GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:06:46

Sequence gi568815597f:206797833_207003056 : 205224 bp : 44.63% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1029   1174  146  1  2  125   98     0 0.137   4.70
 1.02 Intr +  11596  11676   81  0  0  130   58     6 0.046   1.63
 1.03 Intr +  39126  39191   66  2  0  103   67    54 0.912   3.90
 1.04 Intr +  42018  42170  153  2  0   66   56   205 0.848  15.37
 1.05 Intr +  43172  43246   75  1  0   37  110    34 0.326   0.21
 1.06 Intr +  45995  46104  110  1  2  122   75     2 0.484   1.38
 1.07 Intr +  49436  49501   66  2  0   58   96    43 0.031   0.12
 1.08 Intr +  56731  56837  107  1  2   68   80    26 0.029  -0.34
 1.09 Intr +  67715  67854  140  0  2   60   83    53 0.506   2.18
 1.10 Intr +  67991  68179  189  1  0   73   76    58 0.600   2.88
 1.11 Intr +  68467  68532   66  0  0   77   95    21 0.634   0.80
 1.12 Intr +  68652  68804  153  2  0  107   56    94 0.916   8.37
 1.13 Intr +  87006  87134  129  2  0   33   87   105 0.081   5.79
 1.14 Term +  87265  87405  141  0  0   52   54   103 0.981   1.23
 1.15 PlyA +  88927  88932    6                               1.05

 2.00 Prom +  89861  89900   40                              -0.96
 2.01 Init + 101531 101683  153  1  0   36  101   101 0.232   4.20
 2.02 Term + 105144 105227   84  2  0  112   42   118 0.980   7.25
 2.03 PlyA + 105619 105624    6                               1.05

 3.00 Prom + 107946 107985   40                              -4.76
 3.01 Init + 109787 109852   66  1  0   96  -54   131 0.370  -1.21
 3.02 Intr + 109865 110063  199  1  1   40   61   241 0.578  15.52
 3.03 Term + 110069 110397  329  0  2 -203   52   632 0.585  25.37
 3.04 PlyA + 110402 110407    6                               1.05

 4.07 PlyA - 110942 110937    6                               1.05
 4.06 Term - 111629 111490  140  0  2   97   52    42 0.577  -0.37
 4.05 Intr - 112508 112378  131  1  2  144  105    88 0.773  16.44
 4.04 Intr - 113979 113898   82  1  1   62   94    42 0.618   0.90
 4.03 Intr - 115210 115097  114  2  0   76   78    28 0.523   1.02
 4.02 Intr - 116262 115927  336  1  0   98   66   256 0.741  19.89
 4.01 Init - 127406 127196  211  2  1   67   94    77 0.354   3.92
 4.00 Prom - 128402 128363   40                              -4.96

 5.11 PlyA - 128992 128987    6                              -0.45
 5.10 Term - 132581 132486   96  2  0  109   42   186 0.999  14.07
 5.09 Intr - 133723 133665   59  2  2   87   72    41 0.888   1.00
 5.08 Intr - 133970 133839  132  0  0  101   86    83 0.895  10.02
 5.07 Intr - 134745 134624  122  2  2   12  109   104 0.998   5.04
 5.06 Intr - 135334 135154  181  2  1   77  110   169 0.506  16.93
 5.05 Intr - 136914 136588  327  1  0  104  100   421 0.999  40.57
 5.04 Intr - 137986 137654  333  2  0   91   97   553 0.999  52.04
 5.03 Intr - 139919 139263  657  0  0  113   90   755 0.999  70.01
 5.02 Intr - 141631 141287  345  2  0   90   86   444 0.997  39.76
 5.01 Init - 142699 142657   43  1  1   69   89   121 0.842   9.88
 5.00 Prom - 145757 145718   40                              -3.76

 6.03 PlyA - 146737 146732    6                               1.05
 6.02 Term - 156454 156240  215  2  2   20   38   172 0.567   2.79
 6.01 Init - 158997 158868  130  0  1   89   38   105 0.631   5.91
 6.00 Prom - 160162 160123   40                              -4.86

