GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:23:02

Sequence gi568815595f:148727824_148959999 : 232176 bp : 37.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    306    368   63  2  0   73   83    23 0.302   1.50
 1.02 Intr +   2237   2414  178  1  1  -23   84   136 0.351   0.67
 1.03 Intr +   9710   9775   66  0  0   74   78    56 0.509   1.16
 1.04 Intr +  13166  14244 1079  0  2   92   75   380 0.602  26.05
 1.05 Intr +  19161  19269  109  2  1   85   79   101 0.576   7.84
 1.06 Term +  20614  20765  152  2  2   32   42   191 0.577   5.99
 1.07 PlyA +  22056  22061    6                               1.05

 2.05 PlyA -  22177  22172    6                               1.05
 2.04 Term -  24135  23957  179  1  2   60   49   119 0.153   2.07
 2.03 Intr -  28241  28181   61  2  1   93   76    34 0.727   0.09
 2.02 Intr -  29584  29472  113  2  2   54   72   137 0.979   7.88
 2.01 Init -  32296  32242   55  1  1   59   97    16 0.977   1.10
 2.00 Prom -  36548  36509   40                              -7.95

 3.04 PlyA -  38132  38127    6                               1.05
 3.03 Term -  38793  38462  332  1  2   89   49   256 0.958  15.63
 3.02 Intr -  55634  54981  654  0  0   56   80   260 0.310  12.91
 3.01 Init -  57644  57434  211  2  1   81    0   220 0.231  11.49
 3.00 Prom -  66295  66256   40                              -4.65

 4.00 Prom +  74539  74578   40                              -3.65
 4.01 Init +  81271  81343   73  0  1   61   97    18 0.247   1.28
 4.02 Term +  83025  83260  236  1  2    6   48   235 0.722   6.80
 4.03 PlyA +  87038  87043    6                               1.05

 5.00 Prom +  95755  95794   40                              -5.35
 5.01 Init + 100001 100071   71  1  2   64  110    79 0.998   8.35
 5.02 Intr + 100179 100254   76  0  1   58  111    87 0.933   6.60
 5.03 Intr + 106675 106799  125  0  2   55  108    78 0.912   4.96
 5.04 Intr + 111752 111938  187  2  1   45   31   100 0.510  -1.23
 5.05 Intr + 112693 112962  270  0  0   42   72   207 0.965  11.32
 5.06 Intr + 114000 114101  102  2  0   83   78    32 0.645   1.15
 5.07 Intr + 116655 116765  111  2  0   37   71   151 0.989   7.96
 5.08 Intr + 116854 116944   91  0  1    1  103    72 0.931  -1.35
 5.09 Intr + 117601 117803  203  2  2   57  111   243 0.970  21.58
 5.10 Intr + 124480 124545   66  0  0   91   75    31 0.442   0.28
 5.11 Intr + 128833 128965  133  0  1   51  113    44 0.762   2.50
 5.12 Term + 131992 132179  188  2  2   59   33   209 0.993   9.17
 5.13 PlyA + 132336 132341    6                               1.05

 6.00 Prom + 134882 134921   40                              -8.55
 6.01 Init + 137485 137552   68  0  2   88   99    81 0.999  10.05
 6.02 Intr + 137650 137725   76  1  1   61   99   106 0.997   7.60
 6.03 Intr + 141092 141216  125  1  2   72   80    64 0.657   2.46
 6.04 Intr + 150618 150720  103  0  1   67   87    82 0.806   5.26
 6.05 Intr + 150824 150925  102  1  0   54   93    67 0.852   3.25
 6.06 Intr + 151965 152066  102  2  0   30  111    51 0.669   1.05
 6.07 Intr + 153699 153809  111  2  0   83   79    55 0.920   3.76
 6.08 Intr + 154682 154772   91  1  1   46   74    49 0.984  -2.05
 6.09 Intr + 155790 155992  203  1  2   86   84   196 0.983  17.08
 6.10 Intr + 158270 158354   85  1  1  112   78   138 0.999  13.67
 6.11 Term + 168697 168884  188  2  2  108   43   131 0.948   7.27
 6.12 PlyA + 169234 169239    6                               1.05

