GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:33:34

Sequence gi568815596f:98420049_98687605 : 267557 bp : 43.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1491   1530   40                              -2.76
 1.01 Init +  13418  13490   73  1  1   39   43   102 0.650   2.03
 1.02 Term +  16630  16721   92  2  2  126   42    38 0.413   0.88
 1.03 PlyA +  23364  23369    6                               1.05

 2.02 PlyA -  23399  23394    6                               1.05
 2.01 Sngl -  25425  24577  849  0  0   67   42   314 0.909  19.59
 2.00 Prom -  44780  44741   40                              -3.96

 3.14 PlyA -  46729  46724    6                               1.05
 3.13 Term -  47592  47413  180  0  0   -6   38   137 0.170  -3.09
 3.12 Intr -  50473  50341  133  0  1  110   89    65 0.989   9.45
 3.11 Intr -  52128  51941  188  0  2   65   37   120 0.790   3.09
 3.10 Intr -  54671  54612   60  2  0   64   94    46 0.485   1.73
 3.09 Intr -  57323  57145  179  0  2   74  -18   138 0.212   1.44
 3.08 Intr -  61278  61184   95  2  2   82   60    41 0.084   0.31
 3.07 Intr -  64438  64320  119  1  2   92   53    25 0.137  -1.34
 3.06 Intr -  69146  69085   62  0  2  145   65    42 0.435   6.05
 3.05 Intr -  70294  70134  161  0  2  110   82    -1 0.665   1.13
 3.04 Intr -  85402  85302  101  1  2  114   82    78 0.873   8.71
 3.03 Intr -  86663  86552  112  1  1   88   46    18 0.536  -2.02
 3.02 Intr -  88066  87896  171  0  0  128   91    94 0.986  12.76
 3.01 Init -  91750  91581  170  1  2   62   90    65 0.335   3.11
 3.00 Prom -  92568  92529   40                              -8.26

 4.00 Prom +  96938  96977   40                              -2.46
 4.01 Init + 100001 100138  138  1  0   79   80   127 0.513  11.21
 4.02 Term + 100216 100434  219  0  0   60   36   110 0.381   0.04
 4.03 PlyA + 100508 100513    6                               1.05

 5.00 Prom + 101117 101156   40                              -2.86
 5.01 Init + 114937 115082  146  0  2   74   22   116 0.369   3.27
 5.02 Intr + 117815 117926  112  2  1   68   96   185 0.893  17.68
 5.03 Intr + 118389 118472   84  2  0  122  119   -62 0.519   0.32
 5.04 Intr + 118843 118933   91  0  1   39   64    84 0.904   0.67
 5.05 Intr + 119480 119627  148  0  1   79   94   255 0.999  24.49
 5.06 Intr + 123829 123959  131  1  2  104   90   190 0.999  21.14
 5.07 Intr + 125921 126025  105  0  0   87   82    20 0.729   1.49
 5.08 Intr + 126538 126646  109  2  1   20   98   180 0.997  11.54
 5.09 Intr + 130367 130471  105  2  0   64   69    77 0.861   2.73
 5.10 Intr + 132738 132921  184  0  1   45   97   231 0.974  19.49
 5.11 Intr + 134223 134441  219  2  0   84   92   294 0.998  27.90
 5.12 Intr + 135505 135643  139  0  1   11   86   269 0.995  19.04
 5.13 Intr + 143417 143589  173  0  2  129   78   337 0.999  36.46
 5.14 Intr + 144592 144715  124  0  1  117   89   313 0.995  34.46
 5.15 Intr + 145592 145718  127  0  1  118    5   199 0.999  14.34
 5.16 Intr + 145981 146121  141  1  0  105   92   266 0.887  28.17
 5.17 Intr + 148523 148620   98  2  2   43   87   154 0.820  10.45
 5.18 Intr + 152767 152879  113  2  2  119   69    92 0.983  10.50
 5.19 Intr + 156941 157095  155  1  2   72  109   226 0.987  21.97
 5.20 Term + 167428 167560  133  1  1  104   47   106 0.608   5.66
 5.21 PlyA + 167592 167597    6                               1.05