 7.07 PlyA - 161352 161347    6                               1.05
 7.06 Term - 163391 162586  806  0  2   98   40   219 0.905  11.49
 7.05 Intr - 164719 164381  339  2  0  120   80   368 0.969  34.65
 7.04 Intr - 167956 167883   74  0  2   70   87    33 0.185   0.45
 7.03 Intr - 169294 169220   75  0  0   70  113    25 0.129   1.83
 7.02 Intr - 187698 187606   93  2  0   17   95   127 0.163   5.38
 7.01 Init - 203833 203772   62  1  2   88   68    21 0.109   1.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  24382  24524  143  0  2   86   68   107 0.805   8.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_1|540_aa
XRCLHTLTGVQECALRERFRTDLRVPYHSHMCTHISMCVCQCFGALFHGVFTLAQLQGKT
LLANWVEYFSAQPTVLQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVFKD
HQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQAHCDPA
IVVCSVFRKHTRHVLTIQCMHFVYMHTHKLRTWLLDGISEPALGNSGAHSHEGSASPDGS
LPCPGNGSCSFCMANQAPGSLPGSPCYSGLTCWALTAEPGWGQNKGATTCATNSHSDSEL
RPEIFSSREAWQFFLLLWSPDFRPKMKASSLAFSLLSAAFYLLWTPSTGLKTLNLGSCVI
ATNLQEIRNGFSEIRGSVQAKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVF
KNYQTPDHYTLRKISSLANSFLTIKKDLRLCRIHLEKERSVTCELCSVTGTNVTDIDEFQ
SHVTRNSSKPTTVEEQFSTEKLLRRTLFSPPVGSHMELAIASSASPESTDCLMGLEETSL

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_1|1623_bp
nagcggtgcttgcacacactgacaggagtccaagaatgtgcactgagggagcgtttccgc
acagatctgcgtgttccttaccactcacacatgtgcacacacatatccatgtgtgtgtgc
cagtgctttggggctctgttccacggggtcttcactttagctcagcttcaagggaagact
ctgttggccaactgggtagaatatttctctgcccagcccacagttctgcaagctaaggac
accttcccaaatgtcactatcctgtccacattggagactctgcagatcattaagccctta
gatgtgtgctgcgtgaccaagaacctcctggcgttctacgtggacagggtgttcaaggat
catcaggagccaaaccccaaaatcttgagaaaaatcagcagcattgccaactctttcctc
tacatgcagaaaactctgcggcaatgtcaggaacagaggcagtgtcactgcaggcaggaa
gccaccaatgccaccagagtcatccatgacaactatgatcaggctcactgtgacccagcc
atagttgtttgctctgtgtttcgcaaacacaccaggcatgttctcaccatacagtgtatg
cactttgtgtacatgcacactcataaactgaggacttggctcttggatggcatttctgaa
cctgccctggggaacagtggagcccacagccatgaagggtctgcatctccagatggctct
ctgccatgtcctggcaatggctcttgtagtttctgcatggccaaccaggctccaggtagc
cttcctggttctccctgctactcaggccttacctgctgggcactaacggcggagccagga
tggggacagaataaaggagccacgacctgtgccaccaactcgcactcagactctgaactc
agacctgaaatcttctcttcacgggaggcttggcagtttttcttactcctgtggtctcca
gatttcaggcctaagatgaaagcctctagtcttgccttcagccttctctctgctgcgttt
tatctcctatggactccttccactggactgaagacactcaatttgggaagctgtgtgatc
gccacaaaccttcaggaaatacgaaatggattttctgagatacggggcagtgtgcaagcc
aaagatggaaacattgacatcagaatcttaaggaggactgagtctttgcaagacacaaag
cctgcgaatcgatgctgcctcctgcgccatttgctaagactctatctggacagggtattt
aaaaactaccagacccctgaccattatactctccggaagatcagcagcctcgccaattcc
tttcttaccatcaagaaggacctccggctctgtaggattcaccttgagaaagaaaggagt
gtgacatgtgagctgtgctcagtaacaggaaccaatgtcactgatattgatgaattccag
tcccatgttacgagaaactcctccaaaccaaccactgtggaggagcaatttagcactgag
aagctgctgaggagaaccctcttctcaccaccagtggggtcacacatggagcttgcaata
gctagctcagccagccctgaaagcacagactgcctcatgggcttggaagaaacatccctt
tga