 7.00 Prom + 175331 175370   40                              -7.25
 7.01 Init + 180214 180365  152  0  2   92   38   110 0.221   5.96
 7.02 Intr + 191525 191642  118  2  1   31   82    41 0.009  -2.65
 7.03 Intr + 204304 204384   81  0  0   91   93     9 0.114   0.62
 7.04 Intr + 212946 213110  165  2  0  125   96    71 0.579  10.84
 7.05 Term + 213161 213310  150  1  0   90   42   134 0.863   5.93
 7.06 PlyA + 215106 215111    6                               1.05

 8.02 PlyA - 216208 216203    6                               1.05
 8.01 Term - 226028 225917  112  1  1   78   44   151 0.867   6.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_1|548_aa
MPKSKNNNNRALKHYLQNVKNHLQIHDLIRCFQQCFAPNWTHACYFIILIVNIIIIIIIF
QMKKMNHKSTDSPKAPQLRGDLNCVEEENCDFIPLASWTPTHGVFDIVFATNSTQVIKMI
LNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTV
ASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCL
SIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAF
HYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEIQKNKPRNDDIFKII
MAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFY
GFLGKKFKRYFLQLLKYIPPKAKSHSNLSTKMSTLSYRPSDNATVNWSRLEVDQSQFFMR
IFQTGADEELAPVLAFLRHRKQLVLLNRDKPPRAHHREESIMSADATADLLRISQRHVTQ
EPTDADSS

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_1|1647_bp
atgccaaaaagtaaaaataataataatagagccttgaaacattacttacagaatgtcaaa
aaccacctccagatccatgatctcattcggtgtttccaacaatgttttgcaccaaactgg
acacatgcttgctacttcatcatcctcatcgtgaacattattattattatcatcattttc
cagatgaagaaaatgaatcacaagtcaactgacagtccaaaggctccacagctcagagga
gacttaaactgtgtagaggaggagaactgtgactttattccccttgcatcctggacaccc
acacatggtgtatttgatatagtgtttgcaacaaattcgacccaggtgatcaaaatgatt
ctcaactcttctactgaagatggtattaaaagaatccaagatgattgtcccaaagctgga
aggcataattacatatttgtcatgattcctactttatacagtatcatctttgtggtggga
atatttggaaacagcttggtggtgatagtcatttacttttatatgaagctgaagactgtg
gccagtgtttttcttttgaatttagcactggctgacttatgctttttactgactttgcca
ctatgggctgtctacacagctatggaataccgctggccctttggcaattacctatgtaag
attgcttcagccagcgtcagtttcaacctgtacgctagtgtgtttctactcacgtgtctc
agcattgatcgatacctggctattgttcacccaatgaagtcccgccttcgacgcacaatg
cttgtagccaaagtcacctgcatcatcatttggctgctggcaggcttggccagtttgcca
gctataatccatcgaaatgtatttttcattgagaacaccaatattacagtttgtgctttc
cattatgagtcccaaaattcaaccctcccgatagggctgggcctgaccaaaaatatactg
ggtttcctgtttccttttctgatcattcttacaagttatactcttatttggaaggcccta
aagaaggcttatgaaattcagaagaacaaaccaagaaatgatgatatttttaagataatt
atggcaattgtgcttttctttttcttttcctggattccccaccaaatattcacttttctg
gatgtattgattcaactaggcatcatacgtgactgtagaattgcagatattgtggacacg
gccatgcctatcaccatttgtatagcttattttaacaattgcctgaatcctcttttttat
ggctttctggggaaaaaatttaaaagatattttctccagcttctaaaatatattccccca
aaagccaaatcccactcaaacctttcaacaaaaatgagcacgctttcctaccgcccctca
gataatgccacagttaattggtccaggcttgaagtggaccaatcacagtttttcatgagg
atttttcaaacaggcgctgatgaagagctggccccagtgttggcatttctgagacataga
aagcagctggtgttactcaacagagataagcctcctagagctcaccacagagaggagagc
atcatgtctgcagatgccacagcagatctgctgagaatcagccagcgccatgtgacacaa
gaacccacagatgcggattcgtcctga

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_2|135_aa
MYGGYVCVEEGQQWEVVFVWPTNQQQENLLAACKKYTLLGSVLDLLAESAASQDSQCWYS
PTSGKQETEEVQNKGRLLDTLTSPSFIELVSCSWVLRRTFREQPTKNQAEIKNDAYKRSL
CDSMSLSTVQREKFP

