Result of FASTA (ccds) for
pF1KB5399
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5399, 191 aa
1>>>pF1KB5399 191 - 191 aa - 191 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1743+/-0.000991; mu= 14.0987+/- 0.060
mean_var=81.8324+/-16.145, 0's: 0 Z-trim(105.6): 93 B-trim: 4 in 1/50
Lambda= 0.141779
statistics sampled from 8422 (8529) to 8422 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.262), width: 16
Scan time: 1.820
The best scores are: opt bits E(32554)
CCDS1689.1 VSNL1 gene_id:7447|Hs108|chr2 ( 191) 1277 270.7 3.9e-73
CCDS441.1 HPCAL4 gene_id:51440|Hs108|chr1 ( 191) 1181 251.0 3.2e-67
CCDS6292.1 NCALD gene_id:83988|Hs108|chr8 ( 193) 926 198.9 1.6e-51
CCDS1671.1 HPCAL1 gene_id:3241|Hs108|chr2 ( 193) 919 197.5 4.4e-51
CCDS370.1 HPCA gene_id:3208|Hs108|chr1 ( 193) 892 191.9 2e-49
CCDS6932.1 NCS1 gene_id:23413|Hs108|chr9 ( 190) 763 165.5 1.7e-41
CCDS78448.1 NCS1 gene_id:23413|Hs108|chr9 ( 172) 671 146.7 7.5e-36
CCDS11151.1 RCVRN gene_id:5957|Hs108|chr17 ( 200) 615 135.3 2.3e-32
CCDS64313.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 188) 567 125.4 2e-29
CCDS4374.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 216) 567 125.5 2.2e-29
CCDS34285.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 225) 567 125.5 2.3e-29
CCDS34286.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 227) 567 125.5 2.3e-29
CCDS47035.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 188) 554 122.8 1.3e-28
CCDS43215.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 216) 554 122.8 1.4e-28
CCDS43217.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 225) 554 122.9 1.5e-28
CCDS3428.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 229) 554 122.9 1.5e-28
CCDS43216.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 250) 554 122.9 1.6e-28
CCDS7524.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 220) 552 122.4 1.9e-28
CCDS7525.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 225) 552 122.4 1.9e-28
CCDS41562.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 252) 552 122.5 2.1e-28
CCDS7522.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 270) 552 122.5 2.2e-28
CCDS7521.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 285) 552 122.5 2.3e-28
CCDS7523.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 227) 534 118.8 2.5e-27
CCDS33245.1 KCNIP3 gene_id:30818|Hs108|chr2 ( 230) 525 116.9 9e-27
CCDS2013.1 KCNIP3 gene_id:30818|Hs108|chr2 ( 256) 525 117.0 9.7e-27
CCDS4865.1 GUCA1B gene_id:2979|Hs108|chr6 ( 200) 502 112.2 2.1e-25
CCDS4864.1 GUCA1A gene_id:2978|Hs108|chr6 ( 201) 427 96.8 8.8e-21
CCDS64312.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 241) 412 93.8 8.5e-20
CCDS72761.1 HPCAL4 gene_id:51440|Hs108|chr1 ( 119) 402 91.5 2.1e-19
CCDS2954.1 GUCA1C gene_id:9626|Hs108|chr3 ( 209) 340 79.1 2.1e-15
>>CCDS1689.1 VSNL1 gene_id:7447|Hs108|chr2 (191 aa)
initn: 1277 init1: 1277 opt: 1277 Z-score: 1426.5 bits: 270.7 E(32554): 3.9e-73
Smith-Waterman score: 1277; 100.0% identity (100.0% similar) in 191 aa overlap (1-191:1-191)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
130 140 150 160 170 180
190
pF1KB5 IVLLLQCDIQK
:::::::::::
CCDS16 IVLLLQCDIQK
190
>>CCDS441.1 HPCAL4 gene_id:51440|Hs108|chr1 (191 aa)
initn: 1181 init1: 1181 opt: 1181 Z-score: 1320.3 bits: 251.0 E(32554): 3.2e-67
Smith-Waterman score: 1181; 89.5% identity (99.0% similar) in 191 aa overlap (1-191:1-191)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