>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_2|78_aa
MVVLPCLGFTLLLWSQVSGAQGQEFHFGPCQVKGVVPQKLWEAFWAVKDTMLDVEAALTK
ALGEVDILLTWMQKFYKL

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_2|237_bp
atggttgtgctcccttgcctgggttttaccctgcttctctggagccaggtatcaggggcc
cagggccaagaattccactttgggccctgccaagtgaagggggttgttccccagaaactg
tgggaagccttctgggctgtgaaagacactatgttggacgtagaagcagctctgaccaaa
gcccttggggaagtggacattcttctgacctggatgcagaaattctacaagctctga

>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_3|197_aa
MAGVQVLVLDGGGHLLGPLAAIVLLGWKVVVVRWEGINISGNFYRNKLKYLAFPRKRMNT
NPSRGPYHFPAPSRILWHKYEACCPKRPSQAALDHLKVFDGILLPYDKKKRMVVPAALKV
VRLKLTRKFAYLERLAHDGGWKYQAVITTLEEKWKEKAKFHYRKKKQLMRLRKRAEKNVE
KKTDKYTEVLKTHGLLV

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_3|594_bp
atggcgggggtgcaggtcctggtgcttgatggtggaggccatctcctgggccccctggcg
gccatcgtactgctgggctggaaggtggttgtcgtacgctgggagggcatcaacatttct
ggcaatttctacagaaacaagttgaagtacctggctttcccccgcaagcggatgaacacc
aacccttcccgaggtccctaccacttcccggcccccagccgcatcttgtggcacaagtac
gaggcttgctgccccaagagaccaagccaggccgccctggaccacctcaaggtgtttgac
ggcatcctactgccctacgacaagaaaaagcggatggtggttcctgctgccctcaaggtc
gtgcgtctgaagcttacaagaaagtttgcctatctggagcgcctggctcacgatggtggc
tggaagtaccaggcagtgataaccaccctggaggagaagtggaaggagaaggccaagttc
cactacaggaagaagaaacagctcatgaggctacggaaacgggccgagaagaacgtggag
aagaaaactgacaaatacacagaggtcctcaagacccacgggctcctggtctga

>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_4|337_aa
MVCSSLADTPLGVRVPGHHGSPVSQKGEIELRREKKKEENKDVRIVKFTISPAVSLPLGP
NPHDPGATAKVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGTVV
STTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNV
HSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRASKISALEGLLKPQTPSYNH
HTRLHRQRALDYGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKGKLRSCPDW
QPRPDWAAPALGGDPSVASRAAAAAIRRAGFPAAPGP

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_4|1014_bp
atggtgtgctccagcctggcagacactcccctgggagtaagagtgccagggcaccatggt
agccctgtgagtcagaaaggagaaatcgagcttagacgagaaaaaaagaaagaagaaaat
aaggatgtaagaattgtaaagttcacaatttcaccagcagtcagtcttcccttgggcccc
aacccccatgacccaggggcaacagctaaagtatcgggggccctgaggatcctcccagaa
gtaaaggtagagggggagctgggcggatcagttaccatcaagtgcccacttcctgaaatg
catgtgaggatatatctgtgccgggagatggctggatctggaacatgtggtaccgtggta
tccaccaccaacttcatcaaggcagaatacaagggccgagttactctgaagcaataccca
cgcaagaatctgttcctagtggaggtaacacagctgacagaaagtgacagcggagtctat
gcctgcggagcgggcatgaacacagaccggggaaagacccagaaagtcaccctgaatgtc
cacagtgaatacgagccatcatgggaagagcagccaatgcctgagactccaaaatggttt
catctgccctatttgttccagatgcctgcatatgccagttcttccaaattcgtaaccaga
gcctcaaaaatctcagctctggaggggctgctcaagccccagacgcccagctacaaccac
cacaccaggctgcacaggcagagagcactggactatggctcacagtctgggagggaaggc
caaggatttcacatcctgatcccgaccatcctgggccttttcctgctggcacttctgggg
ctggtggtgaaaagggccgttgaaaggaggaaaggtaagctccgctcctgccctgattgg
cagccgcggcccgactgggcggccccagccctgggcggggacccgagtgtggcttcccgc
gccgccgccgccgcgatccggagagcgggtttcccagcagctcctgggccctga

