GENSCAN 1.0 Date run: 6-Nov-116 Time: 23:12:52 Sequence gi568815585f:72959328_73175883 : 216556 bp : 40.54% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Intr + 5947 6077 131 0 2 58 97 151 0.894 11.57 1.02 Intr + 14264 14348 85 2 1 96 53 82 0.854 4.40 1.03 Intr + 39495 39668 174 2 0 64 78 107 0.287 6.51 1.04 Intr + 71063 71089 27 1 0 82 106 41 0.008 2.69 1.05 Intr + 99557 99671 115 1 1 88 10 146 0.427 5.90 1.06 Intr + 99720 100261 542 1 2 -10 91 315 0.506 13.69 1.07 Intr + 102534 103407 874 2 1 86 84 656 0.970 54.97 1.08 Term + 116330 116559 230 0 2 68 53 266 0.521 16.91 1.09 PlyA + 117784 117789 6 1.05 2.02 PlyA - 117864 117859 6 1.05 2.01 Sngl - 141658 141251 408 1 0 115 42 418 0.961 35.94 2.00 Prom - 144289 144250 40 -4.05 3.06 PlyA - 147831 147826 6 1.05 3.05 Term - 189400 189329 72 1 0 109 54 68 0.218 2.43 3.04 Intr - 195288 195233 56 1 2 113 78 16 0.167 0.88 3.03 Intr - 203994 203885 110 2 2 62 77 158 0.143 11.11 3.02 Intr - 204205 204165 41 1 2 73 115 0 0.604 -2.70 3.01 Init - 207089 206955 135 2 0 84 75 51 0.442 3.59 3.00 Prom - 212101 212062 40 -1.95 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Term + 159261 159373 113 1 2 125 44 50 0.838 2.04 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815585f:72959328_73175883|GENSCAN_predicted_peptide_1|725_aa LDRANSLLNQTQQPYRYLIESVRQRDSKIDSLTESIAQLEKDVSNLNKEKSALLQTKNQM ALDLEQLLNHREELAAMKQILVKMHSKHSENSLLLTKTEPKHVTENQKSKTLNVPKEHED NIFTPKPTLFVFIVPCDWWAGRSGLAGLGASGFAAALPIRRSGPAPPELGEIEAGVKCRR WRERAPESLRARWGGAGESGRPEDVGVYVWKSGRVLLFVRAFENCLPLSEESTRNLPSSA GSPALSSPTQASVGEVGSAPDPRLELRPRVPMATRVLSMSARLGPVPQPPAPQDEPVFAQ LKPVLGAANPARDAALFPGEELKHAHHRPQAQPAPAQAPQPAQPPATGPRLPPEDLVQTR CEMEKYLTPQLPPVPIIPEHKKYRRDSASVVDQFFTDTEGLPYSINMNVFLPDITHLRTG LYKSQRPCVTHIKTEPVAIFSHQSETTAPPPAPTQALPEFTSIFSSHQTAAPEVNNIFIK QELPTPDLHLSVPTQQGHLYQLLNTPDLDMPSSTNQTAAMDTLNVSMSAAMAGLNTHTSA VPQTAVKQFQGMPPCTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQAEMLQNLTPPPSYA ATIASKLAIHNPNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCLHYKQAALP PLFVVTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM KRHQN >gi568815585f:72959328_73175883|GENSCAN_predicted_CDS_1|2178_bp cttgacagagccaattcgctattaaaccagactcaacagccttacaggtatctcattgaa tcagtgcgtcagagagattctaagattgattcactgacggaatctattgcacaacttgag aaagatgtcagcaacttaaataaagaaaagtcagctttactacagacgaagaatcaaatg gcattagatttagaacaacttctaaatcatcgtgaggaattggcagcaatgaaacagatt ctcgttaagatgcatagtaaacattctgagaacagcttacttctcactaaaacagaacca aaacatgtgacagaaaatcagaaatcaaagactttgaatgtgcctaaagagcatgaagac aatatatttacacctaaaccaacactctttgtcttcatcgtcccatgtgactggtgggct ggccgctcaggcctggccggcctcggggcctcgggattcgcggcggcgctgccaatcagg cgatcgggccccgcccccccggagttgggtgaaatagaggcgggcgtcaagtgtcggcgg tggcgggagcgggctccggagagcctgagagcacggtggggcggggcgggagaaagtggc cgcccggaggacgttggcgtttacgtgtggaagagcggaagagttttgcttttcgtgcgc gccttcgaaaactgcctgccgctgtctgaggagtccacccgaaacctcccctcctccgcc