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_2|408_bp
atgtatggaggttatgtgtgtgtggaggaggggcagcagtgggaggtggtttttgtgtgg
cccacgaatcagcaacaagagaatctcctggcagcttgtaagaaatacacactcttaggc
tctgtcctagacctactagcggaatcagcagcctcacaagattcccagtgttggtactca
cctacatcaggtaaacaggagacagaagaggtacaaaacaaggggagattgctggatacc
cttacatcaccaagcttcattgaattggtgtcatgctcttgggttttaagaagaacattc
cgagaacaaccaactaagaatcaggctgaaataaaaaatgatgcttacaaacgatccctc
tgtgactctatgtctctatccacagtccaacgtgagaaatttccttag

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_3|398_aa
MAQELRDTCTSFSSQFNQVEERVLVIEDQMNEMKREEKFGEKRVKRNEQSLQEIWNYVKR
PNLRLIGVTEKILITIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLDRPITG
SEIEAIINSLPTKKSPGPDRFTAEFYQRYNEELVAFLLKLFQSTEKEGILPNSFYEASII
LIPKPGRDTTIKENFRLISLMNMDTKILNKILANRIQQHIKKLIHHDQVGFIPGVQDWFN
ICKSINIIHHINRTKDKNHMIISIDAEKAFDKMQQPFMLKTLNKLGTDALITYIRITSVE
KSLNDLKELKTMARELPDTCISFRSQFDQLEERVSVIEDQMNEMKREEKFREKRVKRNKQ
SLQEIWSYVKRPNLRLIGVPESDGENGTKLENTLQDII

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_3|1197_bp
atggcacaagaactacgtgacacatgcacaagcttcagtagccaattcaatcaagtggaa
gaaagggtattagtgattgaagatcaaatgaatgaaatgaagcgagaagagaaatttgga
gaaaaaagagtaaaaagaaacgaacaaagcctccaagaaatatggaactatgtgaaaaga
ccaaatctacgtctgattggcgtaactgaaaaaatactaattaccatcagagaatactat
aaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctcgacaca
tacaccctcccaagactaaaccaggaagaagttgaatcgctggatagaccaataacaggt
tctgaaattgaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagataga
ttcacagctgaattctaccagaggtacaacgaggagctggtagcattccttctgaaacta
ttccaatcaacagaaaaagagggaatcctccctaactcattttatgaggccagcatcatc
ctgataccaaagcctggcagagacacaacaataaaagagaattttagactaatatccctg
atgaacatggacacaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccacgatcaagttggcttcatccctggggtgcaagactggttcaat
atatgcaaatcaataaacataatccatcatataaacagaaccaaagacaaaaatcacatg
attatctcaatagatgcagaaaaggcctttgacaaaatgcaacagcccttcatgctaaaa
actctcaataaactaggtactgatgcacttatcacttatattagaataaccagtgtagag
aagtccttaaatgacctgaaggagctgaaaaccatggcacgagaactacctgacacatgc
ataagcttcaggagccaatttgatcaactggaagaaagggtatcagtgattgaagatcaa
atgaatgaaatgaagcgagaagagaagtttagagaaaaaagagtaaaaagaaacaaacaa
agcctccaagaaatatggagctatgtgaaaagaccaaatctacgtctgattggtgtacct
gaaagtgatggggagaatggaaccaagttggaaaacactctgcaggatattatctag

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_4|102_aa
MTKEKDWDSLGTATWERQPTKKWLRWGIAEKIPQNVKATLELGNRQRGWNSLEGSEEDRK
MWKSLEPPRDLLNGFDKHADSDMNNKVQAEVVSDGDEELVRN

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_4|309_bp
atgacaaaggaaaaggactgggactctctagggacagcaacttgggaaagacaaccaaca
aaaaaatggttaaggtggggcattgccgaaaagataccccaaaatgtgaaagcgactttg
gaactgggtaacaggcagagaggttggaacagtttggagggctcagaagaagataggaaa
atgtggaagagtttggaacctcctagagacttgttgaatggctttgacaaacatgctgat
agtgatatgaacaataaggttcaggctgaggtggtctcagatggagatgaggaacttgtt
aggaactga

