GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:18:31

Sequence gi568815587r:60072161_60281727 : 209567 bp : 38.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   5834   6259  426  1  0   70   41   380 0.982  27.54
 1.02 PlyA +   6659   6664    6                               1.05

 2.00 Prom +  16470  16509   40                              -6.25
 2.01 Init +  16606  16661   56  0  2   77   96    31 0.961   3.61
 2.02 Intr +  17532  17661  130  0  1   86   84    63 0.859   5.48
 2.03 Intr +  21240  21398  159  2  0   72   40    96 0.820   2.46
 2.04 Intr +  21804  21902   99  2  0   74   71    68 0.836   3.09
 2.05 Term +  23398  23496   99  0  0   98   48    47 0.845  -1.15
 2.06 PlyA +  24260  24265    6                               1.05

 3.03 PlyA -  25652  25647    6                               1.05
 3.02 Term -  30751  30341  411  1  0   65   48   193 0.796   7.26
 3.01 Init -  37096  37085   12  1  0   66  108     0 0.207  -0.04
 3.00 Prom -  40631  40592   40                              -5.75

 4.00 Prom +  42653  42692   40                              -3.55
 4.01 Init +  46833  47072  240  2  0   46   52   155 0.222   5.62
 4.02 Intr +  49873  49928   56  0  2   92  113    18 0.661   1.56
 4.03 Intr +  52960  53054   95  1  2  102   36    65 0.711   1.39
 4.04 Term +  53180  53334  155  0  2   58   55   100 0.389   0.80
 4.05 PlyA +  53524  53529    6                               1.05

 5.00 Prom +  57203  57242   40                              -3.35
 5.01 Sngl +  62105  62611  507  1  0   50   39   293 0.171  16.39
 5.02 PlyA +  63030  63035    6                               1.05

 6.18 PlyA -  63086  63081    6                               1.05
 6.17 Term -  72406  72318   89  2  2   94   47    73 0.432   0.64
 6.16 Intr -  72907  72840   68  0  2   56   86    54 0.237  -0.37
 6.15 Intr -  82404  81456  949  1  1   45   53   239 0.001   5.35
 6.14 Intr -  89346  89184  163  0  1   66   84   164 0.714  12.43
 6.13 Intr -  97036  96908  129  1  0   43   69    95 0.081   3.07
 6.12 Intr - 103451 103242  210  2  0   91   87    52 0.134   3.59
 6.11 Intr - 105255 105152  104  1  2   44   44    75 0.079  -2.33
 6.10 Intr - 106156 106100   57  2  0   92   97    15 0.411   0.74
 6.09 Intr - 107805 107671  135  1  0  121   59    25 0.661   2.52
 6.08 Intr - 109581 109339  243  1  0   57   72   161 0.026   7.95
 6.07 Intr - 112245 112160   86  2  2   36   80    79 0.001   0.44
 6.06 Intr - 113939 113835  105  1  0   91   85    57 0.001   4.11
 6.05 Intr - 132798 132730   69  2  0   94   84    55 0.075   3.08
 6.04 Intr - 133606 133554   53  1  2   88   44    42 0.043  -3.41
 6.03 Intr - 140972 140814  159  2  0  103  101    70 0.658   9.06
 6.02 Intr - 143917 143891   27  1  0   92   87    40 0.500   1.69
 6.01 Init - 145283 145128  156  2  0   67  105    16 0.373   1.19
 6.00 Prom - 146746 146707   40                              -9.55

 7.00 Prom + 147113 147152   40                              -9.95
 7.01 Init + 147879 148189  311  2  2   69  107   212 0.877  18.03
 7.02 Intr + 148268 148466  199  2  1   18   91   107 0.775   2.43
 7.03 Intr + 149254 149435  182  0  2  109    5   147 0.477   6.24
 7.04 Term + 149817 150381  565  0  1    8   45   326 0.487  13.18
 7.05 PlyA + 151516 151521    6                               1.05

 8.04 PlyA - 151964 151959    6                               1.05
 8.03 Term - 161320 161084  237  1  0   53   36   200 0.623   6.48
 8.02 Intr - 162095 161957  139  1  1   53   81    55 0.700   0.85
 8.01 Init - 163845 163751   95  0  2   42   64    91 0.689   2.00
 8.00 Prom - 177104 177065   40                              -1.55

 9.03 PlyA - 177863 177858    6                               1.05
 9.02 Term - 186845 186402  444  2  0   83   41   153 0.216   4.35
 9.01 Init - 196952 196890   63  2  0   68   86    45 0.575   3.50
 9.00 Prom - 197853 197814   40                              -2.25