ggcagccccgcgctgagctcgccgacccaagccagcgtgggcgaggtgggaagtgcgccc gacccgcgcctggagctgcgcccccgagtgcccatggctacaagggtgctgagcatgagc gcccgcctgggacccgtgccccagccgccggcgccgcaggacgagccggtgttcgcgcag ctcaagccggtgctgggcgccgcgaatccggcccgcgacgcggcgctcttccccggcgag gagctgaagcacgcgcaccaccgcccgcaggcgcagcccgcgcccgcgcaggccccgcag ccggcccagccgcccgccaccggcccgcggctgcctccagaggacctggtccagacaaga tgtgaaatggagaagtatctgacacctcagcttcctccagttcctataattccagagcat aaaaagtatagacgagacagtgcctcagtcgtagaccagttcttcactgacactgaaggg ttaccttacagtatcaacatgaacgtcttcctccctgacatcactcacctgagaactggc ctctacaaatcccagagaccgtgcgtaacacacatcaagacagaacctgttgccattttc agccaccagagtgaaacgactgcccctcctccggccccgacccaggccctccctgagttc accagtatattcagctcacaccagaccgcagctccagaggtgaacaatattttcatcaaa caagaacttcctacaccagatcttcatctttctgtccctacccagcagggccacctgtac cagctactgaatacaccggatctagatatgcccagttctacaaatcagacagcagcaatg gacactcttaatgtttctatgtcagctgccatggcaggccttaacacacacacctctgct gttccgcagactgcagtgaaacaattccagggcatgcccccttgcacatacacaatgcca agtcagtttcttccacaacaggccacttactttcccccgtcaccaccaagctcagagcct ggaagtccagatagacaagcagagatgctccagaatttaaccccacctccatcctatgct gctacaattgcttctaaactggcaattcacaatccaaatttacccaccaccctgccagtt aactcacaaaacatccaacctgtcagatacaatagaaggagtaaccccgatttggagaaa cgacgcatccactactgcgattaccctggatgtttgcattacaagcaggccgctttacct cctttgttcgttgtcacaggtgaaaagccatacaagtgtacctgggaaggctgcgactgg aggttcgcgcgatcggatgagctgacccgccactaccggaagcacacaggcgccaagccc ttccagtgcggggtgtgcaaccgcagcttctcgcgctctgaccacctggccctgcatatg aagaggcaccagaactga >gi568815585f:72959328_73175883|GENSCAN_predicted_peptide_2|135_aa MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIVTCDGKNLTIKTESTL KTTQFSCPLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC VMNHVACTRIYEKVE >gi568815585f:72959328_73175883|GENSCAN_predicted_CDS_2|408_bp atggccacagttcagcagctggaaggaagatggcgcctggtggacagcaaaggctttgat gaatacatgaaggagctaggagtgggaatagctttgcgaaaaatgggcgcaatggccaag ccagattgtattgtcacttgtgatggcaaaaacctcaccataaaaactgagagcactttg aaaacaacacagttttcttgtcccctgggagagaagtttgaagaaaccacagctgatggc agaaaaactcagactgtctgcaactttacagatggtgcattggttcagcatcaggagtgg gatgggaaggaaagcacaataacaagaaaattgaaagatgggaaattagtggtggagtgt gtcatgaaccatgtcgcctgtactcggatctatgaaaaagtagaataa >gi568815585f:72959328_73175883|GENSCAN_predicted_peptide_3|137_aa MLESGRRTFQVEETARVKVQGQESTECSRNIQEPVRMEHCESRREPYCGVLYCMPPSRRL WYLFVLYISSNAYTSNTSCFDDDHNNDEDDDDDGDVLNKKISCLQNMEKGKLRMQSPVSI AAIFMSMNGQCLVPTYK >gi568815585f:72959328_73175883|GENSCAN_predicted_CDS_3|414_bp atgctggaatctggtaggagaacattccaagtagaggaaacagcaagagtaaaggtccag gggcaggaatccactgagtgttcaaggaatatccaggagccagtgaggatggagcattgt gaatcgaggagagagccatactgtggtgtcctatactgtatgccaccttctagaaggctc tggtatttatttgtgctgtacatcagttctaatgcctatacttcaaacacctcctgtttt gatgatgaccataacaatgatgaggatgatgatgatgatggtgatgtgctaaataagaaa ataagttgtcttcagaatatggaaaaaggaaaactaagaatgcagtccccggtgtctatt gctgccatctttatgtccatgaatggccaatgtttagttcccacttacaaatga