVTDEGLKCAAGPIPQR
            340       350       360       370        

>>NP_619651 (OMIM: 615315) acetylgalactosaminyl-O-glycos  (384 aa)
 initn: 756 init1: 227 opt: 832  Z-score: 1018.2  bits: 197.2 E(85289): 5.7e-50
Smith-Waterman score: 832; 41.3% identity (70.8% similar) in 298 aa overlap (109-397:82-377)

       80        90       100       110       120       130        
pF1KB4 NQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFLLYLRCRNYSLLIDQPDKC
                                     :..:: :..::: : .::.. :: : : ::
NP_619 TDAPAADEPPSELVPGPPCVANASANATADFEQLPARIQDFLRYRHCRHFPLLWDAPAKC
              60        70        80        90       100       110 

        140       150       160       170       180       190      
pF1KB4 A--KKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVFLLGQTPPEDNH--PDL
       :  .  :::::.::   :. ::. ::..:::: . :.. : :.::::   :::.     :
NP_619 AGGRGVFLLLAVKSAPEHYERRELIRRTWGQERSYGGRPVRRLFLLGTPGPEDEARAERL
             120       130       140       150       160       170 

          200       210       220       230       240       250    
pF1KB4 SDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHH
       .... .:...: :.:.: . :::.::.::.. .: :... :: ..:...:::::::.: .
NP_619 AELVALEAREHGDVLQWAFADTFLNLTLKHLHLLDWLAARCPHARFLLSGDDDVFVHTAN
             180       190       200       210       220       230 

          260       270       280       290        300       310   
pF1KB4 ILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSG-LYPPYAGGGGFLYSG
       .. .:..  .  .. :: :...... : ::.  ::..:  .. :  :: : .::::: ::
NP_619 VVRFLQA--QPPGRHLFSGQLMEGSVPIRDSWSKYFVPPQLFPGSAYPVYCSGGGFLLSG
               240       250       260       270       280         

           320       330       340       350           360         
pF1KB4 HLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIE----EKNKNNICSY
         :  :   . .. :.::::.: ::::.. ::.:  :.:.: : ..    .... . : :
NP_619 PTARALRAAARHTPLFPIDDAYMGMCLERAGLAPSGHEGIRPFGVQLPGAQQSSFDPCMY
     290       300       310       320       330       340         

     370       380       390              
pF1KB4 VDLMLVHSRKPQEMIDIWSQLQSAHLKC       
        .:.:::   : ::. .:. :.:  :.:       
NP_619 RELLLVHRFAPYEMLLMWKALHSPALSCDRGHRVS
     350       360       370       380    

>>NP_055071 (OMIM: 605863) N-acetyllactosaminide beta-1,  (372 aa)
 initn: 739 init1: 372 opt: 799  Z-score: 978.1  bits: 189.7 E(85289): 9.7e-48
Smith-Waterman score: 799; 41.3% identity (70.0% similar) in 303 aa overlap (103-397:65-365)

             80        90       100         110       120       130
pF1KB4 ILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVT--GFNNLPDRFKDFLLYLRCRNYSL
                                     ::.::   : . :.. ..:::: .::.. :
NP_055 KVQEQPPAIPEALAWPTPPTRPAPAPCHANTSMVTHPDFATQPQHVQNFLLYRHCRHFPL
           40        50        60        70        80        90    

               140       150       160       170       180         
pF1KB4 LID-QPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVFLLGQTPPED
       : :  :.:::.  ::::.:::   ...::. .:..::.: .. .  .  .::.: .    
NP_055 LQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRRTWGRERKVRGLQLRLLFLVGTASNPH
          100       110       120       130       140       150    

     190       200       210       220       230       240         
pF1KB4 NHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVF
       .   .. .:..:.. : :::.:...:.::::.::.::::.:  : : .. ::..::::::
NP_055 EARKVNRLLELEAQTHGDILQWDFHDSFFNLTLKQVLFLQWQETRCANASFVLNGDDDVF
          160       170       180       190       200       210    

     250       260       270       280       290        300        
pF1KB4 VNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGL-YPPYAGGGG
       ..: ... ::.  ..  .. ::.:..:.:.:: :    :::.:::: ..  :::: ::::
NP_055 AHTDNMVFYLQ--DHDPGRHLFVGQLIQNVGPIRAFWSKYYVPEVVTQNERYPPYCGGGG
          220         230       240       250       260       270  

      310       320       330       340       350       360        
pF1KB4 FLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEEKNKN----
       :: :   :  : . .  . ..:::::. ::::.  :: : .:.:.::  ..  ..     
NP_055 FLLSRFTAAALRRAAHVLDIFPIDDVFLGMCLELEGLKPASHSGIRTSGVRAPSQRLSSF
            280       290       300       310       320       330  

          370       380       390              
pF1KB4 NICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC       
       . : : ::.:::   : ::. .:. :.. .: :       
NP_055 DPCFYRDLLLVHRFLPYEMLLMWDALNQPNLTCGNQTQIY
            340       350       360       370  

>>XP_011525928 (OMIM: 605863) PREDICTED: N-acetyllactosa  (372 aa)
 initn: 739 init1: 372 opt: 799  Z-score: 978.1  bits: 189.7 E(85289): 9.7e-48
Smith-Waterman score: 799; 41.3% identity (70.0% similar) in 303 aa overlap (103-397:65-365)