 6.03 PlyA - 167660 167655    6                               1.05
 6.02 Term - 173183 173020  164  0  2   35   38   135 0.448   1.30
 6.01 Init - 174433 174346   88  1  1   78   64    43 0.403   1.70
 6.00 Prom - 174557 174518   40                              -2.46

 7.04 PlyA - 175320 175315    6                               1.05
 7.03 Term - 181630 181526  105  1  0   99   54    29 0.777  -0.99
 7.02 Intr - 184143 184060   84  0  0   78  103    29 0.853   3.42
 7.01 Init - 188357 188259   99  2  0   95   74   140 0.975  13.57
 7.00 Prom - 201471 201432   40                              -3.96

 8.10 PlyA - 202354 202349    6                               1.05
 8.09 Term - 214820 214764   57  2  0   90   42    58 0.618  -0.91
 8.08 Intr - 216547 216469   79  0  1   81   86    64 0.922   5.05
 8.07 Intr - 219953 219760  194  2  2   83   81   121 0.862   9.19
 8.06 Intr - 224005 223875  131  2  2   77   92    66 0.404   6.31
 8.05 Intr - 225164 225136   29  1  2   35   93    36 0.139  -3.44
 8.04 Intr - 236417 236304  114  1  0   58  105    62 0.699   4.46
 8.03 Intr - 238216 238170   47  1  2   71   89    53 0.875   0.91
 8.02 Intr - 243131 242998  134  0  2   84   76    64 0.890   5.16
 8.01 Intr - 258423 258256  168  1  0  109   87   112 0.841  13.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_1|54_aa
MDGSSQRENEEDVKVETPDKTIKSRRETPNGHATGALDHSPFCQGPLDRPLREL

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_1|165_bp
atggatggcagcagtcaaagagagaatgaggaagatgtaaaagtggaaacccctgataaa
accatcaaatctcgccgtgaaactccaaacggtcatgcaactggagccttggaccacagc
cccttctgccagggacccttagataggcctctgagggagctctga

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_2|282_aa
MHVYFHPVMFPPQTRQGLQLQEPVDPALEPHRAGTASASRGHAPARHPAPCWGGRVFTGL
GVGRARIVLKRRHRRWTTGTVRQCNFHENRGRRPHPPQRGPGRAPAPAVRPRPRPPRRPR
RLLPGPAHLPGAPRPPAPAAPLSRRAARQSPAAAAAPPPGCEVAGCGPGLRCWSSCPGPR
SPTRRQTSSEPSTRAAALASRRRSRRRAQPRPGPAPLSRMRAEGPARALRPPPHYQPELG
PPSETVGPVTELLAPIPTARFPQDPTLSCDCFTCKEFLNFWT

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_2|849_bp
atgcatgtttactttcacccggttatgtttccaccccaaacacggcaaggcctccagctt
caggagcccgtagacccagccctggagccgcatcgggcaggcaccgcgtctgcgtcccgc
ggccacgcgcccgctcggcacccggctccctgctggggcggccgcgtcttcacggggctg
ggggtcggccgggctcggattgttctcaaaagacgccaccgcaggtggaccactggcacc
gttaggcagtgcaatttccatgaaaaccgcgggcgccgtccacatccgccccagcgggga
cctggacgcgcccccgcgcccgctgtccgtccccggccccggcccccgcggcggccgcgt
cgcctcctgcccggcccggcccacctacctggcgctccccggcccccggcgccagccgcc
ccgctgtcccgccgggctgcgcgccagagccccgcagcagcagcagcgccgccgcctggc
tgtgaagtcgcgggctgcgggcccggcctcaggtgctggtcctcctgccccggcccacgg
agcccgacccggcggcaaaccagcagcgaaccctccacgcgcgccgcagccctagccagc
cgccgccgctctagacgccgggcgcagccccgccctggccccgcccccttgtcgcgcatg
cgcgctgagggcccggcccgcgccctgcgacccccgccccactaccagcccgagctgggt
ccgccctctgagacagtagggccggtgaccgagctgctcgcgccaattcctactgctagg
ttcccacaagatcccaccctatcctgtgactgcttcacctgcaaggagttcttgaacttc
tggacttga