>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_5|764_aa
MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA
RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS
FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS
GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP
EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN
PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK
GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG
NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV
PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG
WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ
DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV
ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE
STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_5|2295_bp
atgctgctcttcgtgctcacctgcctgctggcggtcttcccagccatctccacgaagagt
cccatatttggtcccgaggaggtgaatagtgtggaaggtaactcagtgtccatcacgtgc
tactacccacccacctctgtcaaccggcacacccggaagtactggtgccggcagggagct
agaggtggctgcataaccctcatctcctcggagggctacgtctccagcaaatatgcaggc
agggctaacctcaccaacttcccggagaacggcacatttgtggtgaacattgcccagctg
agccaggatgactccgggcgctacaagtgtggcctgggcatcaatagccgaggcctgtcc
tttgatgtcagcctggaggtcagccagggtcctgggctcctaaatgacactaaagtctac
acagtggacctgggcagaacggtgaccatcaactgccctttcaagactgagaatgctcaa
aagaggaagtccttgtacaagcagataggcctgtaccctgtgctggtcatcgactccagt
ggttatgtaaatcccaactatacaggaagaatacgccttgatattcagggtactggccag
ttactgttcagcgttgtcatcaaccaactcaggctcagcgatgctgggcagtatctctgc
caggctggggatgattccaatagtaataagaagaatgctgacctccaagtgctaaagccc
gagcccgagctggtttatgaagacctgaggggctcagtgaccttccactgtgccctgggc
cctgaggtggcaaacgtggccaaatttctgtgccgacagagcagtggggaaaactgtgac
gtggtcgtcaacaccctggggaagagggccccagcctttgagggcaggatcctgctcaac
ccccaggacaaggatggctcattcagtgtggtgatcacaggcctgaggaaggaggatgca
gggcgctacctgtgtggagcccattcggatggtcagctgcaggaaggctcgcctatccag
gcctggcaactcttcgtcaatgaggagtccacgattccccgcagccccactgtggtgaag
ggggtggcaggaggctctgtggccgtgctctgcccctacaaccgtaaggaaagcaaaagc
atcaagtactggtgtctctgggaaggggcccagaatggccgctgccccctgctggtggac
agcgaggggtgggttaaggcccagtacgagggccgcctctccctgctggaggagccaggc
aacggcaccttcactgtcatcctcaaccagctcaccagccgggacgccggcttctactgg
tgtctgaccaacggcgatactctctggaggaccaccgtggagatcaagattatcgaagga
gaaccaaacctcaaggtaccagggaatgtcacggctgtgctgggagagactctcaaggtc
ccctgtcactttccatgcaaattctcctcgtacgagaaatactggtgcaagtggaataac
acgggctgccaggccctgcccagccaagacgaaggccccagcaaggccttcgtgaactgt
gacgagaacagccggcttgtctccctgaccctgaacctggtgaccagggctgatgagggc
tggtactggtgtggagtgaagcagggccacttctatggagagactgcagccgtctatgtg
gcagttgaagagaggaaggcagcggggtcccgcgatgtcagcctagcgaaggcagacgct
gctcctgatgagaaggtgctagactctggttttcgggagattgagaacaaagccattcag
gatcccaggctttttgcagaggaaaaggcggtggcagatacaagagatcaagccgatggg
agcagagcatctgtggattccggcagctctgaggaacaaggtggaagctccagagcgctg
gtctccaccctggtgcccctgggcctggtgctggcagtgggagccgtggctgtgggggtg
gccagagcccggcacaggaagaacgtcgaccgagtttcaatcagaagctacaggacagac
attagcatgtcagacttcgagaactccagggaatttggagccaatgacaacatgggagcc
tcttcgatcactcaggagacatccctcggaggaaaagaagagtttgttgccaccactgag
agcaccacagagaccaaagaacccaagaaggcaaaaaggtcatccaaggaggaagccgag
atggcctacaaagacttcctgctccagtccagcaccgtggccgccgaggcccaggacggc
ccccaggaagcctag

