GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:11:30

Sequence gi568815597f:163226052_163455466 : 229415 bp : 37.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    767    762    6                               1.05
 1.03 Term -   2757   2273  485  1  2  -20   43   328 0.521  11.42
 1.02 Intr -   3054   2815  240  1  0   38   34   190 0.232   5.20
 1.01 Init -   9416   9401   16  2  1   82   94    48 0.336   5.23
 1.00 Prom -  21599  21560   40                              -5.05

 2.00 Prom +  24811  24850   40                              -6.75
 2.01 Init +  29315  29719  405  1  0   68   13   245 0.413  11.64
 2.02 Intr +  39954  40147  194  2  2   77   78    87 0.330   3.97
 2.03 Intr +  59753  59796   44  2  2  127  106    48 0.339   7.47
 2.04 Term +  80678  80862  185  0  2   32   38   146 0.024   0.72
 2.05 PlyA +  81570  81575    6                               1.05

 3.03 PlyA -  81730  81725    6                               1.05
 3.02 Term -  83643  83489  155  1  2   18   42   154 0.475   0.90
 3.01 Init -  86194  86155   40  1  1   86   94    45 0.708   5.31
 3.00 Prom -  88313  88274   40                              -3.95

 4.03 PlyA -  90676  90671    6                               1.05
 4.02 Term -  96009  95656  354  0  0   77   43   405 0.337  28.41
 4.01 Init -  96697  96686   12  1  0   85   70    11 0.281  -1.86
 4.00 Prom -  97328  97289   40                              -6.15

 5.00 Prom +  99510  99549   40                              -7.55
 5.01 Init + 100001 100123  123  1  0   78   93   105 0.634  10.22
 5.02 Intr + 117682 117819  138  0  0   55   70    74 0.556   2.04
 5.03 Intr + 121712 121887  176  1  2   53   -1   238 0.985   9.22
 5.04 Intr + 122894 123029  136  2  1   93   68   167 0.999  14.85
 5.05 Term + 129284 129418  135  1  0   87   38   144 0.987   6.34
 5.06 PlyA + 130149 130154    6                               1.05

 6.00 Prom + 149034 149073   40                              -5.95
 6.01 Init + 164616 164648   33  2  0  100   68    16 0.321   0.73
 6.02 Intr + 172396 172476   81  0  0   76   90    41 0.375   2.02
 6.03 Intr + 174055 174183  129  0  0  124   56    33 0.617   3.67
 6.04 Intr + 176260 176359  100  0  1  106   42    76 0.050   3.56
 6.05 Intr + 180919 181039  121  2  1   26   45   107 0.030  -1.17
 6.06 Term + 183246 183573  328  0  1   84   55   178 0.437   7.30
 6.07 PlyA + 186010 186015    6                               1.05

 7.04 PlyA - 186312 186307    6                               1.05
 7.03 Term - 186568 186494   75  1  0   91   35    60 0.046  -2.14
 7.02 Intr - 192567 192440  128  1  2   36   70    78 0.111   0.28
 7.01 Init - 197113 197047   67  1  1   82   59   124 0.515  10.19
 7.00 Prom - 206537 206498   40                              -3.25

 8.00 Prom + 211147 211186   40                              -3.45
 8.01 Init + 216193 216224   32  0  2   83  100    31 0.065   3.06
 8.02 Intr + 217519 217564   46  1  1   77   91    35 0.031   0.19
 8.03 Intr + 227624 227657   34  1  1  127  119   -21 0.002   1.78
 8.04 Term + 228554 228687  134  0  2   41   37   100 0.002  -2.53
 8.05 PlyA + 229055 229060    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 134689 134627   63  1  0  121   38    91 0.804   4.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_1|246_aa
MSVAGEWGTAVKILKNLEMTLERVTGRGWNSLEDSEEDRKIWENLELPRNLLNGFGQNAD
SDVDNKVQAELVSHGNEELLGNGGKDLWNFELETDDLGYLVEEISKWQSIEGEVEDESLE
NLQPDDAIEKKNPFSGEKFKSAAEIYISNQEPNVNHQDNGEKVSRVCQRLSQQPLPSQAR
RPRREKWCPGPGPGPPCCVQPWDLVPCIPATPTIAKRGQSTAQSIASEGESPKPWQLPCG
VGPVDA

