GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:30:25

Sequence gi568815591r:117178158_117422989 : 244832 bp : 39.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   3317   3356   40                              -2.25
 1.01 Init +   6456   6542   87  2  0   65   62    66 0.427   2.39
 1.02 Intr +  12174  12271   98  2  2   49   35   146 0.439   3.29
 1.03 Intr +  12677  12779  103  2  1   87   87    42 0.591   3.26
 1.04 Intr +  31630  31780  151  0  1   76   92    32 0.041   1.21
 1.05 Intr +  32037  32221  185  1  2    9   70   175 0.042   6.39
 1.06 Intr +  38093  38114   22  1  1   74   97    13 0.437  -3.00
 1.07 Intr +  40927  41019   93  2  0  114  103   118 0.928  14.92
 1.08 Term +  46653  46903  251  1  2   89   39   214 0.670  11.48
 1.09 PlyA +  47124  47129    6                               1.05

 2.04 PlyA -  48479  48474    6                               1.05
 2.03 Term -  48813  48721   93  0  0   67   39   121 0.226   1.95
 2.02 Intr -  50513  50383  131  0  2   42   92    47 0.109  -0.01
 2.01 Init -  52153  52015  139  1  1   72   94    63 0.270   5.66
 2.00 Prom -  55209  55170   40                              -5.05

 3.05 PlyA -  56823  56818    6                               1.05
 3.04 Term -  60709  60257  453  1  0   43   42   251 0.211  10.17
 3.03 Intr -  62763  62676   88  2  1  119   91    15 0.240   3.95
 3.02 Intr -  75830  75719  112  0  1   53   61   116 0.283   3.92
 3.01 Init -  79081  78961  121  1  1   46   92    39 0.400   0.50
 3.00 Prom -  79468  79429   40                              -3.45

 4.04 PlyA -  79888  79883    6                               1.05
 4.03 Term -  85032  84790  243  0  0   14   43   226 0.993   5.62
 4.02 Intr -  85238  85050  189  2  0   89   87   107 0.857   9.56
 4.01 Init -  86568  86527   42  0  0  117   36    44 0.599   2.57
 4.00 Prom -  89915  89876   40                              -6.95

 5.00 Prom +  91729  91768   40                              -5.25
 5.01 Init +  96325  96381   57  0  0   79   81    46 0.044   4.36
 5.02 Intr + 100055 100260  206  1  2   33   47   153 0.039   2.78
 5.03 Term + 101800 102073  274  1  1  106   43    97 0.029   0.96
 5.04 PlyA + 102269 102274    6                               1.05

 6.00 Prom + 102827 102866   40                              -6.95
 6.01 Init + 103703 103772   70  1  1   42   71   113 0.787   6.26
 6.02 Intr + 104171 104490  320  0  2  -11   65   222 0.402   4.75
 6.03 Term + 105452 105550   99  1  0  123   47    83 0.937   4.85
 6.04 PlyA + 106088 106093    6                               1.05

 7.15 PlyA - 106302 106297    6                              -0.45
 7.14 Term - 106999 106701  299  2  2   84   33   219 0.992  10.44
 7.13 Intr - 119719 119455  265  1  1  109  111   266 0.720  27.16
 7.12 Intr - 122912 122688  225  2  0   -4   63   190 0.006   4.56
 7.11 Intr - 137191 136914  278  2  2   53   86   289 0.382  21.51
 7.10 Intr - 142636 142410  227  0  2  118  100   201 0.658  21.01
 7.09 Intr - 144766 144599  168  0  0   48   89   136 0.903   7.84
 7.08 Intr - 145754 145290  465  1  0  104   -2   249 0.626   8.81
 7.07 Intr - 169519 169368  152  1  2  -25   76   127 0.000  -1.76
 7.06 Intr - 189281 189195   87  2  0   68   71    82 0.268   3.75
 7.05 Intr - 190560 190455  106  2  1   80   61    51 0.752   0.90
 7.04 Intr - 201890 201781  110  2  2   47   98   120 0.837   7.06
 7.03 Intr - 207652 207541  112  0  1  110   37   144 0.995  10.96
 7.02 Intr - 208475 208333  143  2  2   57   57    96 0.363   1.63
 7.01 Init - 227007 226918   90  0  0   80   93    99 0.820  10.14
 7.00 Prom - 236810 236771   40                              -4.95