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_3|576_aa
MASDLVNRCEACDLPQGPISVHQFPRLSNEVTTTVGRNSESPNQRSVSGPWTPREVRRGV
AAAAHGFSGQNAKWAAHIPATAMSFALPYSVLHSPHALTTHPLNPGDAVTMPSWTSTVSA
ANASKGRSFSQCFQSTEEGQERRRPRTSQAKVQQGSTAGKVNELITLAGHIKSQAPHGKR
KPPPRDSHVICSMLRKRKPDETPSPSSDAQFSGMLAVAVSSLLCPRSSPSQQWHCHSPST
TILGSSDVSDTSFQPSTKLGPVHGFPPQSRDCILDFELIRKVTGAWSSLTAGSWETKIQE
FSEEDILAPHRITPGPHSSKSPVHFLASLWGRKTKLYHHTIQDKEPRSVPEAGSSGRRDG
GGAAHSMLCMAPEPDHPGSNPNCRSPATLHADADGNLQREAAKCQGDGTQVSTHVDHTSA
PRQAETGPATGENEKMESHGRSKRGLVGADQCPAETLDSYTLLVGHKKRDKDSAWLRRRK
APPGLLAGAEAQRAMPPCGGKGQTTKEQGLRAQKQRQEKKLHIKNTEVKSMEAEKIISTQ
FQGQRTLMMLGSLDLLSPHVDGVANIADSFTVLTAT

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_3|1731_bp
atggcatcagacctggtgaaccgctgtgaagcatgtgaccttccacagggtcccatctct
gtgcatcagtttcctcgcctgtcaaatgaagttacgactactgttggaaggaattcagag
tctcccaatcagaggagtgtgagtggaccctggactcccagggaagtgaggagaggtgtg
gctgcagctgctcatggcttctcaggacagaatgcaaagtgggcggcccacatcccagcc
acagcaatgtcctttgccttgccgtacagtgttttgcattcaccccatgccctcaccacc
caccccctcaacccaggggatgcagtgacgatgccatcatggacttcaacagtgtctgct
gccaatgcaagcaagggacgtagtttctcacaatgtttccaatccacagaagagggtcaa
gagaggaggagaccaagaacttctcaggccaaggttcaacaaggaagcactgcagggaaa
gtgaacgagctcatcactctggctggacacataaaaagtcaggccccacatgggaaacgc
aagcctccaccaagagattcccatgtgatatgcagcatgctcagaaaaaggaaaccggat
gagacacccagcccttcaagtgatgcccaattttctgggatgctcgctgttgctgtgtcc
agcctgctctgcccccggtcttctccatctcagcaatggcactgccattctccaagtacc
accattcttgggagctcagatgtatctgacacctctttccaaccatcaaccaaactgggc
cctgtgcatggcttcccaccccagtcacgtgactgcattctggactttgagctcatcagg
aaagtaactggggcttggtcttccctgactgcaggatcatgggaaacaaagatacaggaa
ttttcagaggaagacatccttgctccacacaggatcacaccaggtccacattcctccaag
tctcctgttcacttcctggcctctctgtggggcaggaagaccaagctgtaccaccacacc
attcaggacaaagagccaagaagcgtgcctgaagcaggcagctcagggagacgggacggc
gggggagctgcacacagcatgctgtgcatggccccagagccagaccatccgggctccaac
cccaactgccgctcacccgccacgctacacgctgatgctgatggcaatctgcaaagagag
gctgccaaatgtcagggtgatggcacccaggtctccacccatgtggaccatacttctgct
ccacggcaggcagaaacaggcccagccacaggagagaacgagaaaatggagtcacatggg
agatcaaaaagaggccttgttggagcagaccaatgcccagctgaaactcttgattcctac
accctccttgtggggcacaaaaagagggacaaggacagtgcctggctgagaaggcgaaag
gccccaccaggcctccttgcaggggccgaagcccagcgggccatgcctccctgcggaggg
aagggacagaccactaaggagcaaggacttagagctcagaagcagcgccaagaaaagaag
cttcacatcaagaacacagaagttaaatccatggaggctgagaagataatttccactcag
ttccaagggcaaaggacactgatgatgctaggttcactggacctgttgtccccacatgtg
gacggtgtcgctaacattgctgacagcttcacagtcttaacagcaacataa