::: ::::::::.::::..:::.:.:::::::::::::::: ::::::::::.:::::::
CCDS44 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
::::::::::::::::::::::::::::::.::::::::::::::.::::::::.:::.:
CCDS44 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::::::::::::::::::.::.:::::.:::::::.:::..:::::::.:::::::::::
CCDS44 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
130 140 150 160 170 180
190
pF1KB5 IVLLLQCDIQK
::::::::.::
CCDS44 IVLLLQCDMQK
190
>>CCDS6292.1 NCALD gene_id:83988|Hs108|chr8 (193 aa)
initn: 749 init1: 735 opt: 926 Z-score: 1038.4 bits: 198.9 E(32554): 1.6e-51
Smith-Waterman score: 926; 69.7% identity (92.0% similar) in 188 aa overlap (1-188:1-186)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
:::::::: ::::.::..::.:.:::...::::::.:::::.:..:::...: .::::::
CCDS62 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
:::::.:.::::: :::::::::::: :::.::::..::::.:::.::::::.: :...:
CCDS62 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::::..::::::..: ::: :: :::.:..::: .:: :.: ...:.:: ..::::::
CCDS62 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPS
130 140 150 160 170
190
pF1KB5 IVLLLQCDIQK
:: :::::
CCDS62 IVRLLQCDPSSAGQF
180 190
>>CCDS1671.1 HPCAL1 gene_id:3241|Hs108|chr2 (193 aa)
initn: 725 init1: 725 opt: 919 Z-score: 1030.7 bits: 197.5 E(32554): 4.4e-51
Smith-Waterman score: 919; 69.7% identity (91.5% similar) in 188 aa overlap (1-188:1-186)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
:::::::: :::..:: ..:::..:::..::::::::::.:.:...::...:..::::::
CCDS16 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
:::::.:.::::: :::::::::::: :::.::::..::::.:::.::::::.: :.: :
CCDS16 ASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::::..::::::..: ::: :: :::.:.:::: .:: :.: ...:.:: ..::::::
CCDS16 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIRGAKSDPS
130 140 150 160 170
190
pF1KB5 IVLLLQCDIQK
:: :::::
CCDS16 IVRLLQCDPSSASQF
180 190
>>CCDS370.1 HPCA gene_id:3208|Hs108|chr1 (193 aa)
initn: 704 init1: 704 opt: 892 Z-score: 1000.8 bits: 191.9 E(32554): 2e-49
Smith-Waterman score: 892; 68.6% identity (89.4% similar) in 188 aa overlap (1-188:1-186)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
:::::::: ::...:: ..:::.: ::..::::::::::.: ::..::...:..::::::
CCDS37 MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
:::::.:.::::: :.:::::::::: :::.:::: .:::: :::.::::::.: :.: :
CCDS37 ASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::::..::::::..: ::: :: :::.:..::: .:: :.: ...:.:: ..::::::
CCDS37 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPS
130 140 150 160 170
190
pF1KB5 IVLLLQCDIQK
:: :::::
CCDS37 IVRLLQCDPSSASQF
180 190
>>CCDS6932.1 NCS1 gene_id:23413|Hs108|chr9 (190 aa)
initn: 817 init1: 607 opt: 763 Z-score: 858.3 bits: 165.5 E(32554): 1.7e-41
Smith-Waterman score: 763; 58.4% identity (85.4% similar) in 185 aa overlap (1-185:1-183)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
:::.:::: :::.:.:...: :.:.:..::::::.::::::.:. ::..: .:::.::
CCDS69 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
.::: .: .::.: :: :.: ::: :::.::::....:: :::..::::.:: ::: :
CCDS69 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::.:..:::.:::... . .:. :::.:::.::. :::: : ..::.::.:..:.:::
CCDS69 MLDIVDAIYQMVGNTVELPEEEN--TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS
130 140 150 160 170
190
pF1KB5 IVLLLQCDIQK
:: :
CCDS69 IVQALSLYDGLV
180 190
>>CCDS78448.1 NCS1 gene_id:23413|Hs108|chr9 (172 aa)
initn: 710 init1: 500 opt: 671 Z-score: 757.2 bits: 146.7 E(32554): 7.5e-36