 8.03 PlyA - 237354 237349    6                               1.05
 8.02 Term - 242117 242002  116  0  2   74   48    29 0.266  -4.75
 8.01 Intr - 244202 244080  123  0  0   49   90   163 0.945  12.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_1|329_aa
MFEEGQGGYKYKGVAPGSSSVVMEQIYILFGHAHTLCRNGPKQARLLLKLQRFNLHRSTD
IGFSPEAASRRGLSTAEMNAVEAIHRAVEFNPHVPKYLLEMKSLILPPEHILKRGDSEAI
AYAFFHLAHWKRVEGALNLLHCTWEGRAPCHPENPVWKLGQPHSIMVIFGIGLGFVLDTD
DHFLMAFVGGLAKSHSYPPLEPDRPSKKQIHNQNQAFRMIPYPLEKGHLFYPYPICTETA
DRELLPWTLLGKLNLRAATCSCMVCHHSCSGGSFSGISGFPGSTLESSKNLKVTEACPHN
RNFLGLGSAWATQLSSTPLVMRMYNQCIE

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_1|990_bp
atgtttgaggaaggacagggagggtacaaatataaaggggtagcaccagggagttcctct
gtggtaatggaacagatctatatcttgtttgggcatgcacacaccctctgccggaatggc
cccaagcaggctcgcctgctgctgaagctgcaacgatttaacctccatcgcagcactgac
attggattctctcctgaggctgcatctcggcgggggctgagcacagcagagatgaatgca
gtagaggccattcatagagctgtggaattcaatcctcatgtgccaaaatacctactagaa
atgaaaagcttaatcctacccccagaacatatcctgaagagaggagacagtgaagcaata
gcatatgcattctttcatcttgcacactggaagagagtggaaggggctttgaatcttttg
cattgtacgtgggaaggcagggcaccttgtcaccctgaaaaccctgtttggaaacttgga
cagccccacagcatcatggtgatctttggcattgggttaggcttcgtgctggacactgat
gaccacttcttgatggcctttgtgggagggttggctaagagccacagttatcctccactg
gaaccagaccggccatccaaaaagcaaattcacaaccaaaatcaagcttttcggatgatc
ccttatcccttggaaaaggggcacctattttatccttacccaatctgtacagaaacagca
gaccgagagctgcttccatggacactgcttggaaagctgaaccttcgagcagccacttgc
agctgcatggtgtgccatcacagctgttcaggtggaagcttttcaggaatcagtggtttc
cctggctctaccttggaatcatcgaaaaacttaaaagttactgaggcctgtccccacaac
cggaactttcttggtctggggtccgcatgggcaactcagttgtcaagcactcccctggtg
atgcggatgtacaaccagtgtattgaatag

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_2|120_aa
MVLLNPRDSIFQASAYKGFSGPAEMCSISTETMMWHSVDPGSQETQGKCSVDCGSSRRGM
VGKFPKFADPESVLLFHFVFGPVEHTLGRQQSTVVPSFLDDTCPSQQGSTRIRSPNASNV

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_2|363_bp
atggtcctgttgaacccaagagattccattttccaagcctctgcctataaggggttctca
gggcctgctgagatgtgttccatcagcacagaaaccatgatgtggcattcagtagatcca
ggttcccaggaaactcaaggtaaatgttctgtggactgtgggtcttcgagaagaggtatg
gtgggcaagtttcccaaatttgctgacccagaatctgtcctgttgtttcattttgttttt
ggaccagtagaacacacactgggaaggcagcaaagtactgtggtcccttctttcctggat
gacacctgcccttctcaacaaggttccacaagaatacgaagccccaatgcttccaacgta
tag

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_3|257_aa
MKIQNALLGCGCTGKQRSFLPWPPYLARCPHLPECGKQVLVTRAVQGCVSLTQGPRLGLR
ECDLILVASSAEPAFKRRCPWAVRRPQGLPGGPWPTFKPSTKGPSKQWDFGVWSSLSQRV
VEEKNRSSLEKLVAVGGGGLGGWPPLPRRPRVSRRQAGEVRGITGWSVGLQVASRPQKRQ
QGTHMGSLAWGARGSCGLSMLQKQKAEDFRDAVGLDDAMLSETPRIQVSEGTSALEVESI
LFRTHVTFPAGLRGWGS

