GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:16:28

Sequence gi568815583f:74928319_75149232 : 220914 bp : 47.91% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -    914    798  117  0  0   35   86   130 0.066   7.94
 1.03 Intr -   9289   9131  159  2  0   41   45    94 0.044   0.36
 1.02 Intr -   9718   9597  122  0  2   75   82   143 0.642  12.54
 1.01 Init -  14769  14621  149  0  2   76   43    52 0.179  -0.94
 1.00 Prom -  23779  23740   40                              -5.86

 2.05 PlyA -  26122  26117    6                               1.05
 2.04 Term -  28398  27666  733  2  1   -6   47   892 0.774  68.64
 2.03 Intr -  33438  33369   70  1  1   71  100    41 0.890   1.84
 2.02 Intr -  35974  35922   53  0  2   80  119    27 0.904   3.55
 2.01 Init -  36868  36861    8  1  2   95   81     0 0.794   0.52
 2.00 Prom -  38178  38139   40                              -6.16

 3.00 Prom +  45393  45432   40                              -2.46
 3.01 Init +  48013  48171  159  0  0   84   63    50 0.284   1.96
 3.02 Intr +  67257  67355   99  2  0   34  109    75 0.003   4.51
 3.03 Intr +  73938  74006   69  2  0   40   92    57 0.123   0.68
 3.04 Intr +  83474  83528   55  1  1  127  110    25 0.727   7.15
 3.05 Intr +  84359  84487  129  0  0   61   56   152 0.971   9.97
 3.06 Intr +  88275  88431  157  1  1   59  108   177 0.999  15.87
 3.07 Intr +  89552  89653  102  2  0  105   99   102 0.999  12.29
 3.08 Intr +  90076  90217  142  1  1   85   88   186 0.518  18.66
 3.09 Term +  90471  90665  195  2  0  140   46   138 0.985  12.21
 3.10 PlyA +  93152  93157    6                               1.05

 4.00 Prom + 103605 103644   40                              -6.16
 4.01 Init + 108980 109012   33  1  0   79   84    25 0.526   1.07
 4.02 Intr + 115123 115218   96  0  0   98   78   139 0.997  14.11
 4.03 Intr + 116068 116298  231  0  0  113   30   250 0.619  19.67
 4.04 Intr + 120235 120403  169  0  1   81   98   308 0.939  30.62
 4.05 Term + 120832 120917   86  2  2   49   43   131 0.715   2.52
 4.06 PlyA + 121403 121408    6                               1.05

 5.04 PlyA - 122589 122584    6                               1.05
 5.03 Term - 130448 130348  101  0  2  130   42    13 0.271  -0.81
 5.02 Intr - 140769 140583  187  0  1   75   20    95 0.235   0.66
 5.01 Init - 148402 148325   78  1  0   62   93    63 0.216   5.26
 5.00 Prom - 150803 150764   40                              -4.96

 6.03 PlyA - 151008 151003    6                               1.05
 6.02 Term - 158725 158349  377  2  2   37   37   270 0.553  11.70
 6.01 Init - 178194 178146   49  0  1   45   57    64 0.063   0.11
 6.00 Prom - 180654 180615   40                              -5.06

 7.00 Prom + 180893 180932   40                              -4.16
 7.01 Init + 185943 186158  216  2  0   76   86   226 0.897  18.06
 7.02 Intr + 186268 186355   88  0  1   38   77    68 0.648   0.24
 7.03 Intr + 186740 186871  132  0  0   63  101    11 0.508   0.52
 7.04 Intr + 186981 187145  165  1  0   29   44   123 0.161   1.93
 7.05 Intr + 202808 202868   61  0  1  120  103    41 0.216   6.59
 7.06 Term + 212168 212288  121  2  1  127   43    38 0.324   1.15
 7.07 PlyA + 212974 212979    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_1|183_aa
MTFLSHQKSSCCVLKKEEEAKVQVWLLQRDSEGFQGRKWQEEIKDPEDLDPRAAIAVMLG
AALRRCAVAATTRADPRGLLHSARTPGPAVAPTLRPPDREWPPPACSASAKVTLSLRARR
LGSEDTIYFRMGHTIILFNQAFLAIQSVRCYSHGSQETDEEFDARWVTYFNKPDIDAWEL
RKX

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_1|549_bp
atgacatttctgagccatcagaagtccagctgttgtgttttaaaaaaagaagaagaagca
aaagtccaggtgtggcttctccagagggacagcgaaggatttcaaggtaggaaatggcag
gaagagataaaagaccctgaagaccttgacccgcgcgccgccatcgccgtcatgctgggc
gccgctctccgccgctgcgctgtggccgcaaccacccgggccgaccctcgaggcctcctg
cactccgcccggacccccggccccgccgtggcgccgaccctgcggccacctgaccgagag
tggccgccgccggcctgcagcgcctcggcgaaggtgacattgagcctccgggcacgccgc
ttggggtccgaggacacaatatacttccgtatgggacacacgattatacttttcaatcag
gcatttctcgctatccagtcagttcgctgctattcccatgggtcacaggagacagatgag
gagtttgatgctcgctgggtaacatacttcaacaagccagatatagatgcctgggaattg
cgtaaagnn