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  13726  13373  354  1  0   44   41   221 0.951   8.80
S.002 Sngl +  82821  83501  681  2  0   42   28   301 0.918  15.43
S.003 Init - 109567 109339  229  1  1   82   72   145 0.847  10.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_1|141_aa
MLHFNNNNNNNNNNNNNNNKETTIFTWPEAAAGYDTKGILDQSQQAYQEACEITKKEMQP
TDPIRLGMALNFSVFYYELLNSPEKSHSLVKAAFDEALAELDTLSEESYKDRLLMQLLRD
NLTLWTLDTQGDETEARGRKS

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_1|426_bp
atgctccatttcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaa
gagactactatttttacttggcctgaggctgctgctggttatgacacaaaagggatccta
gatcagtcacaacaagcataccaagaagcttgtgaaatcaccaaaaaggaaatgcaacca
acagatcctatcagattgggtatggctctaaacttctctgtcttctattatgagcttctg
aactccccagagaaatctcattcacttgtaaaggcagcttttgatgaagcccttgctgaa
cttgatacattaagtgaagagtcatacaaagatcgcctgctaatgcagttactgagagac
aacttgacactgtggacattggatactcaaggagatgaaactgaagcaagaggaagaaaa
agttaa

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_2|180_aa
MDTESNRRANLALPQEPSSVPAFEVLEISPQEVSSGRLLKSASSPPLHTWLTVLKKEQEF
LGVRGSLGANTASSIAGGTGITILIINLKKSLAYIHIHSCQKFFETKCFMASFSTEIVVM
MLFLTILGLGSAVSLTICGAGEELKGNKVPEDRVYEELNIYSATYSELEDPGEMSPPIDL

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_2|543_bp
atggacacagaaagtaataggagagcaaatcttgctctcccacaggagccttccagtgtg
cctgcatttgaagtcttggaaatatctccccaggaagtatcttcaggcagactattgaag
tcggcctcatccccaccactgcatacatggctgacagttttgaaaaaagagcaggagttc
ctgggggtgagaggaagcctgggagcaaacactgccagcagcatagctgggggaacggga
attaccatcctgatcatcaacctgaagaagagcttggcctatatccacatccacagttgc
cagaaattttttgagaccaagtgctttatggcttccttttccactgaaattgtagtgatg
atgctgtttctcaccattctgggacttggtagtgctgtgtcactcacaatctgtggagct
ggggaagaactcaaaggaaacaaggttccagaggatcgtgtttatgaagaattaaacata
tattcagctacttacagtgagttggaagacccaggggaaatgtctcctcccattgattta
taa

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_3|140_aa
MEIQVIKASIIGQYCIARERKEFTHPVGRLSCLRQKLYNGTTETVTSWSSNHTERNPFSK
FPKLRTVWTHPESHRDWTAPTGLYWICGHRAFAKLPDESAGSCVIGTIKPSFFLLPIRTG
ELLSFPVYASREKKSIAIEN

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_3|423_bp
atggaaattcaagtcataaaagcctcaattattggacaatattgcatagctagagaaaga
aaagaattcactcaccccgtaggacgacttagttgtctaagacagaaactgtataatggt
accacagaaacagtcacttcgtggagttcaaatcacacagagagaaatccatttagtaaa
ttcccaaagttgcgaaccgtttggacccatccagagtcccaccgggactggacagccccc
actggattatactggatatgtgggcatagagcttttgccaaattacctgacgagtcggca
ggtagttgtgttattggcactattaaaccatctttcttcttactgcccataaggacaggt
gaactcctgagcttccctgtctatgcttcccgcgaaaagaaaagcatagctatagaaaat
tga

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_4|181_aa
MKENLLGELTYMITRAACKLRSQEASPGPKISEVGKLIMRFQSLAEGLRAPGKSLVLSLR
IQKLKNLESDVRGQEVSNKRMGPPSCRKTNMAPTDSTLRVFEQPSPLAMQPGKKPVSGIL
HSSVAQSGSEETQHIDFCDQTCGDFSPPKRQAIISGVNTSWLSFNSVETSSKLEIISDSM
V

