GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:58:06

Sequence gi568815597f:192709072_192911593 : 202522 bp : 37.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5670   5764   95  2  2   96  110    53 0.879   8.20
 1.02 Term +   7096   7582  487  1  1   45   36   471 0.834  30.79
 1.03 PlyA +   7594   7599    6                               1.05

 2.06 PlyA -   7644   7639    6                               1.05
 2.05 Term -  17767  17615  153  1  0  118   53    93 0.635   5.74
 2.04 Intr -  20063  19916  148  1  1   40   78    51 0.285  -1.38
 2.03 Intr -  36634  36553   82  2  1   97   94    71 0.317   6.38
 2.02 Intr -  43127  42975  153  0  0   48   44   115 0.493   2.22
 2.01 Init -  43357  43243  115  1  1   83  113     9 0.706   3.38
 2.00 Prom -  48793  48754   40                              -4.95

 3.04 PlyA -  48962  48957    6                               1.05
 3.03 Term -  58224  57989  236  1  2  115   50    75 0.609   1.90
 3.02 Intr -  66190  66122   69  2  0   30  121    58 0.081   1.54
 3.01 Init -  74434  74227  208  1  1   30   88   162 0.798   9.43
 3.00 Prom -  77426  77387   40                              -6.95

 4.00 Prom +  82176  82215   40                              -3.65
 4.01 Init +  87425  87504   80  1  2   33   85    98 0.317   4.59
 4.02 Intr +  99976 100110  135  1  0    8   76   127 0.103   2.26
 4.03 Intr + 101095 101196  102  1  0   62  108    52 0.886   2.97
 4.04 Intr + 101299 101360   62  1  2   64  101    84 0.998   4.76
 4.05 Intr + 101910 102076  167  1  2  122   94    78 0.999  10.56
 4.06 Term + 102331 102525  195  0  0   97   44   150 0.994   7.93
 4.07 PlyA + 103175 103180    6                               1.05

 5.00 Prom + 110880 110919   40                              -5.15
 5.01 Init + 120413 120772  360  1  0   71   42   151 0.342   5.92
 5.02 Term + 128640 128753  114  2  0   46   43   154 0.537   4.29
 5.03 PlyA + 129163 129168    6                               1.05

 6.00 Prom + 130984 131023   40                              -5.25
 6.01 Init + 132524 132598   75  1  0   64   94    27 0.596   2.04
 6.02 Term + 133134 133274  141  2  0   81   41   129 0.970   4.45
 6.03 PlyA + 133996 134001    6                               1.05

 7.00 Prom + 135951 135990   40                              -6.95
 7.01 Init + 138713 138787   75  1  0   66  100    82 0.435   8.34
 7.02 Intr + 141462 141613  152  2  2  110   61    53 0.467   2.84
 7.03 Intr + 148823 148932  110  2  2   17   59   125 0.458   1.51
 7.04 Term + 154911 155020  110  1  2   97   47    87 0.744   3.19
 7.05 PlyA + 155187 155192    6                               1.05

 8.04 PlyA - 156442 156437    6                               1.05
 8.03 Term - 166537 166474   64  0  1  102   43    36 0.318  -3.12
 8.02 Intr - 167239 167135  105  0  0   60   87    92 0.634   4.71
 8.01 Init - 174285 174215   71  0  2   71  106    59 0.736   6.57
 8.00 Prom - 177911 177872   40                              -6.55

 9.03 PlyA - 178189 178184    6                               1.05
 9.02 Term - 182790 182132  659  1  2   31   54   260 0.006  10.02
 9.01 Intr - 199496 199367  130  2  1   85   84    32 0.081   1.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  71884  71724  161  2  2   31   54   124 0.946   0.42
S.002 Init + 177644 177747  104  1  2   68   89    67 0.804   4.57
S.003 Intr + 181916 182024  109  2  1   72   84    99 0.931   7.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_1|193_aa
MQALRVPDSRTWPLDGISGLALCQKGAHCPEGGAATKMQIFVKTLMGKTITLEVELSDTI
DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKK
SYTTPRKNKHKRKKVKLALLKYYKVDENGKISCLHRECPSDECGAGVFMASHFDRHYCGK
CCLTYCFNKPEDK

