GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:38:16

Sequence gi568815594r:56710142_56921662 : 211521 bp : 44.76% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +    198    473  276  2  0   30   32   226 0.772   6.58
 1.02 PlyA +    486    491    6                               1.05

 2.00 Prom +   1533   1572   40                              -5.66
 2.01 Init +   2111   2240  130  1  1   75   89    18 0.236  -1.08
 2.02 Term +   5053   6242 1190  2  2   18   41   393 0.505  19.51
 2.03 PlyA +   6329   6334    6                               1.05

 3.00 Prom +   6697   6736   40                              -6.56
 3.01 Sngl +   7039   7914  876  0  0   86   50   289 0.521  20.88
 3.02 PlyA +   7960   7965    6                              -0.45

 4.00 Prom +   8145   8184   40                              -2.46
 4.01 Init +   8269   8401  133  0  1   78   47    79 0.217   3.10
 4.02 Term +  28789  28928  140  2  2  -37   42   347 0.817  15.73
 4.03 PlyA +  30050  30055    6                               1.05

 5.05 PlyA -  31601  31596    6                               1.05
 5.04 Term -  49346  49274   73  1  1   96   39    59 0.723  -0.82
 5.03 Intr -  51348  50782  567  2  0   50   93   242 0.117  12.79
 5.02 Intr -  64791  64656  136  1  1   66   26   142 0.286   5.43
 5.01 Init -  65969  65900   70  2  1   77   73    33 0.667   1.91
 5.00 Prom -  75903  75864   40                              -1.26

 6.05 PlyA -  76020  76015    6                               1.05
 6.04 Term -  76830  76824    7  2  1  131   45     0 0.026  -2.66
 6.03 Intr - 101653 101544  110  1  2  100   92    27 0.343   3.38
 6.02 Intr - 110438 110395   44  0  2   99  127   -21 0.727   0.86
 6.01 Init - 111521 111317  205  2  1   80   49   256 0.896  18.30
 6.00 Prom - 129601 129562   40                              -2.16

 7.00 Prom + 171586 171625   40                              -4.96
 7.01 Init + 175175 175320  146  1  2   88   86    84 0.660   7.79
 7.02 Term + 177915 179094 1180  0  1    3   42   478 0.871  25.96
 7.03 PlyA + 179355 179360    6                               1.05

 8.00 Prom + 180726 180765   40                              -2.46
 8.01 Init + 196796 196852   57  1  0   88   64    29 0.532   1.81
 8.02 Intr + 199019 199075   57  1  0   81   62    68 0.612   2.58
 8.03 Intr + 200489 201395  907  1  1   67  110   578 0.576  48.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_1|91_aa
MLKNAESNAELKGLDVDSLVIEYNRVNKAPKMRPWTYRAHGWINPYMSSPCHTEKILTEN
EQVVPRPEKEATQKKKISQKKLKKQKLMAQE

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_1|276_bp
atgcttaaaaatgcagagagtaatgctgaactcaagggtttagatgtagattctctggtc
attgagtataaccgagtaaacaaagcacctaagatgcgcccctggacctacagagctcat
ggttggattaacccatacatgagctccccctgccacacagagaagatccttactgaaaat
gaacaggttgttcctagaccagaaaaggaggctacccagaagaaaaagatatcccagaag
aaactgaagaaacaaaaacttatggcacaggagtaa

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_2|439_aa
MPGCAHGQTLCLLTHPLVLCTWLTLGRHGIQAGSTSQRQPSGPNRSTRQKVNKDIQELNS
ALHQADLIDIYRTLHSKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCKRTEIITNCLSDN
SAIKLELRIEKLTQNLSTTWKLNNLILNDYWVNNKMKAEIKIFFETSENKDTTYKNLWDT
VKAVCRGKFIALTAHKRKQERSKTDTLTSQLKELEKQEQTHSKASRRQEITKIGAELKET
ETQKSLQKINESRSWLFEKINKIDRPLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTT
IREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITDSAIEAIINSLPNKKS
PGPDRFSAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILTPKPGRDTTKKENF
RPISLMNINAKILNKILAN

