GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:18:37

Sequence gi568815596f:112960851_113162674 : 201824 bp : 42.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   1104    932  173  0  2   97   86   225 0.927  22.16
 1.00 Prom -   5961   5922   40                              -4.55

 2.00 Prom +   6778   6817   40                              -6.55
 2.01 Init +  10173  10291  119  2  2   63   81    88 0.498   5.32
 2.02 Intr +  14122  14261  140  1  2   16   38   125 0.074  -0.51
 2.03 Intr +  18371  18475  105  0  0   32  109   141 0.934   9.87
 2.04 Intr +  19159  19298  140  2  2   85   87    69 0.636   5.76
 2.05 Term +  23990  24199  210  1  0   59   43   134 0.844   2.31
 2.06 PlyA +  24756  24761    6                               1.05

 3.04 PlyA -  25648  25643    6                               1.05
 3.03 Term -  32132  31990  143  0  2   79   45   113 0.057   3.21
 3.02 Intr -  34026  33947   80  2  2   61   86    76 0.059   2.98
 3.01 Init -  36241  36186   56  1  2  102   84    35 0.092   5.31
 3.00 Prom -  41757  41718   40                              -7.15

 4.00 Prom +  44570  44609   40                              -5.25
 4.01 Init +  45022  45031   10  0  1   81   98    -2 0.640   0.88
 4.02 Intr +  45124  45237  114  2  0   81  109   105 0.993  11.40
 4.03 Intr +  45748  45887  140  2  2   58  113   141 0.931  12.86
 4.04 Term +  46982  47194  213  1  0   75   45   144 0.938   5.05
 4.05 PlyA +  48649  48654    6                               1.05

 5.00 Prom +  54598  54637   40                              -4.75
 5.01 Sngl +  56756  56986  231  1  0   63   45   471 0.997  35.16
 5.02 PlyA +  57650  57655    6                               1.05

 6.08 PlyA -  58829  58824    6                               1.05
 6.07 Term -  65382  65134  249  0  0   79   38   122 0.087   1.02
 6.06 Intr -  68210  68089  122  0  2   47  113    71 0.533   4.79
 6.05 Intr -  70305  70198  108  1  0   62  105    84 0.952   6.84
 6.04 Intr -  70916  70847   70  2  1   51  111    13 0.255  -2.26
 6.03 Intr -  73428  73283  146  1  2   36   73   151 0.107   7.48
 6.02 Intr -  84644  84457  188  1  2   20   52   136 0.329   1.61
 6.01 Init -  86410  86310  101  1  2   96   76    58 0.598   5.18
 6.00 Prom -  86846  86807   40                              -8.65

 7.00 Prom +  87178  87217   40                              -7.05
 7.01 Init +  88122  88200   79  2  1   22   60   142 0.625   6.07
 7.02 Intr +  90376  90545  170  2  2   49   37   190 0.398   8.74
 7.03 Intr +  93970  94179  210  0  0   81    3   113 0.084   0.29
 7.04 Intr +  98562  98617   56  2  2   82  117    42 0.239   3.36
 7.05 Intr + 100002 100087   86  0  2   89   81    62 0.680   4.14
 7.06 Intr + 101169 101401  233  1  2   60   78   184 0.486  11.17
 7.07 Term + 101603 101827  225  1  0  126   49   220 0.988  17.70
 7.08 PlyA + 103418 103423    6                               1.05

 8.00 Prom + 104900 104939   40                              -5.95
 8.01 Init + 106246 106376  131  0  2   75   11   137 0.490   4.37
 8.02 Intr + 111861 111920   60  0  0   97  103     7 0.422   0.03
 8.03 Intr + 113365 113564  200  1  2    5   99   185 0.689   9.37
 8.04 Intr + 113873 114000  128  0  2  143   78    42 0.729   8.18
 8.05 Intr + 114302 114510  209  1  2  111   58   184 0.568  14.65
 8.06 Term + 115126 115324  199  1  1   21   42   152 0.450  -0.21
 8.07 PlyA + 115868 115873    6                               1.05