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_5|540_aa
MLALLVLVTVALASAHHGGEHFEGEKVFRVNVEDENHINIIRELASTTQIDFWKPDSVTQ
IKPHSTVDFRVKAEDTVTVENVLKQNELQYKKQIPVSINLLHFPKTDTSSYPSSPIEGVT
RRKVQRMSLTYFIRMSLGQPEEKQTFDVCLKFSNLSGAAEGHQEEPEDNMRIYGECNVPS
TKAVALGFYVCSLEKNTLMFIGTPTLVRCRVLISNLRNVVEAQFDSRVRATGHSYEKYNK
WETVGKAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLDKLDFYVL
PVLNIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGP
AAESEKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELMTFGNVWE
TSLVVITVELYWHLAVCQWSFTTEFLSAESLSLGVGCRELEGNGSYEKVMMLLRKKITHP
AAGGSDDWAYDQGIRYSFTFELRDTGRYGFLLPESQIRATCEETFLAIKYVASYVLEHLY

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_5|1623_bp
atgttggcactcttggttctggtgactgtggccctggcatctgctcatcatggtggtgag
cactttgaaggcgagaaggtgttccgtgttaacgttgaagatgaaaatcacattaacata
atccgcgagttggccagcacgacccagattgacttctggaagccagattctgtcacacaa
atcaaacctcacagtacagttgacttccgtgttaaagcagaagatactgtcactgtggag
aatgttctaaagcagaatgaactacaatacaagaaacagattccagttagtattaattta
ttacactttccaaaaacagacacaagttcgtacccaagttcaccaattgaaggagtgacc
aggaggaaggttcagaggatgtccctgacatacttcatcagaatgtccttggggcagcca
gaggagaagcagacttttgatgtgtgtctgaaattctctaatctctctggagcagctgaa
ggtcatcaggaagaaccagaggacaacatgagaatttatggagagtgcaatgtgccatct
actaaagcagtggctctggggttttatgtgtgttcactggagaaaaatacacttatgttc
ataggaacacccactttggttcgttgcagggtactgataagcaacctgagaaatgtggtg
gaggctcagtttgatagccgggttcgtgcaacaggacacagttatgagaagtacaacaag
tgggaaacggttggcaaagctggacaaaataagcctgccattttcatggactgtggtttc
catgccagagagtggatttctcctgcattctgccagtggtttgtaagagaggctgttcgt
acctatggacgtgagatccaagtgacagagcttctcgacaagttagacttttatgtcctg
cctgtgctcaatattgatggctacatctacacctggaccaagagccgattttggagaaag
actcgctccacccatactggatctagctgcattggcacagaccccaacagaaattttgat
gctggttggtgtgaaattggagcctctcgaaacccctgtgatgaaacttactgtggacct
gccgcagagtctgaaaaggagaccaaggccctggctgatttcatccgcaacaaactctct
tccatcaaggcatatctgacaatccactcgtactcccaaatgatgatctacccttactca
tatgcttacaaactcggtgagaacaatgctgagttgatgacatttggcaatgtttgggag
acatctttggttgtcataactgtcgagctctactggcatctagcagtatgtcagtggagt
tttaccacagagtttctgagcgcagagagcctttccctaggagtggggtgcagggaactg
gagggcaatggttcttatgagaaggtgatgatgcttctaagaaaaaagattacacatcct
gctgctgggggctctgacgactgggcttatgaccaaggaatcagatattccttcaccttt
gaacttcgagatacaggcagatatggctttctccttccagaatcccagatccgggctacc
tgcgaggagaccttcctggcaatcaagtatgttgccagctacgtcctggaacacctgtac
tag

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_6|417_aa
MRLILPVGLIATTLAIAPVRFDREKVFRVKPQDEKQADIIKDLAKTNELDFWYPGATHHV
AANMMVDFRVSEKESQAIQSALDQNKMHYEILIHDLQEEIEKQFDVKEDIPGRHSYAKYN
NWEKIVAWTEKMMDKYPEMVSRIKIGSTVEDNPLYVLKIGEKNERRKAIFTDCGIHAREW
VSPAFCQWFVYQATKTYGRNKIMTKLLDRMNFYILPVFNVDGYIWSWTKNRMWRKNRSKN
QNSKCIGTDLNRNFNASWNSIPNTNDPCADNYRGSAPESEKETKAVTNFIRSHLNEIKVY
ITFHSYSQMLLFPYGYTSKLPPNHEDLAKVAKIGTDVLSTRYETRYIYGPIESTIYPISG
SSLDWAYDLGIKHTFAFELRDKGKFGFLLPESRIKPTCRETMLAVKFIAKYILKHTS