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_4|546_bp
atgaaggaaaatttattaggagaattgacttacatgatcacaagggcagcctgcaagctg
aggagccaggaagccagtccgggtcccaaaatctcagaagtagggaagctgataatgcga
tttcagtctttggccgaaggcctgcgagcccctggcaaatcactagtgttaagtctaaga
atccaaaaactgaagaacttggagtctgatgttcgagggcaggaagtatccaacaaaaga
atgggaccacctagttgcaggaaaacaaacatggctcccactgattctacattacgggtc
tttgagcagcccagtcccctagccatgcagccaggcaagaaacctgtgtctggcatactc
cattcatccgtcgctcagtcagggtctgaggagacacaacatatagacttctgcgaccaa
acgtgtggggatttctccccaccaaaaaggcaagcaatcatttctggagtgaacaccagc
tggctgtccttcaattctgttgagacatcatctaaactggagataatatcagattccatg
gtttga

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_5|168_aa
MVLGLQVHRSQELRLYRNAWMSRQRGVAGLEPSWRTSARAMWKGNVGYEPPHRVPTGALP
NGAVRRRPPSSRLQNGRCTDSLHCMPGKAADTQRQPMKAARRVAIHCKATEAELLKAMGA
HFLHQHDLDVRHRVKGDHFGTLRFNVYAVGFQTCMRPAALLFWTVSPM

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_5|507_bp
atggtgttgggtctgcaagtgcacagaagtcaagaattgagattgtatagaaatgcctgg
atgtccaggcagaggggtgttgcagggctggagccatcatggagaacctctgctagggca
atgtggaagggaaatgtggggtatgagcccccacacagagtccccactggagcactgcct
aatggagctgtgagaagacggccaccatcctccagactccagaatggtagatgcactgac
agcttgcactgtatgcctggaaaagctgcagacactcaacgccagcccatgaaagcagcc
aggagggtggccatacactgcaaagccacagaggcagagcttctcaaggccatgggagcc
cacttcttgcatcagcatgacctagatgtgagacatagagtcaaaggagatcattttgga
actttaaggtttaatgtctatgctgttggatttcagacttgcatgaggcctgcagccctt
ttgttttggacagtttctcccatgtag

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_6|933_aa
MGKLFFLAKKRLLRVYKLSVPSFIKVLPHIPIPSCRVPFFFNQCSRFNSRHLYKYQYQEP
AVGGSLGKNITSSVLAISGILINAISLTFYSFRYHYCNHDQLSSNCYMTMSILMMQYDGK
RLNVDVDSTVWCSGDGQYLEKVYYDILSSWLRIERGLLCTALMRHSTGAIAYLGVLSGSA
SLKLAGVPLRCCEGDKDAGHPLETQTALCERGRGARSLVGNTIMTSQPVPNETIIVLPSN
VINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGVNLIQNVLERGWGKCQEMIYVLGLDICH
YPDLVWHDGIELGDHFGICFLLSKFYPSDFYTVELCLPIHRTLFFYHLWLSINRHREKVN
QAFGVDVGDYVRECHTMQLHRDSIWKLWLQKSPKASKEVHSSLVGSILSALSALVGFIIL
SVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKASLAVSHVAPACVVVP
DGSCAARMGLGGNMGGGGQVSCEHGEGTEVPQYLDIRGRCSQGKDHKLSLERDHLTTKPV
GGLDLALTATEGFEAFSEKAAPGPREKMAILPKVIDRVDAIPIKLPMPFFTELEKTTLKF
IWNQKRARIAKSILSQKNKPGGIMLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEI
TPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDL
NIRPKTIKTLEENLGITIQGIGMGKDFMSKTPKAMATEAKIDKWDLIKLKSFCTAKETTI
RVNRQPTKWEKIFTTYSSDKGLISRIYNELKQICKKKTNNPIKKWAKDMNRHFSKEDIYA
AKRHMKKCSPSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRKQEEKKEASTYFKCLIQK
LSYEEYLLMDKHSFVFLFYKSCEYSDVDGNMFA