 9.06 PlyA - 116028 116023    6                              -0.45
 9.05 Term - 116708 116545  164  0  2  -64   49   449 0.041  22.92
 9.04 Intr - 124029 123885  145  0  1   92   17   108 0.006   3.03
 9.03 Intr - 136332 136181  152  1  2   38   59   132 0.224   4.26
 9.02 Intr - 137629 137521  109  1  1   62   42    57 0.196  -2.56
 9.01 Init - 138807 138661  147  0  0   35   74   112 0.237   4.64
 9.00 Prom - 140764 140725   40                              -6.65

10.00 Prom + 150286 150325   40                              -5.65
10.01 Init + 156233 156368  136  1  1   77   80   128 0.851  11.25
10.02 Intr + 159216 159278   63  1  0   76   61   139 0.048   7.77
10.03 Intr + 166839 166890   52  1  1  112  110    49 0.103   6.55
10.04 Intr + 167769 167891  123  0  0   76   90    59 0.763   3.68
10.05 Intr + 168726 168814   89  0  2   96  113    63 0.908   8.30
10.06 Intr + 170195 170307  113  0  2  150   83    74 0.987  12.28
10.07 Term + 171806 172021  216  1  0  107   38   305 0.987  23.56
10.08 PlyA + 172899 172904    6                               1.05

11.04 PlyA - 173786 173781    6                               1.05
11.03 Term - 174512 174398  115  1  1   92   36    59 0.006  -1.84
11.02 Intr - 196824 196725  100  1  1  107    1   213 0.252  12.75
11.01 Intr - 197018 196881  138  0  0   30   33   172 0.249   5.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 124515 124724  210  2  0   52   38   198 0.926   6.14
S.002 Term + 159216 159352  137  1  2   76   33   140 0.868   4.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_1|58_aa
MQVGAVKTQVPQAPQLASLCKAAAAAAEASARAEEQQEWTRCESMSTLKDGAPYKAES

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_1|174_bp
atgcaagttggtgctgtgaagacacaggtgcctcaggcaccacagctggccagcctctgc
aaagcagcagcagcagcagcagaagcctcagcaagagcagaggaacagcaggagtggact
cgttgtgagtccatgtctacactcaaagacggggcaccttacaaggctgaaagn

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_2|237_aa
MHTGSCENREKAATCEPRREPLGDTKTIDTLILDFQPPECLGFHRNQLQEDVMDQLIGSK
SLIMGLGYVEEQRLSAMSMHIIPSTLVCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVT
PVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPE
PVKPFLFYRAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_2|714_bp
atgcacacagggtcatgtgagaacagagagaaggcggccacctgtgagccaaggagagag
cccttaggagacaccaaaactattgacaccttgatcttggacttccagcctccagaatgt
ctggggtttcatagaaaccagcttcaggaagatgtaatggatcagctcataggaagcaag
tctttgataatgggcttgggctatgtggaggagcagaggctttcggccatgtccatgcac
atcattccatctacgttggtgtgtaaacctattactgggactattaatgatttgaatcag
caagtgtggacccttcagggtcagaaccttgtggcagttccacgaagtgacagtgtgacc
ccagtcactgttgctgttatcacatgcaagtatccagaggctcttgagcaaggcagaggg
gatcccatttatttgggaatccagaatccagaaatgtgtttgtattgtgagaaggttgga
gaacagcccacattgcagctaaaagagcagaagatcatggatctgtatggccaacccgag
cccgtgaaacccttccttttctaccgtgccaagactggtaggacctccacccttgagtct
gtggccttcccggactggttcattgcctcctccaagagagaccagcccatcattctgact
tcagaacttgggaagtcatacaacactgcctttgaattaaatataaatgactga

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_3|92_aa
MTNEKQLQCVALMENNKKGSFADTLLDRDSPNDDMSQTLLCHLAQGLLLKEAPQQSQIAK
TRLGTYINAWTSTNGYKNHNKSGNVHFTKQTK

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_3|279_bp
atgaccaatgagaagcagctgcagtgtgtggcactcatggaaaataacaaaaaggggtca
tttgctgacaccctgctagatagggacagccctaatgatgacatgtctcagactttgctc
tgccatcttgctcaaggcttactgctaaaggaagctccccaacaaagccagattgcaaag
actagattaggtacttacatcaatgcatggacatctacaaatggctacaagaatcacaat
aaatcagggaatgttcacttcaccaagcagacaaaataa

