Result of FASTA (omim) for pF1KE1355
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1355, 282 aa
  1>>>pF1KE1355 282 - 282 aa - 282 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7601+/-0.000395; mu= 17.9293+/- 0.025
 mean_var=55.4176+/-11.203, 0's: 0 Z-trim(110.9): 38  B-trim: 1127 in 1/50
 Lambda= 0.172286
 statistics sampled from 19366 (19403) to 19366 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.227), width:  16
 Scan time:  6.840

The best scores are:                                      opt bits E(85289)
XP_016878488 (OMIM: 125505,152700) PREDICTED: deox ( 282) 1875 474.2 1.2e-133
NP_005214 (OMIM: 125505,152700) deoxyribonuclease- ( 282) 1875 474.2 1.2e-133
XP_011520695 (OMIM: 125505,152700) PREDICTED: deox ( 282) 1875 474.2 1.2e-133
XP_005255205 (OMIM: 125505,152700) PREDICTED: deox ( 276) 1778 450.0 2.2e-126
XP_016878486 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_016878485 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_016878483 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_016878484 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_016878482 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_016878487 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_016878481 (OMIM: 125505,152700) PREDICTED: deox ( 304) 1778 450.1 2.4e-126
XP_006720917 (OMIM: 125505,152700) PREDICTED: deox ( 213) 1407 357.8   1e-98
XP_016878491 (OMIM: 125505,152700) PREDICTED: deox ( 235) 1310 333.7   2e-91
XP_016878490 (OMIM: 125505,152700) PREDICTED: deox ( 235) 1310 333.7   2e-91
XP_016878496 (OMIM: 125505,152700) PREDICTED: deox ( 184)  942 242.1 5.7e-64
NP_004935 (OMIM: 602244,614420) deoxyribonuclease  ( 305)  795 205.7 8.5e-53
NP_001009934 (OMIM: 300081) deoxyribonuclease-1-li ( 302)  626 163.7 3.7e-40
NP_001009932 (OMIM: 300081) deoxyribonuclease-1-li ( 302)  626 163.7 3.7e-40
XP_016884821 (OMIM: 300081) PREDICTED: deoxyribonu ( 302)  626 163.7 3.7e-40
NP_006721 (OMIM: 300081) deoxyribonuclease-1-like  ( 302)  626 163.7 3.7e-40
XP_005277886 (OMIM: 300081) PREDICTED: deoxyribonu ( 302)  626 163.7 3.7e-40
NP_001290549 (OMIM: 300081) deoxyribonuclease-1-li ( 302)  626 163.7 3.7e-40
NP_001009933 (OMIM: 300081) deoxyribonuclease-1-li ( 302)  626 163.7 3.7e-40
XP_011529424 (OMIM: 300081) PREDICTED: deoxyribonu ( 302)  626 163.7 3.7e-40
XP_016878492 (OMIM: 125505,152700) PREDICTED: deox ( 187)  591 154.9 1.1e-37
XP_016878494 (OMIM: 125505,152700) PREDICTED: deox ( 187)  591 154.9 1.1e-37
XP_016878493 (OMIM: 125505,152700) PREDICTED: deox ( 187)  591 154.9 1.1e-37
XP_016878495 (OMIM: 125505,152700) PREDICTED: deox ( 187)  591 154.9 1.1e-37
XP_016878489 (OMIM: 125505,152700) PREDICTED: deox ( 279)  591 155.0 1.5e-37
NP_001365 (OMIM: 602622) deoxyribonuclease-1-like  ( 299)  556 146.3 6.4e-35
NP_001288609 (OMIM: 602622) deoxyribonuclease-1-li ( 299)  556 146.3 6.4e-35
XP_011520701 (OMIM: 602622) PREDICTED: deoxyribonu ( 390)  556 146.4   8e-35
NP_001243489 (OMIM: 602244,614420) deoxyribonuclea ( 275)  547 144.1 2.8e-34