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_3|774_bp
atgaaaatccaaaatgccctactaggctgtggctgtactggcaagcagagatcttttctc
ccctggcccccttatcttgcaagatgcccacaccttcctgaatgtggtaaacaagttctg
gttaccagggctgtgcagggctgtgtcagtctgacacagggaccacgtctaggactcagg
gagtgtgacctgatccttgtcgcctcctctgcagagcctgccttcaaaagaaggtgtcca
tgggcggttagaaggccccagggccttcctgggggtccatggcccacattcaaacccagc
accaaggggccttctaagcagtgggattttggagtttggagctctttatcccagagagtt
gtcgaggagaaaaacagaagcagcctggaaaagcttgtggctgtcggaggtggggggctg
gggggatggcccccactgccgagacggcccagggtgtccaggaggcaggctggagaggtg
agaggcataacggggtggtctgtgggcctgcaagtggcatccagacctcagaagaggcag
caggggacacacatggggagcctggcatggggggcccgggggtcctgtggcctgagcatg
ctgcagaagcagaaagctgaggacttcagggatgctgtgggcctggatgatgctatgctg
tcagagacacctaggatacaggtgtctgaaggcacatccgctctggaggtggagagcatc
ctgttcaggactcacgtgacattccctgctggcttgaggggatggggctcataa

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_4|157_aa
MVQADSVMNGSPHKIIHSSIGRLTEVKSLQTGAVMRRVFASVNFGDHKFMDKIVIRKQHT
MNGHNCEVGKSLAKQEIVKVVLKTSAVVVEVILEGMATLIMEEITMVVIALVAAMMVVDM
MPVGIVIMVLVMIEAILEVVEATVDNGNYNNLQILDP

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_4|474_bp
atggtgcaagcagattcagtcatgaatggaagtccacacaagataatacatagcagtata
ggaagattgactgaagtgaaatcattacagactggggcagtgatgaggagagtctttgct
tctgtaaactttggtgaccataagttcatggataagattgtcattcggaaacaacatact
atgaatggccataactgtgaagtagggaaatccctggctaagcaagagattgtcaaagtg
gttctgaaaacttcagcagtcgttgtggaggttattttagagggaatggcaactttaatt
atggaggaaattacaatggttgtgatagctttggtggcagccatgatggtggtggatatg
atgccagtggggatagttataatggtgttggtaatgatagaagcaattttggaggtggtg
gaagcgacagtggacaatggcaattacaataatcttcaaattctggacccataa

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_5|178_aa
MAQEVGAECRDREVTAGRKSFQAVLTAHGAAPVELTPTLGHPGDMGGVVASPTAHDFTAV
HAPGSQVAHTACCTQGAWKTSQGVLLKSPLCVGIIYRNVMLPCLFGMTREAARFKQGTGS
RRGEGGAAFGQNDWRRRAGRLAGELHEDRKDGKRPGSGWRVGQPGMAPSLHRAEEAWG

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_5|537_bp
atggctcaggaagtaggtgctgaatgtagggacagggaagtgacagcaggaagaaagagc
ttccaggcagtcctgacagcgcacggcgcagcaccagtggaacttacacccacacttggt
catccgggtgacatgggaggtgtcgtagcctctcccacagcacatgacttcacagctgtc
catgccccgggaagtcaggttgcacacacggcctgctgtacccagggagcctggaagaca
agccagggagtgttactgaaaagtccgctctgtgttggaattatctacagaaatgtcatg
ttgccctgcctgttcgggatgaccagggaagcagcaaggttcaagcagggcacggggtca
agaagaggagagggtggggcagcgtttggtcagaatgattggcggcggagagcaggaaga
ctggccggggaacttcatgaggacaggaaggatggcaaaaggccggggtcagggtggagg
gtgggtcagccagggatggctccgagcctgcatcgtgctgaagaagcatggggttag

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_6|162_aa
MRAVSVDDIDECGGGEDMGTVSVEEGGRGRGEGEGGERRGRGRRERGRGGGRQGGGREEE
EEKEEERKEEGEEEKEEKGRGGGREGESNGGMCQGQEMSKALQRVRSRKVFPVAGIQYSK
GRVSGDEAGVMQKTEPDCLNRRIAQCSDLNTIRTQREEQTKL