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_4|118_aa
MTAREHSPRHGARARAMQRASTIDVAADMLGLSLAGEPHRACTGLQTTGYPGLASFWLNQ
EIGKGDVSPLPVNRFCWSLTTLVFQFGGRGTTRVVWECPSVLLAHAQAMVKALPVVDV

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_4|357_bp
atgacagcaagagagcacagccctcgccatggtgccagggcccgtgcaatgcagcgggct
tccaccatcgacgtggcggccgacatgctgggcctctctctggcaggtgagcctcacagg
gcctgcaccgggctccagactacagggtaccctggtttggcatccttctggttgaaccag
gaaatagggaagggggatgtcagccctcttcctgtgaaccgcttctgctggagcctgact
acattagttttccagtttggtggcaggggcaccaccagggtagtgtgggaatgtccaagt
gttttgctggcccatgcccaggccatggtaaaagccctccctgttgtggatgtgtag

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_5|878_aa
MSWLRPQQPTQVELSSQLDHLDLDLQREKGARGPGNGGCDNYLVPERVWSAESDRVGNIT
VIGWQMEEKSDQRPPVTRSVDTVNGRLHPPAPTVMHSLSHRHSKKNSNFRALALMVLPVD
ESLTEALGIRSKYASLRKDTLLKSVFGGAICRMYRFPTTDGNHLRILEQMAESVLSLHVP
RQFVKLLLEEDAARVCELEELGELSPCWESLRRQIVTQYQTIILTYQENLTDLHQYRGPS
FKASSLKADKKLEFVPTNLHIQRMRVQDDGGSDQNYDIVTIGAPAAHCQGFKSGGLRKKL
HKFEETKKQVTVAQQLPAVPGQGHKTPPLRSHGIFSLAHDPSSGTSSGCQSIIYIPQDVV
RAKEIIAQINTLKTQVSYYAERLSRAAKDRSATGLERTLAILADKTRQLVTVCDCKLLAN
SIHGLNAARPDYIASKASPTSTEEEQVMLRNDQDTLMARWTGRNSRSSLQVDWHEEEWEK
VWLNVDKSLECIIQRVDKLLQKERLHGEGCEDVFPCAGSCTSKKGEWSEALYPLLTTLTD
CVAMMSDKAKKAMVFLLMQDSAPTIATYLSLQYRRDVVFCQTLTALICGFIIKLRNCLHD
DGFLRQLYTIGLLAQFESLLSTYGEELAMLEDMSLGIMDLRNVTFKVTQATSSASADMLP
VITGNRDGFNVRVPLPGPLFDALPREIQSGMLLRVQPVLFNVGINEQQTLAERFGDTSLQ
EVINVESLVRLNSYFEQFKEVLPEDCLPRSRSQTCLPELLRFLGQNVHARKNKNVDILWQ
AAEICRRLNGVRFTSCKSAKDRTAMSVTLEQCLILQHEHGMAPQVFTQALECMRSEGCRR
ENTMKNVGSRKYAFNSLQLKAFPKHYRPPEGTYGKVET