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_2|1320_bp
atgcctggctgtgcacatggccagaccctgtgcttgctcacacaccccttggtgctctgc
acctggctcacccttggcaggcatgggatccaggctggtagcacaagccaaaggcagcct
tctgggccaaacagatcaacgagacagaaagttaacaaggatatccaggaattgaactca
gctctgcaccaagcagacctaatagacatctacagaactctccactccaaatcaacagaa
tatacattcttctcagcaccacatcacacttattccaaaattgaccacatagttggaagt
aaagcactcctcagcaaatgtaaaagaacagaaattataacaaactgtctctcagacaac
agtgcaatcaaactagaactcaggattgagaaactcactcaaaatctctcaactacatgg
aaactgaacaacctgatcctgaatgactactgggtaaataacaaaatgaaggcagaaata
aagatattctttgaaaccagtgagaacaaagacacaacatacaagaatctctgggacaca
gttaaagcagtgtgtagagggaaatttatagcactaactgcccacaagagaaagcaggaa
agatctaaaactgataccctaacatcacaattaaaagaactagagaagcaagagcaaaca
cattcaaaagctagcagaaggcaagaaataactaagatcggagcagaactgaaggagaca
gagacacaaaaatcccttcaaaaaatcaatgaatccaggagctggctttttgaaaagatc
aacaaaattgatagaccgctagcaagactaataaagaagaaaagagagaagaatcaaata
gacacaataaaaaatgataaaggggatatcaccactgatcccacggaaatacaaactacc
atcagagaatactataaacacctctatgcaaataaactagaaaatctggaagaaatggat
aaattcctggacacatacaccctcccaagactaaaccaggaagaagttgaatccctgaat
agacctataacagactctgcaattgaggcaataattaatagcctaccaaacaaaaaaagt
ccaggaccagacagattctcagccgaattctaccagaggtacaaggaggagctggtacca
ttccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttat
gaggccagcatcatcctgacaccaaagcctggcagagacacaacaaaaaaagagaatttt
agaccaatatccctgatgaacatcaatgcaaaaatcctcaataaaatactggcaaactga

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_3|291_aa
MPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKTILSQKNKAGGITLPDFKL
CYKATVTKTAWYWYQNRDIDQWNRTEPSEIIPHIYNHLIFDKPDKNKKWGKDSLFNKWCW
ENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDTGMGKDFMSK
TPKAMATQAKIDKWDLIKLKNFCTAKETTITVNRQPTEWEKIFAIYPSDKGLNIQNLQRT
QTNLQEKNNPIKKWAKDMNRHFSKEDIYTVNRHMKNAHHHWPSEKCKSKPQ

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_3|876_bp
atgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttc
acagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagccctcattgcc
aagacaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaacta
tgctacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagac
caatggaacagaacagagccctcagaaataataccacacatctacaaccatctgatcttt
gacaaacctgacaaaaacaagaaatgggggaaggattccctatttaataaatggtgctgg
gaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttataca
aaaattaattcaagatggattaaagacttaaatgttcgacctaaaaccataaaaacccta
gaagaaaacctaggcaataccattcaggacacaggcatgggcaaggacttcatgtctaaa
acaccaaaagcaatggcaacacaagccaaaattgacaaatgggatctaattaaactaaag
aacttctgcacagcaaaagaaactaccatcacagtgaacaggcaacctacagaatgggag
aaaatttttgcaatctacccatctgacaaagggcttaatatccagaatctacaaagaact
caaacaaatttacaagaaaaaaacaaccccatcaaaaagtgggcaaaggatatgaacaga
cacttctcaaaagaagacatttatacagtcaacagacacatgaaaaatgctcatcatcac
tggccatcagagaaatgcaaatcaaaaccacaatga

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_4|90_aa
MEYYAAIQKDEFMSFVGTWMKLEAIILSKLSQGQKIKHRMFSLIEGRRKKKEEGEGGGGG
EEEEEDEEEEEEEEEEEEEEEEEEEEEEEI

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_4|273_bp
atggaatactatgcagccatacaaaaggatgagttcatgtcctttgtagggacatggatg
aagctggaagccatcattctcagcaaactatcgcaaggacagaaaatcaaacaccgcatg
ttctcactcatagaaggaagaagaaagaagaaagaagaaggagaaggaggaggtggagga
gaagaagaggaagaagatgaagaagaagaagaggaggaggaggaggaggaagaagaagaa
gaagaggaagaggaagaagaagaagaaatttaa