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_4|158_aa
MEKALKIDTPQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG
NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES
VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_4|477_bp
atggaaaaagcattgaaaattgacacacctcagcaggggagcattcaggatatcaatcat
cgggtgtgggttcttcaggaccagacgctcatagcagtcccgaggaaggaccgtatgtct
ccagtcactattgccttaatctcatgccgacatgtggagacccttgagaaagacagaggg
aaccccatctacctgggcctgaatggactcaatctctgcctgatgtgtgctaaagtcggg
gaccagcccacactgcagctgaaggaaaaggatataatggatttgtacaaccaacccgag
cctgtgaagtcctttctcttctaccacagccagagtggcaggaactccaccttcgagtct
gtggctttccctggctggttcatcgctgtcagctctgaaggaggctgtcctctcatcctt
acccaagaactggggaaagccaacactactgactttgggttaactatgctgttttaa

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_5|76_aa
MKKKKERKKKKKKKKKKKKKKKKKKKKEKKKERKKERKKEKRRKEEEGEGGEEEEKGAGG
GGGGRRREKEEKKSES

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_5|231_bp
atgaagaagaagaaggagaggaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaaggagaaaaagaaagaaagaaagaaagagagaaagaaagaa
aagagaagaaaagaagaagaaggagaaggaggagaagaagaagaaaaaggagctggagga
ggaggaggagggagaaggagggagaaggaggagaagaagagtgaatcatga

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_6|327_aa
MAEFGTGTENTQEQPKHVVVTKSKEILKKIHSDWFKKIDDPVHMKYEENYSSKIINKLLK
TSDTEKILKVAGGKRTQCIQIHKKKDDGRFFVRINTKEQEKLPAGEDKLAGQENQQNPVH
PEQGSQMGRDRRQQKDKEDPDHVGLPPHHHLIYLVLFTKGSEDIMNPQREAAPKSYAIRD
SRQMVWVLSGNSLIAAPLSRSIKPACRDTEFSDKEKGNMVYLGIKGKDLCLFCAEIQGKP
TLQLKLQGSQDNIGKDTCWKLVGIHTCINLDVRESCFMGTLDQWGIGVGEEQILLSIPQV
DNSEMRSFFMVPQRIPAVLRHNHPWQV

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_6|984_bp
atggctgaatttgggacgggcacagaaaatacacaagagcagcctaagcatgttgttgta
acaaaaagtaaggaaatacttaaaaaaatccacagtgattggttcaagaagattgatgac
cccgtgcacatgaaatatgaagaaaactacagcagcaaaatcataaacaaattgctcaaa
accagtgatactgagaaaatcttaaaagtagctggaggaaaaaggacacaatgcatacaa
atacataaaaagaaggatgacggcagattttttgtcagaatcaatacaaaggaacaggaa
aaactccctgcaggcgaagataagcttgcagggcaagaaaatcagcagaatccagtacat
ccagagcagggaagtcagatgggcagggatagaaggcagcagaaagataaagaggaccca
gatcatgtgggcttgcctcctcaccaccatctgatctatcttgttctcttcacaaaaggc
tctgaagacatcatgaacccacaacgggaggcagcacccaaatcctatgctattcgtgat
tctcgacagatggtgtgggtcctgagtggaaattctttaatagcagctcctcttagccgc
agcattaagcctgcctgtagagacacagaattcagtgacaaggaaaagggtaatatggtt
tacctgggaatcaagggaaaagatctctgtctcttctgtgcagaaattcagggcaagcct
actttgcagcttaagcttcagggctcccaagataacatagggaaggacacttgctggaaa
ctagttggaattcacacatgcataaacctggatgtgagagagagctgcttcatgggaacc
cttgaccaatggggaataggagtgggtgaggagcaaattctcttatccatcccacaggtg
gacaattctgagatgcgttcattcttcatggttcctcagaggatcccagcagtattgaga
cataatcacccatggcaggtctaa