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_6|2802_bp
atggggaagctgttttttctggcaaaaaaaaggctcctgagagtttacaagctcagtgtc
cccagcttcatcaaggttctaccgcacatccccattccaagttgcagggtcccattcttt
ttcaatcaatgctctcgctttaacagtagacacctgtataagtaccagtaccaagagcca
gctgttggaggtagtctaggaaagaatatcaccagttcagtcttggctatatcagggatc
ttaatcaatgcaataagcttgacgttttattcattccgttaccattactgtaaccacgat
cagttgtcaagtaattgttacatgactatgtccattttaatgatgcaatatgatggaaag
agactaaatgttgatgtcgacagtactgtatggtgctccggagatggacagtatctggaa
aaagtctattatgacattctatcttcttggttgaggattgaaaggggcctgctgtgcact
gctctgatgaggcattccactggggcaattgcctacctgggagtgctctcaggatctgct
tcactcaagctggctggagtccccctcagatgctgtgagggtgacaaagatgcagggcac
ccactggaaacacagacggcactctgcgaaagaggaaggggcgccaggagcttggttggc
aacaccatcatgacatcacaacctgttcccaatgagaccatcatagtgctcccatcaaat
gtcatcaacttctcccaagcagagaaacccgaacccaccaaccaggggcaggatagcctg
aagaaacatctacacgcagaaatcaaagttattggggtaaatctaattcagaacgtgttg
gagaggggttgggggaagtgccaagagatgatatatgtcttgggactggacatctgtcac
tatccagatcttgtgtggcatgatggtattgagcttggggatcattttggcatctgcttc
cttctctccaaattttacccaagtgacttctacactgttgaactctgcttacccattcat
aggaccctttttttttatcatctctggctctctatcaatcgccacagagaaaaggttaac
caagcttttggggttgatgttggagattatgtgagagaatgtcataccatgcaattgcac
cgagactcaatttggaagctctggctacaaaaatctcccaaagccagcaaggaagtgcat
agcagcctggttggaagcattctgagtgctctgtctgccctggtgggtttcattatcctg
tctgtcaaacaggccaccttaaatcctgcctcactgcagtgtgagttggacaaaaataat
ataccaacaagaagttatgtttcttacttttatcatgattcactttataccacggactgc
tatacagccaaagccagtctggctgtcagccatgtggccccagcatgtgttgtggtacct
gatggtagctgtgctgctaggatgggccttggtggaaacatgggtggtggtggacaggtc
tcctgtgagcatggagaaggcactgaagtacctcaatacctggacatcagaggcagatgc
agtcaagggaaggatcataaactttctttggaaagagaccatcttactaccaagccagtc
gggggcttggatcttgccctaacagcaactgaaggatttgaggctttttctgaaaaggca
gccccaggtcctagggagaaaatggccatactgcccaaggtaattgatagagtcgatgcc
atccccatcaagctaccaatgcctttcttcacagaactggaaaaaactactttaaagttc
atatggaaccaaaaaagagcccgaattgccaagtcaatcctaagccaaaagaacaaacct
ggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagca
tggtactggtaccaaaacagagatatagatcaatggaacagaacggagccctcagaaata
acgccgcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatgggga
aaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctg
aaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagactta
aacattagacctaaaaccataaaaaccttagaagaaaacctaggcattaccattcagggc
ataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacagaagccaaa
attgacaaatgggatctcattaaactaaagagcttctgcacagcaaaagaaactaccatc
agagtgaacaggcaacctacaaaatgggagaaaattttcacgacctactcatctgacaaa
gggctaatatccagaatctacaatgaactcaaacaaatttgcaagaaaaaaacaaacaac
cccatcaaaaagtgggcaaaggacatgaacagacacttctcaaaagaagacatttatgca
gccaaaagacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaa
accacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaac
aacaggaaacaggaagagaagaaagaagcatccacttattttaagtgtttaattcagaaa
ttgtcctatgaagaatatctcctgatggataaacattcttttgtcttccttttctacaaa
tcctgtgagtactcggatgtagatggaaacatgtttgcctga

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_7|418_aa
MVEKAKWKPLELPLPRKAVNQQQYPIPEGIADISATIKDLKYARVMIPTTSPFNSPIWPV
QKTDGSWRMTVDYHELNQVVTPVAVAVPDVVSLLEQINPSSGTCWQDQQCTFTVLPQGYI
NSSLALCHDLVQGDLDHFSLPQNITLVHYIDAIILMGSSEQEVASTLDLLPALMVSWGVP
QDQLTEEEKTRALFTDGSARYAGTTSKWSAAALQPLPRTSLKDSGEGKSSQDGGYAWAQQ
HGLPFTDLAMATAEHLICQQQRPALSPQYSTIPRNDQPATWWQVDYIRPLPSRKGQRFFL
TRIDTYFGYGFAYPAHNASGKTTIQELMECLNHCHGIPHSIASDQGTHLLAKEMRQWAHS
HGIHWSYHVSHHPEAAGLIEWWNVLLKSQLQHQPGDNTFQGWGNVLQKAVHALNQRLI