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_5|281_aa
MEQETDHLVKKIPGSTQELERNIYLVSCEPEVEAHYEDQDDASNDNEKQLTGRRQFDSNI
RYPVATALGRMEADASVDMFSKVLENQLLQTTKLVEEHLDSEIQKLDQMDEDELEHIKEK
RLEALRKAQQQKQEWLSKGHGEYREIPSERDFFQEVKESKKVVCHFYRDSTFRCKILDRF
LAILSEKHLETKFLKLNVEKAPFLCERLHIKVIPILALVKDGKTQDYVVGFTDLGNTDDF
TTETLEWGLSCSDILNYRPYRVLADIAMAFVNCQCAGGSVF

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_5|846_bp
atggagcaagaaactgaccacctcgtgaaaaaaattccgggaagtactcaggaactagaa
aggaacatatacttggtgagctgtgagccagaagtagaagcccattatgaagaccaagat
gatgcatctaatgataatgagaagcagctaactggcagaagacaatttgacagcaacata
cgatatcccgttgctactgcacttggaagaatggaagctgatgcatctgttgacatgttt
tccaaagtcctggagaatcagctgcttcagactaccaaactggtggaagaacatttggat
tctgaaattcaaaaactggatcagatggatgaggatgaattggaacacattaaagaaaag
agactcgaggcactaaggaaagctcaacagcagaaacaagaatggctttccaaaggacat
ggggaatacagagaaatccctagtgaaagagacttttttcaagaagtcaaggagagtaaa
aaagtggtttgccatttctacagagactccacattcaggtgtaaaatactagacagattt
ctggcgatattgtccgagaaacacctcgagaccaaatttttgaagctgaatgtggaaaaa
gcacctttcctttgtgagagactgcatatcaaagtcattcccatactagcactggtaaaa
gatgggaaaacacaagattatgttgttgggtttactgacctaggaaatacagatgacttc
accacagaaactttagaatgggggctcagttgttctgacattcttaattacagaccatat
agggtacttgctgacattgccatggcatttgtaaactgtcagtgcgctggtggcagtgtc
ttttag

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_6|121_aa
MALSVLRLALLLLAVTFAGSARSGPGERGPPEKSGFGSQTGGGPCPAPGGLGDGTRAPVT
GGSPEDLPASLIPQFGLFSKYRTPNCSQYRLPGCPRHFNPVCGSDMSTYANECTLCMKIR
T

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_6|366_bp
atggcgctgtcggtgctgcgcttggcgctgctgctcctggcagttaccttcgcaggtagc
gctcggagcggtcctggcgagcggggacctccggagaaaagcgggtttgggagtcagacc
ggcggcggaccctgccctgctccgggcggcctcggcgacggtacccgcgcgcccgttact
ggcggttccccagaggacctgccagcctctctgatccctcaatttggtctgttttcaaaa
tatagaacgccaaactgctctcagtatagattaccaggatgtcccagacactttaaccct
gtgtgtggcagtgacatgtccacttatgccaatgaatgtactctgtgcatgaaaatcagg
acataa

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_7|441_aa
MGRNQSRKAENSKNQSASFLPKDCSSSPAMEESWTENDFDELTEVGFRRPITGSEIEAII
NTLQTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQTIEKEGLVPNSFYEASIILIPKPVR
DTTEKDNFRPISLMNIDAKILNKILANQIQQHIKKLIQHDQVCFIPGMQGLFNICKSINV
IHDINRTNDKNHMIILIYAEKAFDKIQQPFMLKTLNKLSIDGSYLKIIRAIYDKPAANII
LNGQKLEAFPSKTDTRQGCPFSPLLFNIVLEVLARAIRQEKEIKRIQLGKEEVKLSLFAD
DMVVYLENPIVSAQNLLKLISNFSKVSGYISVQKSQAFLYTNNRQTESQIMSELPFTIAT
KRIKYLGIQLTRDVKDLFRENYKPLLNEIKEDTNKWKNIPCSWIGRINIMKMAILPKVFC
RFNAIPIKLPMTFFTDWKKLL

