GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:11:20

Sequence gi568815586r:114571844_114783200 : 211357 bp : 46.15% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3977   4054   78  2  0   77  116    37 0.421   4.07
 1.02 Term +  16428  16686  259  0  1   20   44   194 0.758   3.22
 1.03 PlyA +  17264  17269    6                               1.05

 2.00 Prom +  19471  19510   40                              -3.96
 2.01 Init +  27919  28054  136  0  1   59   36   117 0.213   3.90
 2.02 Intr +  38279  38350   72  0  0   97   69    53 0.182   3.68
 2.03 Term +  43207  43286   80  2  2   93   42    30 0.044  -3.17
 2.04 PlyA +  44014  44019    6                               1.05

 3.12 PlyA -  44914  44909    6                               1.05
 3.11 Term -  59682  59539  144  0  0   65   44   133 0.459   4.51
 3.10 Intr -  61490  61429   62  0  2   94   98    35 0.238   3.55
 3.09 Intr -  78193  77987  207  2  0   95   36    80 0.059   2.55
 3.08 Intr -  95352  95187  166  0  1    7   34   206 0.127   6.63
 3.07 Intr - 100459 100049  411  1  0  131   33   650 0.017  58.18
 3.06 Intr - 102992 102322  671  0  2   45   80   827 0.990  69.02
 3.05 Intr - 104627 104470  158  1  2   65   92   167 0.999  14.45
 3.04 Intr - 105813 105737   77  0  2   90  113    94 0.999  10.41
 3.03 Intr - 107808 107662  147  0  0  117   92   133 0.999  17.03
 3.02 Intr - 109303 109036  268  0  1   97   78   133 0.997  10.73
 3.01 Init - 111315 110969  347  0  2   92  121   471 0.948  45.49
 3.00 Prom - 111582 111543   40                              -7.86

 4.00 Prom + 112473 112512   40                              -3.06
 4.01 Init + 113439 113543  105  2  0   59   86    47 0.508   1.34
 4.02 Intr + 120393 120601  209  2  2   31   91   129 0.446   5.38
 4.03 Intr + 125328 125432  105  0  0   66   21   168 0.347   7.23
 4.04 Term + 164426 164657  232  2  1   73   50   115 0.224   2.15
 4.05 PlyA + 165155 165160    6                               1.05

 5.04 PlyA - 165901 165896    6                               1.05
 5.03 Term - 169249 168971  279  1  0   35   55   131 0.113  -0.05
 5.02 Intr - 175476 175375  102  0  0   71   87    41 0.169   2.67
 5.01 Init - 199867 199799   69  1  0   64   22   162 0.904   8.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100459  99998  462  1  0  131   41   687 0.973  63.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:114571844_114783200|GENSCAN_predicted_peptide_1|112_aa
XHYDCRLEHELWFKPSVVRKTDHFSPRTPDELCFEKGDIIYVTDMNDANWWKGTSKGRTG
LTPSNYVAEQAESIDNLLHEVAKRGNLSWLRECLDNRVGVNGLDKAGSTALD

>gi568815586r:114571844_114783200|GENSCAN_predicted_CDS_1|339_bp
nnccattatgactgccggttagaacatgaattatggtttaagcctagtgttgtgaggaag
acagatcatttttccccaagaactccagatgaactatgctttgagaaaggtgatatcatc
tacgttactgacatgaatgatgcaaattggtggaaaggcacctccaaaggcaggactgga
ctaactccaagcaactatgtggccgagcaggcagaatccattgacaatctattgcatgaa
gtagcaaaaagaggcaacttgagttggttgcgagagtgtttggacaaccgagtgggtgtt
aatggcttagacaaggctggaagcactgccttagactag

>gi568815586r:114571844_114783200|GENSCAN_predicted_peptide_2|95_aa
MWESLELPRHLLNGFDQNANKDVDNEVQAELVSDGDEELVGNWSKVDSGLLYWIQYENKE
TWVQLYYLPGHSARESLVTLWKVNCWSHYNNYTHG

>gi568815586r:114571844_114783200|GENSCAN_predicted_CDS_2|288_bp
atgtgggaaagtttggaacttcctagacacttgttgaatggttttgaccaaaatgctaat
aaggatgtggacaatgaagtccaggctgagctggtctcagatggagatgaggaacttgtt
gggaactggagcaaagtggatagtggcctcctttattggattcagtatgagaacaaggag
acctgggttcagctctattacttaccaggacactcagccagagagtcactggtcactctg
tggaaggttaattgctggtcccactacaataattacacccacggctag