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_1|582_bp
atgcaggctcttagggttcctgattccaggacttggcccttggatggcatttctggactt
gccctgtgccagaagggagcccattgccctgaaggtggagccgccaccaaaatgcagatt
ttcgtgaaaacccttatggggaagaccatcaccctcgaggttgaactctcggatacaata
gataatgtaaaggccaagatccaggataaggaaggaattcctcctgatcagcagagactg
atctttgctggcaagcagttggaagatggacgtactttgtctgactacaatattcaaaag
gagtctactcttcatcttgtgttgagacttcgtggtggtgctaagaaaaggaagaagaag
tcttacaccactcccaggaagaataagcacaagagaaagaaggttaagctggctctcctg
aaatattataaggtggatgagaatggcaaaattagttgccttcatcgagagtgcccttct
gatgaatgtggtgctggggtgtttatggcaagccactttgacagacattattgtggcaaa
tgttgtctgacttactgtttcaacaaaccagaagacaagtaa

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_2|216_aa
MSNSFSISHNSILFSWLCVRNGWVLGLTDFKNKAADLYAIKSSKSAAVHSSHPESFASPS
GFMVSLASGVKLQTFVVTVTAHKGGTNPKKTVKALELFFLEYEYSDKQAQCKISLYRSSS
KPNYFPKTPSQFSSHWELGLQLTDFCRDTIASTAVSEHKDLSPYTFVITQSSLLSLWEQL
LDLRIGPPQQNGDVLIPGWQENMVVHGKPVAGVVSI

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_2|651_bp
atgagcaattccttttctatcagtcataactccatccttttctcatggttgtgtgtccgg
aatgggtgggttcttggtcttactgacttcaagaataaagctgcggacctttacgctatt
aaaagcagcaagtctgcagctgttcattcctcccatccagagtcgtttgcctctcccagt
gggttcatggtctcgctggcttcaggagtgaagctgcagacctttgtggtgactgttaca
gctcacaaaggcggcacgaacccaaagaaaacagtcaaagctcttgagctcttcttcctt
gagtacgagtacagtgacaaacaggcccaatgcaaaattagtctttaccggagctcatct
aaacctaattactttccaaagactccatcccagttctcatcacattgggaattagggctt
caacttacagatttttgcagggatacaattgcgtctacagctgtgtctgagcacaaagac
ctctctccctatacctttgttataactcagagctctctcctttctctgtgggagcaattg
ctggacctcaggattggacccccacagcaaaatggagatgtgctaattcctgggtggcag
gaaaatatggtagttcatgggaaacctgttgctggagtggtcagtatttga

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_3|170_aa
MKEFEQQPPTLDLPFDRDYPNEKEPVLLPTLVIEQGSLTPPHPHKIKLVRQQWIQTKKKS
LIYLKNNSGDFYKQEHNLTLKALLKETPTFRQGPHSKLWNGASYFKSHSFPFVFTSILIK
VLTRSILVICSSAEACFHVLLTLKLKARQRTSSEQFQQNCHCSVTLLEAI

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_3|513_bp
atgaaagaatttgaacaacagcctccaaccctagaccttccctttgacagagactaccca
aatgagaaggaaccagttctattaccaactctggtaatagaacaaggctctttaacaccc
ccacacccccacaaaatcaaactagttcgccagcaatggatccaaaccaagaagaaatcc
ctgatttacctgaaaaataattcaggagatttctacaaacaggaacacaatctcacccta
aaagcactgctaaaggagactccaacattcagacaaggaccacattcaaaactgtggaat
ggtgcatcatatttcaagtctcatagcttcccttttgtcttcacttccatcctcatcaag
gtccttactagaagcatcttggtcatttgttcctctgccgaggcttgttttcatgtgctg
ctgacactaaaacttaaggccaggcaaagaacctcctctgaacaattccagcagaactgc
cattgttccgtgaccctgctggaggcgatatag