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_7|352_aa
MLAIVLLNDDEEEASHNNDTDDGSCVVSCWRAMVKLHSPAEASPQALEASEAQTRKAPEC
GSGVQKLPVALALFMGLSQQKLWVMLMQEVGSHSLWKLHSCDFAGYNPPPGCFHGLTLSV
AFPGTQHKLLVDLPFWDLEDSGPLLTVPLDNAPGSLHPVELKMVLSGALCFRMKDSALKV
LYLHNNQLLAGGLHAGKVIKAWGQAVLQQSCALEPRTGEEGGKGIQGPASGLFPTGEEIS
VVPNRWLDASLSPVILGVQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRR
DMGLTSSFESAAYPGWFLCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_7|1059_bp
atgctagctattgttcttcttaatgatgatgaagaggaagcatcacacaataatgatact
gatgatggcagttgtgttgtttcctgctggagagcaatggtcaaactacacagtccggcg
gaggcgagtccgcaggctctggaagcctctgaggcacagacgaggaaagcgcctgaatgt
ggatctggggtacagaagttgccggtggctctggccctgttcatgggactcagtcagcag
aaactgtgggtcatgcttatgcaagaggtgggttcccatagtctttggaagctccactcc
tgtgactttgcagggtacaaccctcctcctggctgctttcatgggctgacactgtctgtg
gcttttccaggcacacagcataagctgttggtggatctaccattctgggatctggaggac
agtggccctcttctcacagttccactagacaatgccccagggagtctacaccctgtggag
ctcaagatggtcctgagtggggcgctgtgcttccgaatgaaggactcggcattgaaggtg
ctttatctgcataataaccagcttctagctggagggctgcatgcagggaaggtcattaaa
gcctgggggcaggccgtcttacagcagtcctgtgccctagagcccaggacaggggaagaa
ggagggaaaggcatccagggccctgcatctggcctctttcccacaggtgaagagatcagc
gtggtccccaatcggtggctggatgccagcctgtcccccgtcatcctgggtgtccagggt
ggaagccagtgcctgtcatgtggggtggggcaggagccgactctaacactagagccagtg
aacatcatggagctctatcttggtgccaaggaatccaagagcttcaccttctaccggcgg
gacatggggctcacctccagcttcgagtcggctgcctacccgggctggttcctgtgcacg
gtgcctgaagccgatcagcctgtcagactcacccagcttcccgagaatggtggctggaat
gcccccatcacagacttctacttccagcagtgtgactag

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_8|308_aa
MDGWMDGWMDEWMDERVDRRVDGWAHGWMDGWMDDGWMEEWTDGEDQTPLIAGMCSLPMA
RYYMRENRPNAQGGDSEHGSGRAWGPVVHKGNGPSALSYCFRIKYADQKALYTRDGQLLV
GDPVADNCCAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEEL
YKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE
QSCPSAMEPLETTKKPQAELSVLCTGTKPWAAYNLNSSSSLVIFYQILHSESTIPWLTVG
TVRYLPGA

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_8|927_bp
atggatggatggatggatggatggatggatgaatggatggatgaaagggtggacagaagg
gtggatggatgggcacatgggtggatggatggttggatggatgatggatggatggaagaa
tggacagatggtgaggaccagacaccactgattgcaggaatgtgttccctccccatggca
agatactacatgagagaaaatcgcccaaatgctcaaggtggtgattcagagcatggaagt
ggaagggcttgggggccagtggtgcataaagggaatgggccatcagcactgtcatactgt
ttcagaattaaatatgcagaccagaaggctctatacacaagagatggccagctgctggtg
ggagatcctgttgcagacaactgctgtgcagagaagatctgcatacttcctaacagaggc
ttggcccgcaccaaggtccccattttcctggggatccagggagggagccgctgcctggca
tgtgtggagacagaagaggggccttccctacagctggaggatgtgaacattgaggaactg
tacaaaggtggtgaagaggccacacgcttcaccttcttccagagcagctcaggctccgcc
ttcaggcttgaggctgctgcctggcctggctggttcctgtgtggcccggcagagccccag
cagccagtacagctcaccaaggagagtgagccctcagcccgtaccaagttttactttgaa
cagagctgtccatctgctatggagcctctagaaacaaccaagaagccccaggcagaactc
agtgtcctctgcacagggacaaagccctgggctgcttacaacttaaattctagctcaagt
cttgtgattttctaccagatacttcacagtgaatccacaattccgtggttgactgttggt
acagtccgctatctgccaggtgcttaa

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_9|238_aa
MNRAVYGDPHRELLLQELPQEHTRKAEKVHRPFEGGGLPLQAPWDSRGTQVLESMADRPE
DGSYHGILQILPSTSPEPSSSTGWPVLEVLARKIRQEKAIKDIQTSKEEVKLLLFADDMT
VYLENPKDSSRKFLELLRDDECLTILEGNHLSGCANNPCSSWQPEATILGGQSDRVTPLL
EIIHGGGGGGGEGGGGGEGEEGGGGGRRRGGRGGGEEEEEEEEEEEEEEEEGEEEEEE