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_7|1257_bp
atggtggaaaaggccaaatggaagccattagagctgcctctacctagaaaagcagtaaat
caacaacaatatcccatccctgaagggattgcagacattagtgccaccatcaaggactta
aaatatgcaagggtgatgattcccaccacatccccattcaactctcccatttggccagtg
cagaagacagatggatcttggagaatgacagtggattatcatgagcttaaccaagtagtg
actccagttgcagttgctgtaccagatgtggtttcattgcttgagcaaattaacccatct
tctggtacctgctggcaagaccagcaatgtacctttactgtcctacctcaggggtatatc
aactcttctctggctttgtgtcatgaccttgttcagggagatcttgatcacttttccctt
ccacaaaatatcacactggtccattatattgatgccattatactgatgggatccagtgag
caagaagtagcaagcacactggacttattgcctgcactgatggtctcatggggagttccc
caggatcaattaacagaggaagagaagacaagggccctgtttacagatggctctgcacga
tatgcaggcaccacctcaaagtggtcagctgcagcactacagccccttcctaggacatcc
ctgaaggacagcggtgaaggaaaatcgtcccaggatggaggatatgcatgggctcagcaa
catggacttccattcactgacctggctatggccactgctgagcacctaatttgccagcag
caaagaccagcactgagccctcaatatagcaccattcctcggaatgatcagccagctact
tggtggcaagttgattatattagacctcttccatcacggaaagggcagcggtttttcctc
accagaatagacacttactttggatatgggtttgcctatcctgcacacaatgcttctggc
aagactacaatccaagaactcatggaatgccttaaccactgtcatggtatcccacatagc
attgcctctgaccaaggcactcacttgttggctaaagaaatgcggcagtgggctcattct
catggaattcactggtcttaccatgtttcccatcatcctgaagcagctggattgatagaa
tggtggaatgtccttttgaagtcacaattacaacatcaaccaggtgacaatacttttcag
ggctggggcaatgttctccagaaggctgtgcatgctctgaatcagcgtctaatataa

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_8|156_aa
MFEQLQIHMQKNEVGHFLTPNKTAQSGAKTKIIKSKVLSPESSEADMDEIQGMTYLEANV
SSCEPVKSKPVICFQNIMVTHKAKAVTLKHTSVTQAHGAGMELRLILGSVHNIIKAPGKE
GCFGGLSSGEQVTVEILVPETIGHSSNSNPGEWSAT

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_8|471_bp
atgtttgaacaacttcagattcacatgcaaaagaatgaagttggacactttcttacacca
aacaaaacagctcaaagtggagcaaaaaccaaaatcatcaagtctaaagttctaagtcca
gagtcatcagaagcagatatggatgagattcaaggtatgacttatctggaggcaaatgtt
tccagctgtgagcctgtgaaatcaaaaccagtgatttgtttccaaaatataatggttacc
cacaaagctaaggctgtaactctaaagcacacctcagtaactcaagcccatggagcaggg
atggaattgagactgattctggggtcagtgcacaacatcatcaaggctccagggaaagag
gggtgctttggaggcttgagctctggggagcaggttactgttgaaattttggttccagag
acaatcgggcatagcagcaattccaaccctggggaatggagtgccacatag

>gi568815587r:60072161_60281727|GENSCAN_predicted_peptide_9|168_aa
MDTKKGKTDTGSYWRVEGEKRCPENSHHQYSRAHAQARPPKLPGICHGVMGHELHTVSLL
EKALPFCYIDCLFLVGSDEGTAQQGLDTLLIHMQQPSWAINTDKIKRPNNIQMKLIKLLG
IIQKAEKPLIAKMIVKILNFSVPPHQKPQKKPQQLVDLFGYWYHSYNT

>gi568815587r:60072161_60281727|GENSCAN_predicted_CDS_9|507_bp
atggacacaaagaagggaaaaacagacactgggtcctactggagggtagagggtgagaag
aggtgccctgagaacagccaccaccaatacagcagagcacatgcacaggcaaggccacct
aagctcccaggtatctgccatggagtgatgggccatgagttacacacagtctcactcctg
gagaaagctctgcccttctgctatattgattgtctcttcctggtgggctcagatgaaggg
actgcccaacaaggactagacaccctgttgatccacatgcagcaacccagctgggccatt
aacacagacaagataaaaagacctaataatatccaaatgaaactaataaaactcctgggc
ataattcagaaagcagaaaagcctctcattgcaaagatgattgtcaagattttgaacttc
tctgtccctccccaccaaaaaccacaaaaaaaaccccagcaattggtagacctatttggc
tactggtatcactcctacaatacctga