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_7|1326_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaaccagagcgcctcttttctt
ccaaaggattgcagctcctcgccagcaatggaagaaagctggacagagaatgactttgac
gagttgacagaagtaggcttcagaagaccaataacaggctctgaaattgaggcaataatt
aatactctacaaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggagctggtaccattccttctgaaactattccaaacaatagaaaaagag
ggactcgtccctaactcattttatgaggccagcatcatcctgataccaaagccggtcaga
gacacaacagaaaaagataattttagaccaatatctctgatgaacattgatgcgaaaatc
ctcaacaaaatactggcaaaccaaatccaacagcatatcaaaaagcttatccagcacgat
caagtctgcttcatccctgggatgcaaggcttgttcaacatatgcaaatcaataaacgta
atccatgacataaacagaaccaacgacaaaaatcacatgattatcttaatatatgcagaa
aaggcctttgacaaaattcaacagcccttcatgctaaaaactctcaataaactaagcatt
gatggaagttatctcaaaataataagagctatttatgacaaacctgcagccaatatcata
ctgaatgggcaaaaactggaagcattcccttcaaaaactgacacaagacaaggatgcccc
ttctcaccactcctattcaacatagtgttggaagttctggccagggcaatcaggcaagag
aaagaaataaagcgcattcaattaggaaaagaggaagtcaaattgtccctgtttgcagat
gacatggttgtatatttggaaaaccccatcgtctcagcccaaaatctccttaagctgata
agcaacttcagcaaggtctcaggatacatcagtgtgcaaaaatcacaagcattcctatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgctaca
aagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcagggag
aactacaaacccctgctcaacgaaataaaagaggacacaaacaaatggaagaacattcca
tgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtattttgt
agattcaatgccatccccatcaagctaccaatgactttcttcacagattggaaaaaatta
ctttaa

>gi568815594r:56710142_56921662|GENSCAN_predicted_peptide_8|341_aa
MGSHYASEDRCDLRLTFRKCWRAQEKAQDECRGDSRELNTVMATQVMGQSSGGGGLFTSS
GNIGMALPNDMYDLHDLSKAELAAPQLIMLANVALTGEVNGSCCDYLVGEERQMAELMPV
GDNNFSDSEEGEGLEESADIKGEPHGLENMELRSLELSVVEPQPVFEASGAPDIYSSNKD
LPPETPGAEDKGKSSKTKPFRCKPCQYEAESEEQFVHHIRVHSAKKFFVEESAEKQAKAR
ESGSSTAEEGDFSKGPIRCDRCGYNTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVS
EYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQHVRTHTX

>gi568815594r:56710142_56921662|GENSCAN_predicted_CDS_8|1023_bp
atggggagccactatgcttctgaggacaggtgtgacttacgactgacgtttaggaagtgt
tggagagcgcaggaaaaggctcaggacgagtgtcggggcgactcccgcgagttgaataca
gttatggccacccaggtaatggggcagtcttctggaggaggagggctgtttaccagcagt
ggcaacattggaatggccctgcctaacgacatgtatgacttgcatgacctttccaaagct
gaactggccgcacctcagcttattatgctggcaaatgtggccttaactggggaagtaaat
ggcagctgctgtgattacctggtcggtgaagaaagacagatggcagaactgatgccggtt
ggggataacaacttttcagatagtgaagaaggagaaggacttgaagagtctgctgatata
aaaggtgaacctcatggactggaaaacatggaactgagaagtttggaactcagcgtcgta
gaacctcagcctgtatttgaggcatcaggtgctccagatatttacagttcaaataaagat
cttccccctgaaacacctggagcggaggacaaaggcaagagctcgaagaccaaacccttt
cgctgtaagccatgccaatatgaagcagaatctgaagaacagtttgtgcatcacatcaga
gttcacagtgctaagaaattttttgtggaagagagtgcagagaagcaggcaaaagccagg
gaatctggctcttccactgcagaagagggagatttctccaagggccccattcgctgtgac
cgctgcggctacaatactaatcgatatgatcactatacagcacacctgaaacaccacacc
agagctggggataatgagcgagtctacaagtgtatcatttgcacatacacaacagtgagc
gagtatcactggaggaaacatttaagaaaccattttccaaggaaagtatacacatgtgga
aaatgcaactatttttcagacagaaaaaacaattatgttcagcatgttagaactcataca
gnn