>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_2|287_aa
MGRERNRGTETFHSLTKGTAGEASCQVMIRPVEKQRPLTNRYVNPPAGVCAAPAPLPLLA
LARRDRRPCSPGAEAAPWQSRRSRRRRRMENFRKVRSEEAPAGCGAEGGGPGSGPFADLA
PGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLH
QVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDALDPRQPGYQ
PPNPHPGPSSPPAAPASKRSLGEPAAGEGSAKRSQPEPGVADEDQTA

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_2|864_bp
atgggaagggaaagaaatcgaggcacagagacgttccatagcttgaccaagggcacagct
ggggaagccagctgccaggtcatgatcagaccagtggagaaacagaggcctctgaccaac
agatatgtgaacccgcccgccggcgtctgcgctgctccggcgcccttacccctgctggcc
cttgcaaggcgcgaccggcggccatgcagccccggggctgaggccgccccatggcaaagc
cggcggtcccggcgacgacggcgcatggagaacttccgtaaggtgcgctccgaagaggcg
ccagcggggtgcggggccgagggaggcggcccgggctccggccccttcgcagacctggcg
ccgggcgcggtgcacatgcgggtcaaggaaggcagcaagatccggaacctgatggccttc
gccaccgccagcatggcgcagccagccacgcgcgccatcgtcttcagcggctgcggccgg
gccaccaccaaaaccgtcacgtgcgccgagatcctcaagcgccgcctggcgggcctgcac
caggtcacgcggctgcgctaccggagcgtacgcgaggtgtggcagagcctcccgcctggg
cccacgcagggtcagacgcctggcgagccggccgctagtctcagcgtacttaagaacgtg
cccggcctcgccatcctactttccaaggacgcgctggatccgcgacagcccggctaccag
cccccgaatccccatcctggtccctcgtccccgccagccgcgccagcgtccaagaggagc
ctaggggaacccgcagctggagaaggctccgcgaagcgatcgcaacccgagccaggggtt
gcggacgaggatcagacggcctga

>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_3|368_aa
MALSACRCQPMHFPVLVDWFGDPLGVKISSDSFMEWINEDNIKKCLCGIFINPPRSGSRP
APRRIARVQRSSAQRCGLSAAERPRQDQGLSTSLHWCPCVSLFTGFVYQFRTKRCGQATG
PAGNIMAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNL
VGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQ
LVISIIQAVGIPGWGVCPTLASSCSGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFI
ALSMVHKFYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQPQTQYSATP
NYTYSNEM

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_3|1107_bp
atggctctttcagcctgcaggtgtcagcccatgcatttccctgtgcttgtggactggttt
ggtgatccactgggtgtcaagatttcttctgatagctttatggaatggatcaatgaggat
aacatcaaaaaatgtttatgtggaatcttcatcaacccaccccggagcggctcgcggccg
gctccgcgccgcatcgctcgggtgcagcgcagctcagcgcagcgctgcggcctttcggca
gccgaacggccgcggcaggatcaaggcttgtccacctccttgcactggtgcccctgtgtc
tccctcttcacgggctttgtctatcagttcaggacaaagaggtgtgggcaggccactggg
ccagctggtaacatcatggcagagaaagtgaacaacttcccaccattgcccaaattcatc
ccgctgaagccatgtttctaccaagacttcgaggcagatattcctccccagcatgtcagc
atgaccaagcgcctctactacctctggatgttgaacagcgtcacgctggccgtgaacctg
gtgggctgtctcgcgtggctgatcggaggcgggggagccaccaactttggcctcgccttt
ctctggctcatcctcttcacaccctgctcctacgtctgctggtttcggcccatttacaag
gccttcaagactgacagctccttcagtttcatggcattcttctttaccttcatggctcag
ttggtcatcagcatcatccaggccgtgggcatcccaggctggggcgtctgccccacactg
gcctcttcctgcagcggctggattgctaccatctccttcttcggaacgaacattggctcg
gcggtggtgatgctaattcccactgtcatgttcacagtgatggccgtcttttccttcatc
gccctcagcatggttcataaattttaccggggaagtggggggagtttcagcaaagctcag
gaggagtggaccacaggggcctggaagaatccacatgtgcagcaggcagcccagaacgca
gccatgggggcagcccagggtgccatgaatcagcctcagactcagtattccgccaccccc
aattacacgtactccaatgagatgtga

>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_4|204_aa
MKEECGPEPPRLEVAVVTTERAKHFYSPQDIPVTLYSDADEWEIWKSRSDPVLHIDLRRW
ADLLLVAPLDANTLGKVASGICDNLLVSDVLVPSSVPGPHTQFAELQTSLYKETCCCGAP
TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA
MAEVGTIVDKVKEVLFQHSGFQQS