>gi568815586r:114571844_114783200|GENSCAN_predicted_peptide_3|885_aa
MAYHPFLPHRAPDFAMSAVLGHQPPFFPALTLPPNGAAALSLPGALAKPIMDQLVGAAET
GIPFSSLGPQAHLRPLKTMEPEEEVEDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFP
PFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATG
EQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYLFP
ETEFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLQSMRVFDERHKKENG
TSDESSSEQAAFNCFAQASSPAASTVGTSNLKDLCPSEGESDAEAESKEEHGPEACDAAK
ISTTTSEEPCRDKGSPAVKAHLFAAERPRDSGRLDKASPDSRHSPATISSSTRGLGAEER
RSPVREGTAPAKVEEARALPGKEAFAPLTVQTDAAAAHLAQGPLPGLGFAPGLAGQQFFN
GHPLFLHPSQFAMGGAFSSMAAAGMGPLLATVSGASTGVSGLDSTAMASAAAAQGLSGAS
AATLPFHLQQHVLASQGLAMSPFGSLFPYPYTYMAAAAAASSAAASSSVHRHPFLNLNTM
RPRLRYSPYSIPVPVPDGSSLLTTALPSMAAAAGPLDGKVAALAASPASVAVDSGSELNS
RSSTLSSSSMSLSPKLCAEKEAATSELQSIQRLPADRQPPSGRYERLATLHDSALSASLV
SNVTSRQPAKKVAVGVQLRGRQRRPGFFCLDPALHGRVAGENNPLFLELTSVHGSGKEVP
ENGGWGADPADSRETTKAGIAMSGPSNKGLVVLPFSEGHFVALAKPSLLWLDWEKALKPH
AQVLHSKDNWVTECPGEDLEKPSGQFRGACAALSSELTQINVEPP

>gi568815586r:114571844_114783200|GENSCAN_predicted_CDS_3|2658_bp
atggcctaccatccgttcctacctcaccgggcgccggacttcgccatgagcgcggtgctg
ggtcaccagccgccgttcttccccgcgctgacgctgcctcccaacggcgcggcggcgctc
tcgctgccgggcgccctggccaagccgatcatggatcaattggtgggggcggccgagacc
ggcatcccgttctcctccctggggccccaggcgcatctgaggcctttgaagaccatggag
cccgaagaagaggtggaggacgaccccaaggtgcacctggaggctaaagaactttgggat
cagtttcacaagcggggcaccgagatggtcattaccaagtcgggaaggcgaatgtttcct
ccatttaaagtgagatgttctgggctggataaaaaagccaaatacattttattgatggac
attatagctgctgatgactgtcgttataaatttcacaattctcggtggatggtggctggt
aaggccgaccccgaaatgccaaagaggatgtacattcacccggacagccccgctactggg
gaacagtggatgtccaaagtcgtcactttccacaaactgaaactcaccaacaacatttca
gacaaacatggatttactatattgaactccatgcacaaataccagccccggttccacatt
gtaagagccaatgacatcttgaaactcccttatagtacatttcggacatacttgttcccc
gaaactgaattcatcgctgtgactgcataccagaatgataagataacccagttaaaaata
gacaacaacccttttgcaaaaggtttccgggacactggaaatggccgaagagaaaaaaga
aaacagctcaccctgcagtccatgagggtgtttgatgaaagacacaaaaaggagaatggg
acctctgatgagtcctccagtgaacaagcagctttcaactgcttcgcccaggcttcttct
ccagccgcctccactgtagggacatcgaacctcaaagatttatgtcccagcgagggtgag
agcgacgccgaggccgagagcaaagaggagcatggccccgaggcctgcgacgcggccaag
atctccaccaccacgtcggaggagccctgccgtgacaagggcagccccgcggtcaaggct
caccttttcgctgctgagcggccccgggacagcgggcggctggacaaagcgtcgcccgac
tcacgccatagccccgccaccatctcgtccagcactcgcggcctgggcgcggaggagcgc
aggagcccggttcgcgagggcacagcgccggccaaggtggaagaggcgcgcgcgctcccg
ggcaaggaggccttcgcgccgctcacggtgcagacggacgcggccgccgcgcacctggcc
cagggccccctgcctggcctcggcttcgccccgggcctggcgggccaacagttcttcaac
gggcacccgctcttcctgcaccccagccagtttgccatggggggcgccttctccagcatg
gcggccgctggcatgggtcccctcctggccacggtttctggggcctccaccggtgtctcg
ggcctggattccacggccatggcctctgccgctgcggcgcagggactgtccggggcgtcc
gcggccaccctgcccttccacctccagcagcacgtcctggcctctcagggcctggccatg
tcccctttcggaagcctgttcccttacccctacacgtacatggccgcagcggcggccgcc
tcctctgcggcagcctccagctcggtgcaccgccaccccttcctcaatctgaacaccatg
cgcccgcggctgcgctacagcccctactccatcccggtgccggtcccggacggcagcagt
ctgctcaccaccgccctgccctccatggcggcggccgcggggcccctggacggcaaagtc
gccgccctggccgccagcccggcctcggtggcagtggactcgggctctgaactcaacagc
cgctcctccacgctctcctccagctccatgtccttgtcgcccaaactctgcgcggagaaa
gaggcggccaccagcgaactgcagagcatccagcggttgccagcagacagacagccgcct
tcaggccgctacgagaggcttgcaacgcttcacgacagcgcgctttctgcctcgctggtt
tccaatgtgacctcacggcaaccagccaagaaagtggctgtcggggtgcagctgcgaggc
cgccagcggcgacctgggttcttctgcttggaccctgcgctccacggccgggtggctggg
gagaacaatccactctttctggaactgacatcagtccatgggagtgggaaggaagtgccc
gagaatgggggctggggggcagatcctgctgactccagggagacgacaaaagcaggcatt
gcaatgtcagggccctccaataagggccttgttgtccttcccttttccgagggtcatttt
gtggccctggctaaaccctccctgctttggctagactgggagaaggccctgaagccccat
gcacaagtcctgcacagcaaggacaactgggtcacagagtgcccgggggaggaccttgag
aagcccagtggccaatttagaggagcctgtgcggctctgagctcggagctgactcagatc
aacgtggagcctccctga