>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_6|114_aa
MDPIQPMREQALQGVYFSKGHSEQPTSTAMFWIAVPLAWIYDLACSLHCQQYDELSSYCL
LSKGPAETHVGSREAAALGENPMLHLYRHVVITSANAPGLQTTVCLLDALHQRH

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_6|345_bp
atggatcctattcaaccaatgagggagcaggctctgcaaggtgtgtacttcagcaaaggc
cactcggagcagcccacctccacagctatgttctggatcgccgtgccccttgcttggatt
tatgatctagcctgctcccttcactgtcagcagtatgatgagctgtcatcctactgccta
ctctctaaggggccagctgaaacccatgtgggcagcagagaagcggcagccttaggagag
aaccccatgctgcacctctacaggcatgtggtgatcaccagtgccaatgcccctggcctg
cagaccactgtttgcctcctggatgcattgcatcaaagacattga

>gi568815597f:206797833_207003056|GENSCAN_predicted_peptide_7|482_aa
MADGKHPAQATVQGARLACPGERRTIQVLHGSTVKEKEVNRHPILVDAHRSRVFFAGHQQ
EGGMENAPLPHTVPATRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAV
TIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVV
RLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAGPASTLPTATPAAGELTMRSYGTASP
VANRWTPGTTQTLGQGTAWDTVASTPGTSKTTASAEGRRTPGATRPAAPGTGSWAEGSVK
APAPIPESPPSKSRSMSNTTEGVWEGTRSSVTNRARASKDRREMTTTKADRPREDIEGVR
IALDAAKKVLGTIGPPALVSETLAWEILPQATPVSKQQSQGSIGETTPAAGMWTLGTPAA
DVWILGTPAADVWTSMEAASGEGSAAGDLDAATGDRGPQATLSQTPAVGPWGPPGKESSV
KR

>gi568815597f:206797833_207003056|GENSCAN_predicted_CDS_7|1449_bp
atggctgatggcaaacacccagcacaggcaacagttcagggagcacgtctggcctgtcct
ggggaacggaggacaatccaggtcctgcatggatcaacggtcaaagagaaagaagtcaat
agacatcccatcctggtggatgcccatcggagcagagtgttttttgcaggtcaccagcag
gagggcgggatggaaaatgcccctcttcctcatactgtgcctgctacaaggacccatctc
cgggccatgggaacactcaggccttcctcgcccctctgctggcgggaggagagctccttt
gcagctccaaattcattgaagggctcaaggctggtgtcaggggagcctggaggagctgtc
accatccagtgccattatgccccctcatctgtcaacaggcaccagaggaagtactggtgc
cgtctggggcccccaagatggatctgccagaccattgtgtccaccaaccagtatactcac
catcgctatcgtgaccgtgtggccctcacagactttccacagagaggcttgtttgtggtg
aggctgtcccaactgtccccggatgacatcggatgctacctctgcggcattggaagtgaa
aacaacatgctgttcttaagcatgaatctgaccatctctgcaggtcccgccagcaccctc
cccacagccactccagctgctggggagctcaccatgagatcctatggaacagcgtctcca
gtggccaacagatggaccccaggaaccacccagaccttaggacaggggacagcatgggac
acagttgcttccactccaggaaccagcaagactacagcttcagctgagggaagacgaacc
ccaggagcaaccaggccagcagctccagggacaggcagctgggcagagggttctgtcaaa
gcacctgctccgattccagagagtccaccttcaaagagcagaagcatgtccaatacaaca
gaaggtgtttgggagggcaccagaagctcggtgacaaacagggctagagccagcaaggac
aggagggagatgacaactaccaaggctgataggccaagggaggacatagagggggtcagg
atagctcttgatgcagccaaaaaggtcctaggaaccattgggccaccagctctggtctca
gaaactttggcctgggaaatcctcccacaagcaacgccagtttctaagcaacaatctcag
ggttccattggagaaacaactccagctgcaggcatgtggaccttgggaactccagctgca
gatgtgtggatcttgggaactccagctgcagatgtgtggaccagcatggaggcagcatct
ggggaaggaagcgctgcaggggacctagatgctgccactggagacagaggtccccaagca
acactgagccagaccccggcagtaggaccctggggaccccctggcaaggagtcctccgtg
aagcggtaa