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_6|1254_bp
atgaggctcatcctgcctgtgggtttgattgctaccactcttgcaattgctcctgtccgc
tttgacagggagaaggtgttccgcgtgaagccccaggatgaaaaacaagcagacatcata
aaggacttggccaaaaccaatgagcttgacttctggtatccaggtgccacccaccacgta
gctgctaatatgatggtggatttccgagttagtgagaaggaatcccaagccatccagtct
gccttggatcaaaataaaatgcactatgaaatcttgattcatgatctacaagaagagatt
gagaaacagtttgatgttaaagaagatatcccaggcaggcacagctacgcaaaatacaat
aattgggaaaagattgtggcttggactgaaaagatgatggataagtatcctgaaatggtc
tctcgtattaaaattggatctactgttgaagataatccactatatgttctgaagattggg
gaaaagaatgaaagaagaaaggctatttttacggattgtggcattcacgcacgagaatgg
gtctccccagcattctgccagtggtttgtctatcaggcaaccaaaacttatgggagaaac
aaaattatgaccaaactcttggaccgaatgaatttttacattcttcctgtgttcaatgtt
gatggatatatttggtcatggacaaagaaccgcatgtggagaaaaaatcgttccaagaac
caaaactccaaatgcatcggcactgacctcaacaggaattttaatgcttcatggaactcc
attcctaacaccaatgacccatgtgcagataactatcggggctctgcaccagagtccgag
aaagagacgaaagctgtcactaatttcattagaagccacctgaatgaaatcaaggtttac
atcaccttccattcctactcccagatgctattgtttccctatggatatacatcaaaactg
ccacctaaccatgaggacttggccaaagttgcaaagattggcactgatgttctatcaact
cgatatgaaacccgctacatctatggcccaatagaatcaacaatttacccgatatcaggt
tcttctttagactgggcttatgacctgggcatcaaacacacatttgcctttgagctccga
gataaaggcaaatttggttttctccttccagaatcccggataaagccaacgtgcagagag
accatgctagctgtcaaatttattgccaagtatatcctcaagcatacttcctaa

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_7|221_aa
MAPLSAGPPKKAGQPYPTGQGQQFPKQVPKHATQWLGPECIDHSTSSCPRELGTRQGCLL
SPLLFYIVLEGLASAIMQEKEIKACKSEKKQPLLQLPIAGALAFLGMILQKQKLSRTATA
LYQASLRETCLIPQVCGKTRLLLEMEKGLWGGQDASCQSNKVPVKSCRPQRQQIITVSCQ
HFPHILQKQPLDPKHNSSFDSFDDGATAKCCGNQNCLKTAD

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_7|666_bp
atggctccactgagtgcaggtccacccaagaaagctggtcagccttatccaacagggcaa
ggacagcaatttccgaaacaagttcccaaacacgcgacacaatggcttggaccagaatgc
atagaccatagtacatccagctgccccagggaactgggaacaaggcaaggatgtctgctc
tcaccactcttattctacatagtgctggaaggtctagccagtgcaataatgcaagaaaaa
gaaataaaagcatgcaaatcagaaaagaagcagcctcttctccagcttcccatagcgggt
gctctagcatttttggggatgattctccaaaaacaaaaactttccagaactgcaactgct
ctataccaggcctctcttagggagacatgtcttatccctcaggtgtgcggaaaaacacgg
cttctgctggagatggaaaaaggactctggggaggacaagatgcctcatgtcaaagcaac
aaggttccagtgaagagctgcaggcctcagaggcagcaaatcatcacagtgagctgtcag
cattttccccacattctccagaagcagcctctggatcctaaacacaattcttcctttgat
tcttttgatgacggtgcaacagcaaaatgctgtggcaatcaaaactgcctgaaaacagca
gattag

>gi568815595f:148727824_148959999|GENSCAN_predicted_peptide_8|37_aa
XSRVARSRISVKHNAQNGSEEQPVREAARLTGQGEGS

>gi568815595f:148727824_148959999|GENSCAN_predicted_CDS_8|114_bp
nngagcagagttgctagatcaaggatatcagttaaacataatgctcaaaatggcagtgag
gagcaaccagtgagggaagcggcaagactgacgggacagggtgaaggctcctga