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_1|741_bp
atgtccgtggctggagaatggggcactgctgtaaagatactaaaaaatttggaaatgact
ttggaacgggtaacaggcagaggttggaacagtttggaggactcagaagaagacaggaag
atatgggaaaatttggaacttcctagaaacttgttgaatggttttggccaaaatgctgat
agtgatgtggacaataaggtccaggctgagctggtctcacatggaaatgaggaacttctt
gggaacgggggcaaagatctgtggaactttgaacttgaaacagatgatttagggtatctg
gtggaagaaatttctaagtggcaaagcattgaaggggaagtagaggatgaaagtttggaa
aatttgcagcctgatgatgcaatagaaaagaaaaacccattttctggggagaaattcaag
tctgctgcagaaatttacataagtaatcaggagccaaatgttaatcaccaagacaatggg
gaaaaggtgtccagggtgtgtcagagactttcacagcagccccttccatcacaggcccgg
aggcctaggagggaaaaatggtgtcctgggccgggtccagggcccccttgctgtgtgcag
ccttgggacttggtgccctgcatcccagccactccaaccatagctaaaaggggtcagagt
acagctcagtccattgcttcagagggcgaaagccccaagccttggcagcttccatgtggt
gttgggcctgtggatgcatag

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_2|275_aa
MGKFLDTYILPRLNQEEVDSLNIPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILSKILA
NRIQQHIKKLIHHDQSYQPNCLLDSRWRLQQSQHPGQQQFSVELISYSTATPSTSEGSAP
VFITTPIYGKTQTPASKLEKPYEDRAYFPFAFAMGNLDTKIHTRMPCEDKGYWGDKSTSQ
GMPKIASKPPEARERHETDSSSQPSEGINLADILI

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_2|828_bp
atgggtaaattcctcgacacatacatcctcccaagactaaaccaggaagaagttgactct
ctgaatataccaataacaggctctgaaatagtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagctgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcagtaaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaaagttatcagcccaac
tgcctactggactccaggtggaggctgcaacagtctcaacatccaggccagcaacagttc
agtgttgaactaatctcctacagcactgccaccccatcaacctcagagggatctgctcct
gtttttattacaaccccaatttatggcaagacccagaccccggcatctaagttagaaaag
ccatatgaagaccgtgcctacttcccctttgcctttgccatgggaaatttggacacaaaa
atacacacaagaatgccatgtgaagataaaggatattggggtgataaatctacaagccaa
ggaatgccaaagattgccagcaaaccaccagaagccagggagaggcatgaaaccgattca
tcctcacagccctcagaaggcatcaaccttgctgatatcttaatctag

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_3|64_aa
MVEEEAGMSYMAAGIWKKLIPGLMNDFMTLVEEAPEDVMEIARELELEVAPEDVTKLLQY
YNKT

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_3|195_bp
atggtggaagaggaagcaggcatgtcttacatggcagcaggaatttggaagaagttaatt
ccaggccttatgaatgacttcatgactttagtggaggaagcacctgaagatgtgatggaa
atagcaagagaactagaattagaagtggcacctgaagatgtgactaaattgctgcaatat
tataataaaacttga

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_4|121_aa
MLSRCRPPTGRRRVRGAATSKVKNQQTSTVITFQTCRLLLEVPPHSAKPTSNRDGCRLGS
RDARQVGLELSWKGQGAGRNHCSRSWRRVGTSDCRKWEHRGFGEETGVERLAHLCVTSAS
V

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_4|366_bp
atgctgagcagatgccggccgccgacaggaagacggcgagttcggggagcagctacaagc
aaagtcaaaaatcagcaaacgtcaaccgtcatcacttttcaaacttgccgcctcctactg
gaagtcccgccccattccgccaagcccacgtccaaccgcgacggatgccggttgggctca
agagacgccaggcaggtgggactggagttgtcatggaaggggcagggcgcagggcggaac
cattgctcgcggagctggcgtcgagtcggaacctcggactgcaggaagtgggagcaccgc
ggtttcggggaagagaccggggttgagcgtctagcccatctctgcgtgacttccgccagc
gtttag

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_5|235_aa
METLSFPRYNVAEIVIHIRNKILTGADGKNLTKNDLYPNPKNELKLSVVSLKEIQESLKT
KIVDSPEKLKNYKEKMKDTVQKLKNARSLNLEDQIESDESELKKLKTEENSFKRLMIVKK
EKLATAQFKINKKHEDVKQYKRTVIEDCNKVQEKRGAVYERVTTINQEIQKIKLGIQQLK
DAAEREKLKSQEIFLNLKTALEKYHDGIEKAAEDSYAKIDEKTAELKRKMFKMST