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_5|2637_bp
atgagttggttgaggccccagcagcccacccaggtggagctgtccagtcagcttgaccac
ctggatctggatctccagagagaaaaaggagccagaggcccagggaatggtggctgtgat
aattacctggtgcctgagagagtatggtctgcagagagtgaccgtgtaggtaacatcacc
gtgattggctggcagatggaggagaagtcagaccaacggccccctgtgacccggtctgtg
gacactgtcaatgggaggctacaccctcctgcacccactgtcatgcatagtctctcacac
agacactcaaagaaaaattctaatttcagagccctagcgctgatggttcttcctgtcgat
gagagcttgacggaggcgttaggaatccgatccaaatacgcttcattgcgaaaggacact
ttgctgaaatcggtgttcggtggtgccatctgccgcatgtaccggtttccaaccactgat
ggtaaccatttgcggatcctggagcagatggcagagagcgtgctctccctgcacgtgccc
cggcagttcgtgaagctcctactagaggaagatgcagccagagtgtgtgagctggaggag
ctgggagagctgtccccttgctgggagagcctccggcgccaaattgtcacccagtaccag
accatcatcctcacataccaggagaacctgaccgacctccatcagtacagagggccctcg
tttaaagcaagcagtttgaaagcagataaaaagttagaatttgttcccacaaacttgcac
atacaaaggatgagagttcaagacgatggaggatcagatcagaactacgacatcgtcacc
attggggcgccagcagcacactgccaaggttttaagtcaggaggtctccgcaaaaagctg
cacaaatttgaagagaccaagaaacaagtgactgttgctcagcagttaccagcagttcct
ggccagggccacaagactccacccttacgctctcatggcatcttcagtttagcccatgac
cccagctctggtacatcatctggctgccagtccataatctacataccccaggatgttgtc
agagccaaggagatcatcgcccagatcaacaccctgaaaacccaagtgagttactacgca
gagcggctgtcaagggcagccaaggacaggtctgccactggccttgagaggacactcgcc
atcttggcagacaagacacggcagctggtcacggtctgcgactgcaagctcctggccaac
tccatccatgggctgaacgctgcacggcctgactacattgcctccaaggcctctcccact
tcgactgaggaggagcaggtgatgcttagaaatgaccaggacaccctcatggcccggtgg
acagggagaaacagccgatcttccctgcaggtggactggcacgaggaggagtgggagaaa
gtgtggctgaacgtggacaagagcctagagtgcatcattcagcgtgtggacaagctgctg
cagaaggagcggctgcatggcgagggctgtgaggatgtcttcccctgtgcaggcagctgc
accagcaagaaaggtgaatggagtgaggccctttacccgctgctgaccactctcaccgac
tgcgtggccatgatgagtgacaaggccaagaaggccatggtattcctgctcatgcaggac
agcgcgcccaccatagccacctacctgagcctgcagtaccgccgtgacgtggtcttctgc
cagacgctgaccgccctcatctgcggcttcatcattaagctgaggaactgcctgcatgac
gacggcttcctgcgccagctctacaccatcgggctgctggcccagttcgagagcctgctg
agcacctacggggaggagctggcaatgctggaggacatgagccttgggatcatggacttg
aggaacgtgaccttcaaagtcactcaggccacttccagcgcctccgcagacatgctgccc
gtcatcacaggaaatcgcgacgggtttaacgtgcgggtccctctgccgggcccgctgttt
gacgccttgccccgggagatccagagtggcatgctgctgcgagtgcagcccgtcctcttc
aacgtgggcatcaatgagcagcagacactggccgagaggtttggcgatacgtctttacaa
gaagtcatcaacgtggagagtttggtgcggttaaattcctactttgagcagtttaaggaa
gttttgcctgaggattgcctgcctcggtctcgcagtcagacgtgcctgccagagctgctg
cggtttctgggtcagaacgtgcatgcccggaagaataagaacgtcgacattctctggcaa
gctgctgagatctgccgccgccttaatggggtccggttcaccagctgcaagagcgctaag
gaccgtacagccatgtcggtgacactggagcagtgcctgatcctgcaacacgagcatggc
atggccccgcaggtcttcacccaggccctggagtgcatgcgcagtgagggttgtcgaaga
gaaaatacaatgaagaatgttggaagtcgcaaatatgcatttaattccctgcagctgaag
gctttccccaagcattacaggcctcccgaagggacttacggaaaagttgaaacgtga