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_4|615_bp
atgaaggaagaatgtggtccagagccccccaggctggaagtagcagtggtcacaactgag
agagccaaacatttctacagcccccaggacattcctgtcaccctctacagcgacgctgat
gaatgggagatatggaagagccgctctgacccagttctgcacattgacctgcggaggtgg
gcagacctcctgctggtggctcctcttgatgccaacactctggggaaggtggccagtggc
atctgtgacaacttgcttgtgagtgatgtcctggtgccctcgtccgtccctgggcctcac
acccagtttgctgagctgcagacatccttgtacaaggagacctgctgctgtggggccccg
acctgcgtcatgcgggcctgggaccgcagcaagcccctgctcttctgcccggccatgaac
accgccatgtgggagcacccgatcacagcgcagcaggtagaccagctcaaggcctttggc
tatgtcgagatcccctgtgtggccaagaagctggtgtgcggagatgaaggtctcggggcc
atggctgaagtggggaccatcgtggacaaagtgaaagaagtcctcttccagcacagtggc
ttccagcagagttga

>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_5|121_aa
MLGPSPDTMNSSRKWTNSWAEENRSPPGFCKAFSMLALLLQMLGSRGPKRTTILQMQSEP
EGGKITSFDLHAIPLLMQPKLLAKEATCRIQRPERESAGPPVPKDLLSRLAGKASPCNLS
R

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_5|366_bp
atgttgggaccaagccccgacaccatgaacagcagcaggaagtggaccaattcctgggca
gaagaaaacaggtccccgcctggcttttgcaaagccttcagcatgctggctcttctcctg
cagatgttgggcagcaggggccccaaaaggaccacaatccttcagatgcagtctgagcca
gaaggaggaaaaatcacctcctttgacctgcatgctataccactattaatgcagcccaag
ctattagctaaggaggctacatgcagaatccagaggcctgaaagggagtctgctgggcct
ccagtccctaaggacctgctgtctaggctagcaggcaaagcatcaccatgtaatctcagc
agataa

>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_6|141_aa
MQINASEDDIEDPGTPDESQWFQDGRIGTAPLYSSQHKQHRRRVISAFPTEEHSSSQATE
QSWMENYFDELREEGFRRSVITNFSELKKDVRTHCKEAKNLEKRLDEWLTRINSVEKTLN
YLMELKTMAREHHDACTSISS

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_6|426_bp
atgcaaataaatgcaagtgaagacgatattgaggaccctggtactcctgatgagagtcag
tggttccaagatggccgaataggaacagctccactctacagctcccagcataagcaacac
agaagacgggtgatttctgcattcccaactgaggaacacagctcctcgcaagcaacggaa
caaagctggatggagaattactttgatgagttgagagaagaaggcttcagacgatcagta
ataacaaacttctccgagctaaagaaggatgttcgaacccattgcaaagaagctaaaaac
cttgaaaaaagattagacgaatggctaactagaataaacagcgtagagaagaccttaaat
tacctgatggagctgaaaaccatggcacgagaacaccatgatgcatgcacaagcatcagt
agctga

>gi568815583f:74928319_75149232|GENSCAN_predicted_peptide_7|260_aa
MAVVPLLLSGGLWNTVGASNLAVTRGSMVKLLEMHYSVHLQSHDVLYGSGTGQQSVTSVT
SMDDSNSYWRIWEVGAFGEEGEGSHLDDWTILCNGPYWVRDDLGQYFLSRGLAGDRVDAF
YSYWCVRNWWVLGLTDFKNEATDPCGVKLRTFAVSVTALKAVRLELFVPPGGFVVSLASG
VKLQTFAVSVTAHKSKVDPKTPDNHYSTFCFYEFDYYRQLMDREPEVEGATTLPEPSLPA
VVSWAPTPSAWNLPALIKAG

>gi568815583f:74928319_75149232|GENSCAN_predicted_CDS_7|783_bp
atggctgtggttccgctactgctgtctgggggtttgtggaacaccgtgggagcgtccaat
ctggctgttactcgcggctctatggtgaagctgctcgaaatgcactacagtgtccatctg
cagtcacacgatgtgctctatgggtcaggtactgggcagcagtcagtgacaagtgtaacc
tccatggatgacagcaacagttactggagaatatgggaagtgggtgcttttggtgaggaa
ggtgaaggtagtcacctggatgactggaccatactctgtaacgggccctactgggtgaga
gatgacttgggtcagtactttctgagtagaggacttgctggtgacagggtggatgctttt
tattcatactggtgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaa
gccacggacccttgcggagtgaagctgcggacctttgccgtgagtgttacagctcttaag
gcggtgcgtctggagttgttcgttcctcccggtgggttcgtggtctcgttggcttcagga
gtgaagctgcagacctttgctgtgagtgttacagctcataaaagcaaggtggacccaaag
acccctgacaaccactattctactttctgtttctatgaatttgactactatagacaactc
atggacagagagccggaggtggaaggggccacaactctaccagagccttcccttccagct
gttgtctcctgggcgcccacccccagtgcctggaacttgccagctctcatcaaggctggc
tag