Smith-Waterman score: 671; 58.0% identity (84.6% similar) in 162 aa overlap (24-185:6-165)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
:.:..::::::.::::::.:. ::..: .:::.::
CCDS78 MATITEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD
10 20 30 40
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
.::: .: .::.: :: :.: ::: :::.::::....:: :::..::::.:: ::: :
CCDS78 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
::.:..:::.:::... . .:. :::.:::.::. :::: : ..::.::.:..:.:::
CCDS78 MLDIVDAIYQMVGNTVELPEEEN--TPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS
110 120 130 140 150 160
190
pF1KB5 IVLLLQCDIQK
:: :
CCDS78 IVQALSLYDGLV
170
>>CCDS11151.1 RCVRN gene_id:5957|Hs108|chr17 (200 aa)
initn: 583 init1: 583 opt: 615 Z-score: 694.4 bits: 135.3 E(32554): 2.3e-32
Smith-Waterman score: 615; 45.8% identity (79.2% similar) in 192 aa overlap (1-191:1-192)
10 20 30 40 50
pF1KB5 MGKQNS-KLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYG
::...: :. :..:.: .:.:.:.:: .::..::::::.::.. ..::..:.::::
CCDS11 MGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 DASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRV
: . .:::.::.::.: :::.::.:.. :: .:. :. .:::.:::..::.::.: :..
CCDS11 DPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 EMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDP
:.:::. ::.::. . . .: :::.:..::.. . :: ::..: :: :.. ..
CCDS11 EVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANK
130 140 150 160 170 180
180 190
pF1KB5 SIVLLLQCDIQK
:. :.: . ::
CCDS11 EILRLIQFEPQKVKEKMKNA
190 200
>>CCDS64313.1 KCNIP1 gene_id:30820|Hs108|chr5 (188 aa)
initn: 567 init1: 437 opt: 567 Z-score: 641.7 bits: 125.4 E(32554): 2e-29
Smith-Waterman score: 567; 46.3% identity (76.8% similar) in 177 aa overlap (10-186:8-182)
10 20 30 40 50 60
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
:: .:.: .:.:...::. :.:: ..:::: .: . :.:.:..:::.::
CCDS64 MTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
:: .:.. : .:: . :.. :..:. :::: ::. ..:: :.::.::.. :: :.. :
CCDS64 ASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
:..:..::: :.: . ..:: ::.:.:: .:.::::::: .::::: :. . : .
CCDS64 MMDIVKAIYDMMGKYTYPVLKED--TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDN
120 130 140 150 160 170
190
pF1KB5 IVLLLQCDIQK
:. ::
CCDS64 IMRSLQLFQNVM
180
>>CCDS4374.1 KCNIP1 gene_id:30820|Hs108|chr5 (216 aa)
initn: 567 init1: 437 opt: 567 Z-score: 640.9 bits: 125.5 E(32554): 2.2e-29
Smith-Waterman score: 567; 46.3% identity (76.8% similar) in 177 aa overlap (10-186:36-210)
10 20 30
pF1KB5 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCP
:: .:.: .:.:...::. :.:: ..::
CCDS43 GTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECP
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 SGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQ
:: .: . :.:.:..:::.:::: .:.. : .:: . :.. :..:. :::: ::. ..
CCDS43 SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 KLNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMD
:: :.::.::.. :: :.. ::..:..::: :.: . ..:: ::.:.:: .:.:::
CCDS43 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED--TPRQHVDVFFQKMD
130 140 150 160 170 180
160 170 180 190
pF1KB5 KNKDDQITLDEFKEAAKSDPSIVLLLQCDIQK
:::: .::::: :. . : .:. ::
CCDS43 KNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVM
190 200 210
191 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:33:32 2016 done: Sat Nov 5 12:33:33 2016
Total Scan time: 1.820 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]