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_6|489_bp
atgagagcagtttcagtggatgacatagatgaatgtggtggaggagaggacatggggaca
gtgagtgtagaagaaggtggtagaggaagaggagaaggggagggaggagaaagaagggga
agaggaagaagggaaagaggaagaggaggaggaagacaaggaggaggaagagaagaggaa
gaggagaaagaggaggagaggaaggaggagggggaggaggagaaagaagaaaaaggaaga
ggaggaggaagagaaggagaaagcaatggtggcatgtgccaaggccaggaaatgagcaaa
gctctgcaacgtgtgaggagcaggaaagtgttccctgtggctggtatacagtactcaaag
gggagagtgtcaggagatgaggctggagtgatgcagaaaactgaaccagactgtctgaac
agaaggattgctcagtgtagtgacctcaacaccatcagaactcagagagaggagcagaca
aagctatga

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_7|908_aa
MESSSGKEEEDWDESIEVPILSACTLATTKFFVYKSDLEDDSGKLGSESQTSFKTDHDVM
FSPSRADKIWCPWNRPRRRLMTPIMYAARDGHTQVVALLVAHGAEVNTQDENGYTNGITS
KDQQKILAALKELQVEEIQFGELSEETKLEISGDEFLNFLLKLNKQCGHLITAVQNVITE
LPVNSQKNFTSVCEELVNNVEDLSEKVCKLKDLIQKANQHKTRALNETTITDPHRVHFTP
LLHPPEQVLYSLLKTDHVTGLFADIPRSGEELGVRKNCIFPGCFGRYCWVRSRGSWTLQV
PLPMGSVFKPSTKESKPTGHFAEAWPLPNLALHRRGSSKFTSASSSSQLQGEKRSNELRI
ISGFLYPMHSNLLIPWPPSSFPHIARSGTCLPADGLGNPERTLREPTDALWPGASLKVPV
FASTLHGGKSTRTGAGDFGDRNGDRIGHIDPSWLRSPAAAAVSDSGPNPGYCPLIAPWYM
RATGGSSRVMCDNVPGLVSSQRQLCHRHPDVMRAISQGVAEWTAECQHQFRQHRWNCNTL
DRDHSLFGRVLLRSSRESAFVYAISSAGVVFAITRACSQGEVKSCSCDPKKMGSAKDSKG
IFDWGGCSDNIDYGIKFARAFVDAKERKGKDARALMNLHNNRAGRKIPKALKKGGKFTNL
DHKKSGGRAGPKWAHRAAQQHPQNPDLHICQVCLQLAACRHCCPQVAERLLQKPASRDRD
KAVKRFLKQECKCHGVSGSCTLRTCWLAMADFRKTGDYLWRKYNGAIQVVMNQDGTGFTV
ANERFKKPTKNDLVYFENSPDYCIRDREAAYHELKKKALSPKSYMSGSLHVTHLIKELEE
STGKTLLHWSHNVIKQAAFWCLAGHQDWALGKGSECHDCQELELYSQASLLANLVLATSC
LCDLGQVT