             80        90       100         110       120       130
pF1KB4 ILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVT--GFNNLPDRFKDFLLYLRCRNYSL
                                     ::.::   : . :.. ..:::: .::.. :
XP_011 KVQEQPPAIPEALAWPTPPTRPAPAPCHANTSMVTHPDFATQPQHVQNFLLYRHCRHFPL
           40        50        60        70        80        90    

               140       150       160       170       180         
pF1KB4 LID-QPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVFLLGQTPPED
       : :  :.:::.  ::::.:::   ...::. .:..::.: .. .  .  .::.: .    
XP_011 LQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRRTWGRERKVRGLQLRLLFLVGTASNPH
          100       110       120       130       140       150    

     190       200       210       220       230       240         
pF1KB4 NHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVF
       .   .. .:..:.. : :::.:...:.::::.::.::::.:  : : .. ::..::::::
XP_011 EARKVNRLLELEAQTHGDILQWDFHDSFFNLTLKQVLFLQWQETRCANASFVLNGDDDVF
          160       170       180       190       200       210    

     250       260       270       280       290        300        
pF1KB4 VNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGL-YPPYAGGGG
       ..: ... ::.  ..  .. ::.:..:.:.:: :    :::.:::: ..  :::: ::::
XP_011 AHTDNMVFYLQ--DHDPGRHLFVGQLIQNVGPIRAFWSKYYVPEVVTQNERYPPYCGGGG
          220         230       240       250       260       270  

      310       320       330       340       350       360        
pF1KB4 FLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEEKNKN----
       :: :   :  : . .  . ..:::::. ::::.  :: : .:.:.::  ..  ..     
XP_011 FLLSRFTAAALRRAAHVLDIFPIDDVFLGMCLELEGLKPASHSGIRTSGVRAPSQRLSSF
            280       290       300       310       320       330  

          370       380       390              
pF1KB4 NICSYVDLMLVHSRKPQEMIDIWSQLQSAHLKC       
       . : : ::.:::   : ::. .:. :.. .: :       
XP_011 DPCFYRDLLLVHRFLPYEMLLMWDALNQPNLTCGNQTQIY
            340       350       360       370  

>>NP_940942 (OMIM: 615357) UDP-GlcNAc:betaGal beta-1,3-N  (397 aa)
 initn: 719 init1: 495 opt: 728  Z-score: 891.0  bits: 173.7 E(85289): 6.9e-43
Smith-Waterman score: 746; 34.5% identity (65.8% similar) in 351 aa overlap (55-397:69-397)

           30        40        50        60        70        80    
pF1KB4 MEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWNREQEKLNRQYNPILSMLTNQTGEA
                                     : ::::..: .:.       :. .... :.
NP_940 RGTPPSPTPANPEPTLPANLSTRLGQTIPLPFAYWNQQQWRLG-------SLPSGDSTET
       40        50        60        70        80               90 

           90        100       110       120       130             
pF1KB4 GRLSNISHLNYCEP-DLRVTSVVTGFNNLPDRFKDFLLYLRCRNYSLLI-----DQPDKC
       :          :.     ... .  : . :  .. :::   ::..   .     .: ..:
NP_940 GG---------CQAWGAAAATEIPDFASYPKDLRRFLLSAACRSFPQWLPGGGGSQVSSC
                      100       110       120       130       140  

      140         150       160       170       180       190      
pF1KB4 AKK--PFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVFLLGQTPPEDNHPDLSD
       .    :.::::.::   .::.:::.::.::. . .    .  .:::: .:  .  :::..
NP_940 SDTDVPYLLLAVKSEPGRFAERQAVRETWGSPAPG----IRLLFLLG-SPVGEAGPDLDS
            150       160       170           180        190       

        200       210       220       230       240       250      
pF1KB4 MLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHIL
       .. .::....:.:.:.. :. :: .::..:.: :..  :: . ::....::.::.:  .:
NP_940 LVAWESRRYSDLLLWDFLDVPFNQTLKDLLLLAWLGRHCPTVSFVLRAQDDAFVHTPALL
       200       210       220       230       240       250       

        260       270       280       290       300       310      
pF1KB4 NYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLYPPYAGGGGFLYSGHLA
        .: .:  ..:..:..:.:. .: : :     .:.::  . : :: ::.:::.. .:.::
NP_940 AHLRALPPASARSLYLGEVFTQAMPLRKPGGPFYVPESFFEGGYPAYASGGGYVIAGRLA
       260       270       280       290       300       310       

        320       330       340       350       360       370      
pF1KB4 LRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEEKNKNNICSYVDLMLVH
         : . . .:  .:..:::::.:.. :::::. : :: :    ... .. :.. .:.::.
NP_940 PWLLRAAARVAPFPFEDVYTGLCIRALGLVPQAHPGFLTAWPADRTADH-CAFRNLLLVR
       320       330       340       350       360        370      

        380       390       
pF1KB4 SRKPQEMIDIWSQLQSAHLKC
          ::  : .:.:::. .:.:
NP_940 PLGPQASIRLWKQLQDPRLQC
        380       390       




397 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 05:54:12 2016 done: Sat Nov  5 05:54:13 2016
 Total Scan time:  8.230 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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