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_5|708_bp
atggaaactttgtctttccccagatataatgtagctgagattgtgattcatattcgcaat
aagatcttaacaggagctgatggtaaaaacctcaccaagaatgatctttatccaaatcca
aagaatgaactaaaattgtcggtggtttctttgaaagaaatacaagagagtttgaaaaca
aaaattgtggattctccagagaagttaaagaattataaagaaaaaatgaaagatacggtc
cagaagcttaaaaatgccagaagcctgaacttggaggaccaaattgagagtgatgagtca
gaactgaagaaattgaagactgaagaaaattcgttcaaaagactgatgattgtgaagaag
gaaaaacttgccacagcacaattcaaaataaataagaagcatgaagatgttaagcaatac
aaacgcacagtaattgaggattgcaataaagttcaagaaaaaagaggtgctgtctatgaa
cgagtaaccacaattaatcaagaaatccaaaaaattaaacttggaattcaacaactaaaa
gatgctgctgaaagggagaaactgaagtcccaggaaatatttctaaacttgaaaactgct
ttggagaaataccacgacggtattgaaaaggcagcagaggactcctatgctaagatagat
gagaagacagctgaactgaagaggaagatgttcaaaatgtcaacctga

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_6|263_aa
MPGTHCLSGEWDDTFTSENLKQKSTPIGSLRSEFLDKKVSEQLCCRRSQGVGGFKPWGFF
YEPSAEKGAFHMLQPAVRYSLSFLGVFCGYSGSRAKLWAQLALQSDIKEVVQCPCVIIGS
HVDTPWAKQPSLQHLHKSSRGGWALPVQGLPVEAGVDNSPYYASPSSHRHGEKAVTSNIL
QMRMQKRLRSLCIWPEVNGFELGVHICLASKLAVFSLCYAVLWAGEELWKAVEEKKGEMR
MMVSKSRACGDSQKEDLEWPKGS

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_6|792_bp
atgcctggaacacattgtctcagtggagaatgggatgacacatttacttctgaaaacctt
aagcagaaatctactccaattgggtcattgaggtcagagttcctagacaaaaaggtctcg
gagcagctctgctgtcggagatcgcagggagttggtggattcaagccatggggcttcttt
tatgagccaagtgcagagaaaggagcttttcatatgctccagcctgcagtcaggtactcc
ctgtcctttctgggagtattctgtggctattcaggttccagggcaaaactatgggcacaa
cttgctctccagagtgacataaaggaagtggttcagtgcccttgtgttatcatcgggagc
catgtggatactccctgggccaagcagccgtcccttcagcaccttcacaaaagcagccgt
ggaggatgggctctgcctgtgcaaggcctccctgtggaagctggtgtagacaactcacct
tattatgccagtccctcctcccaccgacacggtgagaaggctgttaccagtaacatctta
cagatgaggatgcagaagaggctcagatccctgtgtatatggcctgaagtcaatggtttt
gaacttggagtccacatctgtttagcttcaaagcttgcggtcttttcactctgctatgct
gtcctgtgggctggtgaggaactgtggaaagcagtggaagagaagaagggagagatgagg
atgatggtatcaaagtcgagggcatgtggggactcacaaaaggaggatttagagtggccc
aagggttcatga

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_7|89_aa
MAAAVPVLPVRLRNSVKHRCAGALSQYEASIFWRWEGQDGGSKCLKRTFPLQKKGEELRE
WAMNTSWGKAMTPVLFCSKAGEECLDDSR

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_7|270_bp
atggcggcggctgtgccggtgctcccagtacgcctcaggaattccgtgaagcaccgctgt
gcgggagcactcagtcagtatgaggccagcatcttctggagatgggaaggacaagatgga
ggttcaaaatgtctgaagagaactttcccccttcagaaaaagggggaagaattgagagag
tgggccatgaatacaagttggggcaaagcaatgactcctgtgctgttctgttctaaagct
ggagaggagtgcttggatgacagcagataa

>gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_8|81_aa
MNKTDSMEKEKLLLLLPENGFDNERMGNKCIGQSHRAGKLKPPMVVIKSELEQLAEPNTK
PSVKMTRMYTGANGEREKETR

>gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_8|246_bp
atgaacaagacagatagcatggagaaagagaagcttctcctgcttttacctgagaatggt
tttgataatgagagaatgggaaacaaatgcataggccaaagtcacagagctgggaaactg
aagccacccatggtggtcataaaatctgaattagagcaattggctgaaccaaatacaaaa
ccttcagtcaagatgactagaatgtacacaggtgccaatggggagagggagaaggaaact
cgctag