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_9|717_bp
atgaacagagcagtgtatggagacccacatcgtgaacttttgctccaagaacttccacag
gaacataccaggaaagccgagaaagtccacagaccctttgaaggaggcggattgccactg
caggctccatgggacagtcgaggaactcaagtgctggaatccatggctgacagacctgaa
gacggatcatatcacgggattctgcagatactccccagtactagcccagagcccagtagc
tccactgggtggccagtactggaagtcctagccagaaaaatcagacaagagaaagcaata
aaggacatccaaacaagtaaagaggaagtcaaactgttgctgtttgctgatgacatgact
gtatacttagaaaaccctaaagactcatccagaaagttcctagaactgttgagagatgat
gagtgtctaacaattcttgaaggaaaccacttgagtggctgtgccaataatccatgctcc
agttggcagccagaagcaactattttaggaggtcaatctgatcgtgtcactcccctgctt
gaaatcatccatggaggaggaggaggaggaggagaaggaggaggaggaggagaaggagaa
gaaggaggaggaggaggaagaagaagaggaggaagaggaggaggagaggaggaagaagag
gaagaagaagaagaggaagaagaagaagaagaaggggaggaggaggaggaggaatag

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_10|263_aa
MQRHEATSRFAPNGKKEEGCSEHQVLLEKAGREYLALWTMSRQRPADLYEEGGGGGGEGE
DNADSKETICRPSGRKSSKMQAFRLRLNLETRIITNRPMLPYAKHFGLPGHPSSSMWALQ
SHLMRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHALFLGIHGGKMCLSC
VKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQ
PVSLTNMPDEGVMVTKFYFQEDE

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_10|792_bp
atgcagagacatgaagctacaagcaggttcgctcccaacggcaaaaaggaggaggggtgt
tcagaacatcaggtgcttctagagaaagcagggagagagtatctggccttgtggacaatg
tcacggcagaggccagctgacttgtatgaagaaggaggtggaggaggaggagaaggtgaa
gacaatgctgactcaaaggagacgatctgccgaccctctgggagaaaatccagcaagatg
caagccttcagactgaggctaaatctagaaactaggataatcacaaacaggccaatgctg
ccatatgcaaagcactttggtttgcctggccacccctcgtcgagcatgtgggctcttcag
agccacctgatgagaatctgggatgttaaccagaagaccttctatctgaggaacaaccaa
ctagttgctggatacttgcaaggaccaaatgtcaatttagaagaaaagatagatgtggta
cccattgagcctcatgctctgttcttgggaatccatggagggaagatgtgcctgtcctgt
gtcaagtctggtgatgagaccagactccagctggaggcagttaacatcactgacctgagc
gagaacagaaagcaggacaagcgcttcgccttcatccgctcagacagtggccccaccacc
agttttgagtctgccgcctgccccggttggttcctctgcacagcgatggaagctgaccag
cccgtcagcctcaccaatatgcctgacgaaggcgtcatggtcaccaaattctacttccag
gaggacgagtag

>gi568815596f:112960851_113162674|GENSCAN_predicted_peptide_11|117_aa
XLLLLASQRGLEPGSNSAAGVARGERAQADSFSGDSVPLPSQSPPLGTLTLSDSRSAGAR
RRGESAARHTVTVEGGDGRGIKNISTTHALPCQLLPFYIQERENSEMLDDLLNVIGS

>gi568815596f:112960851_113162674|GENSCAN_predicted_CDS_11|354_bp
nggctcctcctgctcgccagccagcggggcttggagccaggatccaacagcgcggctgga
gtcgcccgcggcgagagagcccaggctgactccttcagtggagacagcgtccccttgccg
tcccagtctccgccgctcgggaccctaaccctcagcgacagccgctccgcaggtgctcgc
cggcgtggcgagagcgctgcacggcacacggtcaccgtcgagggcggcgacggccggggg
attaaaaatatatcaacgacacatgccctgccctgccagctacttccattttatatacaa
gaaagagaaaactcagagatgttggatgacctcctcaacgtcataggatcttag