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_6|83_aa
MEYYAAIKNDEFMSFVGTWMKLEIIILSNAFSVMWDNSVKDLPGLACKAHRGLMQEEIMA
KTGFQWRESRVWVFSGYTLGTLS

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_6|252_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaattggaaatcatcattctcagtaatgctttttctgttatgtgggacaacagtgtgaaa
gacctgcctggactggcctgcaaggcccacaggggcctgatgcaggaagaaatcatggca
aagacagggttccagtggagggaatctagagtatgggtgttttcaggctacaccctggga
accctgtcgtag

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_7|95_aa
MPKYYEDKPQGGACAGLKEDLGACLLQSDCVVQEGKSPRQCLKEGYCNSLKYAFFECKRS
VAMDWYRSMAWRLGTPNIEFLGSDIDYASLPYKLT

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_7|288_bp
atgcctaagtattatgaggacaagccgcagggcggcgcgtgcgcgggcctgaaggaggac
ctgggcgcgtgtctgctgcagtcggactgtgtggtccaggaaggaaaatcacctcggcag
tgtttgaaggaaggatactgcaactctttgaagtacgcattttttgagtgtaaaagatca
gtggccatggactggtacaggtctatggcctggaggttagggacccccaatatagaattt
ttggggagtgacattgactatgcaagtttgccttacaaactgacttga

>gi568815596f:98420049_98687605|GENSCAN_predicted_peptide_8|317_aa
XKLIAYQREFLALKERLRIAEHRISQRSSELNTIVQQFKRVGAETNGSKDALNKFSVSIV
MGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEFSK
EISSGLVEVISPPESYYPDLTNLKETFGDSKERVSVLHNANRGAGKMFQAPDLTLIVEFI
FMFYKEKPIDWLLDHILWVKVCNPEKDADKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTL
EKTYMGEDFFWAITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKR
HICVEMSTDIALYLAAT

>gi568815596f:98420049_98687605|GENSCAN_predicted_CDS_8|954_bp
naaaaactgattgcttatcaacgagaattccttgctttgaaagaacgtcttcgaatagct
gaacacagaatctcacagcgctcttctgaattaaatacgattgtgcaacagttcaagcgt
gtaggagcagaaacaaatggaagtaaggatgcgttgaataagttttcagtttcaatagtc
atgggcattcccacagtgaagagagaagttaaatcttacctcatagaaactcttcattcc
cttattgataacctgtatcctgaagagaagttggactgtgttatagtagtcttcatagga
gagacagatattgattatgtacatggtgttgtagccaacctggagaaagaattttctaaa
gaaatcagttctggcttggtggaagtcatatcaccccctgaaagctattatcctgacttg
acaaacctaaaggagacatttggagactccaaagaaagagtaagcgttcttcacaatgcc
aaccgtggtgctggtaaaatgtttcaagcgccggatcttactctgattgtagaattcata
ttcatgttttacaaggagaaacccattgattggctcctggaccatattctctgggtgaaa
gtctgcaaccctgaaaaagatgcagataaagattatatgaaaccattacttcttaaaatc
catgtaaacccacctgcggaggtatctacttccttgaaggtctaccaagggcatacgctg
gagaaaacttacatgggagaggatttcttctgggctatcacaccgatagctggagactac
atcttgtttaaatttgataaaccagtcaatgtagaaagttatttgttccatagcggcaac
caagaacatcctggagatattctgctaaacacaactgtggaagttttgccttttaagcgt
cacatctgtgttgagatgtccactgacatagccttatacctggcagccacatag