>>XP_016878488 (OMIM: 125505,152700) PREDICTED: deoxyrib  (282 aa)
 initn: 1875 init1: 1875 opt: 1875  Z-score: 2520.1  bits: 474.2 E(85289): 1.2e-133
Smith-Waterman score: 1875; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280  
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
       ::::::::::::::::::::::::::::::::::::::::::
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
              250       260       270       280  

>>NP_005214 (OMIM: 125505,152700) deoxyribonuclease-1 pr  (282 aa)
 initn: 1875 init1: 1875 opt: 1875  Z-score: 2520.1  bits: 474.2 E(85289): 1.2e-133
Smith-Waterman score: 1875; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280  
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
       ::::::::::::::::::::::::::::::::::::::::::
NP_005 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
              250       260       270       280  

>>XP_011520695 (OMIM: 125505,152700) PREDICTED: deoxyrib  (282 aa)
 initn: 1875 init1: 1875 opt: 1875  Z-score: 2520.1  bits: 474.2 E(85289): 1.2e-133
Smith-Waterman score: 1875; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280  
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
       ::::::::::::::::::::::::::::::::::::::::::
XP_011 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
              250       260       270       280  

>>XP_005255205 (OMIM: 125505,152700) PREDICTED: deoxyrib  (276 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.9  bits: 450.0 E(85289): 2.2e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280  
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
       :::::::::::::::::::::::::::               
XP_005 MLLRGAVVPDSALPFNFQAAYGLSDQLVCVLPCTAT      
              250       260       270            

>>XP_016878486 (OMIM: 125505,152700) PREDICTED: deoxyrib  (304 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.3  bits: 450.1 E(85289): 2.4e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK                  
       :::::::::::::::::::::::::::                                 
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLFSVHTCSGAGLGERHGLPASAALPSNTCRAGTH
              250       260       270       280       290       300

>>XP_016878485 (OMIM: 125505,152700) PREDICTED: deoxyrib  (304 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.3  bits: 450.1 E(85289): 2.4e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK                  
       :::::::::::::::::::::::::::                                 
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLFSVHTCSGAGLGERHGLPASAALPSNTCRAGTH
              250       260       270       280       290       300

>>XP_016878483 (OMIM: 125505,152700) PREDICTED: deoxyrib  (304 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.3  bits: 450.1 E(85289): 2.4e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK                  
       :::::::::::::::::::::::::::                                 
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLFSVHTCSGAGLGERHGLPASAALPSNTCRAGTH
              250       260       270       280       290       300

>>XP_016878484 (OMIM: 125505,152700) PREDICTED: deoxyrib  (304 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.3  bits: 450.1 E(85289): 2.4e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK                  
       :::::::::::::::::::::::::::                                 
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLFSVHTCSGAGLGERHGLPASAALPSNTCRAGTH
              250       260       270       280       290       300

>>XP_016878482 (OMIM: 125505,152700) PREDICTED: deoxyrib  (304 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.3  bits: 450.1 E(85289): 2.4e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK                  
       :::::::::::::::::::::::::::                                 
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLFSVHTCSGAGLGERHGLPASAALPSNTCRAGTH
              250       260       270       280       290       300

>>XP_016878487 (OMIM: 125505,152700) PREDICTED: deoxyrib  (304 aa)
 initn: 1778 init1: 1778 opt: 1778  Z-score: 2389.3  bits: 450.1 E(85289): 2.4e-126
Smith-Waterman score: 1778; 100.0% identity (100.0% similar) in 267 aa overlap (1-267:1-267)

               10        20        30        40        50        60
pF1KE1 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAG
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 MLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK                  
       :::::::::::::::::::::::::::                                 
XP_016 MLLRGAVVPDSALPFNFQAAYGLSDQLFSVHTCSGAGLGERHGLPASAALPSNTCRAGTH
              250       260       270       280       290       300




282 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 22:31:13 2016 done: Sun Nov  6 22:31:14 2016
 Total Scan time:  6.840 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com