>gi568815586r:114571844_114783200|GENSCAN_predicted_peptide_4|216_aa
MEDLDKASTARDWVLSLSPPSRCPHLEARLGAQHRASLSTEPEKQLTASDSTLTQGWKGV
TGLGSCPKRCTGPQESKEVSDRLSFPSSRSRQGPDRPGNRRTACSSVLDFVRLIDEGDKL
AHGEVNTIDADLDETEESRRTSRFSNGLNKTQTMPDVQRTNDLASAYFSGLSFVPARDFP
LGTSSPPPPALLRFELWATLPTPSGFQQEKRFGGGG

>gi568815586r:114571844_114783200|GENSCAN_predicted_CDS_4|651_bp
atggaggatctggacaaagcgagcacagcgagagactgggttctgagcctgtcccctcca
agccgctgccctcacctcgaggcccggctgggtgcacagcacagggcctcgctgagcacg
gaaccggagaagcagctcacggcctcggattctactctcacccaagggtggaagggggtg
acagggctcggatcttgccccaaacgctgcacaggcccgcaggagagcaaagaggtctcg
gacaggctgtccttccccagctctcggtcgcgacaaggtcccgacaggcccgggaaccgg
cgaaccgcctgcagttctgtcctagacttcgttcggctgatcgatgaaggagacaagctg
gcccacggggaggtcaatacaatcgatgcggacctcgacgaaacggaagaatctcgcaga
acttcaaggttttccaacggtttgaataaaacccaaacgatgcccgatgtccaacgaacg
aatgatctagcctcggcctacttctcaggacttagctttgtccctgcccgcgacttcccg
ctgggaacgtcgtccccgccaccaccggctctgcttaggttcgaactctgggccactctt
cctactccctctggtttccagcaggagaagcgcttcggaggagggggctag

>gi568815586r:114571844_114783200|GENSCAN_predicted_peptide_5|149_aa
MKKKEKEEEEEKKEKEKEEKASTPSEDADVINVTCDHHVSRQDPPKPGRQRNKLDPKALT
CKAFGLGDPEPTPTLSSTPPRKRRPHTNPSDGETIYFSCGSTCSLSLGRDQEALWVPDKE
RVLLQRYSEPPTAITLQKPGSLDFIELQD

>gi568815586r:114571844_114783200|GENSCAN_predicted_CDS_5|450_bp
atgaagaagaaggagaaggaggaggaggaggagaagaaggagaaggagaaggaggagaag
gcaagcacgccctcggaagatgcagacgtgattaatgtcacctgtgaccaccatgtctcc
aggcaagacccccccaaacccggcagacagagaaacaaattagatccaaaggcattaaca
tgcaaagcttttgggcttggagaccctgagccgacacccaccttgagttccacaccccca
agaaaaaggaggccccacacaaatcccagtgatggggagacaatctacttctcttgtgga
agcacatgtagcctatccctgggccgggatcaagaggccctttgggtgcctgacaaagaa
agggtgcttcttcaaagatacagtgaacctccaactgccatcaccctccagaagcctggg
agcctcgatttcatagaacttcaggattga