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_7|2727_bp
atggagagctctagtgggaaggaggaagaggactgggatgagtccatagaggttcccata
ctgtctgcatgtacattggccaccaccaagttctttgtgtataaatcagatcttgaggac
gactcaggaaaattgggctcagagtctcagacctcctttaaaacagaccatgatgttatg
ttcagcccaagtagagctgataaaatctggtgtccttggaataggcccagaaggagactt
atgaccccaatcatgtatgctgctcgagatggtcacacccaggttgttgctctccttgtt
gctcatggagcagaagttaatacccaggatgagaatggttacactaatggaattaccagt
aaagaccagcagaaaattctggctgctcttaaagaactacaggtagaagagatacaattt
ggagagctatctgaagagacaaagttggaaatcagtggtgatgagttcctcaactttctt
ctcaaattaaataaacagtgtggccatttaataacagctgtacagaatgttattactgag
ttacctgtaaattctcaaaagaattttacttcagtttgtgaagaattggttaataatgtt
gaagatttgagtgaaaaggtctgcaaactaaaagacctaattcaaaaggccaaccaacac
aaaaccagggcactaaatgaaactacaatcacggaccctcacagagtccatttcactccc
ctgctacatccaccggagcaggtgttgtattcactgctgaagacagatcacgtcacagga
ctctttgcagacattcctcgctccggagaggagctgggtgtgcgtaaaaactgcatcttt
cctgggtgctttggcagatactgctgggttaggtcccgagggtcatggaccctccaagtt
cccctccctatgggctctgtatttaagcccagcaccaaggaatcaaagccaacaggtcat
ttcgcagaggcctggcccctccctaaccttgccctgcatagacgcggcagctccaaattt
acaagtgctagctcttcatcccagcttcagggagagaagcgaagcaatgagttgagaatc
atctctggattcttgtatcccatgcatagtaatctccttatcccctggcccccttcctcg
tttcctcacattgcacgctcagggacttgtttgccagcggatggcctcggcaatccggaa
cgcacgctccgagagcccacggatgctctttggcctggagcttccctaaaggttcctgta
ttcgcgtcaactcttcatggtggtaagtccacgcgcacgggcgcgggggattttggagat
cggaatggggaccgcattggccacatagacccttcctggctgcgttcccccgcggccgca
gcagtctcggattctggcccgaaccctggctactgccctcttatcgccccatggtacatg
agagctacaggtggctcctccagggtgatgtgcgataatgtgccaggcctggtgagcagc
cagcggcagctgtgtcaccgacatccagatgtgatgcgtgccattagccagggcgtggcc
gagtggacagcagaatgccagcaccagttccgccagcaccgctggaattgcaacaccctg
gacagggatcacagcctttttggcagggtcctactccgaagtagtcgggaatctgccttt
gtttatgccatctcctcagctggagttgtatttgccatcaccagggcctgtagccaagga
gaagtaaaatcctgttcctgtgatccaaagaagatgggaagcgccaaggacagcaaaggc
atttttgattggggtggctgcagtgataacattgactatgggatcaaatttgcccgcgca
tttgtggatgcaaaggaaaggaaaggaaaggatgccagagccctgatgaatcttcacaac
aacagagctggcaggaagatcccaaaggcactaaaaaaaggaggaaagtttactaacttg
gatcacaaaaagtctggcggtagggcaggtccaaagtgggctcatcgagcagctcaacag
catccccagaacccagatcttcacatctgtcaagtgtgcctgcagcttgctgcctgtcgg
cattgctgccctcaggttgcagagaggctgctgcagaaaccagcatctagagacagagac
aaggctgtaaagcggttcttgaaacaagagtgcaagtgccacggggtgagcggctcatgt
actctcaggacatgctggctggccatggccgacttcaggaaaacgggcgattatctctgg
aggaagtacaatggggccatccaggtggtcatgaaccaggatggcacaggtttcactgtg
gctaacgagaggtttaagaagccaacgaaaaatgacctcgtgtattttgagaattctcca
gactactgtatcagggaccgagaggcagcatatcatgagctgaagaaaaaggccctctcc
ccaaaaagttacatgtcaggatctttgcacgttactcatttgataaaagaattagaagag
agtacgggaaagacgctgctgcactggtcacataatgttataaagcaggctgctttctgg
tgcctggccgggcaccaggactgggcactcggcaaagggtcagaatgtcacgactgtcaa
gagcttgagctctacagtcaggcaagcctgcttgcaaatcttgtccttgccaccagctgc
ctgtgtgatcttgggcaagttacttaa

>gi568815591r:117178158_117422989|GENSCAN_predicted_peptide_8|79_aa
XISVDSNFQYGWTPLMYAASVANAELVRVLLDRGANASFEKDKQSILITACSAHGSEEQI
LKCVELLLSRNADPNVACR

>gi568815591r:117178158_117422989|GENSCAN_predicted_CDS_8|240_bp
ngcattagtgtagattccaactttcagtatggatggactccccttatgtatgctgctagt
gttgccaatgcagagctggttcgggtccttttggacagaggtgctaatgcaagctttgag
aaggataagcaaagtattttgataactgcatgttctgctcatggctcagaggaacagatc
ttgaagtgtgtagaactactactttcaagaaatgctgatccaaatgttgcttgtaggtaa