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_4|246_aa
MLAEILELLIAAGISGQDVMAYQLLASRGSSGRTIMQSAMFLAVQHDCRPMDKSAGSGHK
SEEKREKMKRTLLKDWKTRLSYFLQNSSTPGKPKTGKKSKQQAFIKPSPEEAQLWSEAFD
ELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAP
KEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKPQIT
TEPHAT

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_4|741_bp
atgttggctgaaattctggagctcttaattgctgctggtatttcaggacaagacgtaatg
gcttatcagcttttggcaagccggggctccagcgggagaacgataatgcaaagtgctatg
ttcttggctgttcaacacgactgcagacccatggacaagagcgcaggcagtggccacaag
agcgaggagaagcgagaaaagatgaaacggacccttttaaaagattggaagacccgtttg
agctacttcttacaaaattcctctactcctgggaagcccaaaaccggcaaaaaaagcaaa
cagcaagctttcatcaagccttctcctgaggaagcacagctgtggtcagaagcatttgac
gagctgctagccagcaaatatggtcttgctgcattcagggcttttttaaagtcggaattc
tgtgaagaaaatattgaattctggctggcctgtgaagacttcaaaaaaaccaaatcaccc
caaaagctgtcctcaaaagcaaggaaaatatatactgacttcatagaaaaggaagctcca
aaagagataaacatagattttcaaaccaaaactctgattgcccagaatatacaagaagct
acaagtggctgctttacaactgcccagaaaagggtatacagcttgatggagaacaactct
tatcctcgtttcttggagtcagaattctaccaggacttgtgtaaaaagccacaaatcacc
acagagcctcatgctacatga

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_5|157_aa
MGKDFMTKTPKEMATMAKIDKWDLIKLKPFCTAKQTIIRVNRQRIEWEKIFAIYPSDKGL
ISRIHKELKQIYKKKTNNPIKKWAKDMNRHFSKQDIYVANNHMEKSSSSLVIREMQIKTT
DTCRLPVEQAQIGPKEYSREQLQPTTNGSSGINIPVG

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_5|474_bp
atgggcaaagacttcatgactaaaacaccaaaagaaatggcaacaatggccaaaatagac
aaatgggatctaattaaactaaaacccttctgcacagcaaaacaaactatcatcagagtg
aacaggcaacgtatagaatgggaaaaaatttttgcaatctacccatctgacaaagggcta
atatccagaatccacaaggaacttaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggcaaaggatatgaacagacacttctcaaaacaagacatttatgtggccaac
aaccatatggaaaaaagctcatcatcattggtcattagagaaatgcaaatcaaaaccaca
gacacatgtcgtttgcctgtggagcaagcccaaattggtccaaaggaatactcccgggag
caacttcaacctacgactaatggaagttcaggtataaatatacccgttggatag

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_6|71_aa
MAFEFGLELGVGVLPVEVREREKELRTYINRMEISSLAAVRKDAPERRDAKTKCRRLKNN
PGNMKSKKMYL

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_6|216_bp
atggcatttgagtttggccttgaattaggggtaggagttctcccagtggaagtaagggag
agagaaaaagagctaaggacttacataaacagaatggaaatatcaagtctggcagcagtc
cgtaaggatgcaccggaaagaagagatgctaagactaaatgtagaagacttaagaacaat
cctggcaacatgaaatccaaaaaaatgtatttgtaa

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_7|148_aa
MGGVQFHTGWLKKASQKGDTGDLKKFHPLLIILLSNPVKSNSRIWIGGGGRVHERWGEEG
CDYERELRNEERRVCNSLRTGHDDNGGFVEWKGGKGGERIERLDGCRVCVERDTEETKTS
QDHPMPGRDLSCMEIISQYDHPLLEEHL

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_7|447_bp
atggggggagtacaatttcatactggatggttaaagaaggcctctcagaaaggagacact
ggagacttgaagaagttccacccactcctcatcattctcctcagcaatcctgtcaaaagt
aatagtagaatatggattggagggggtggaagagtacatgagaggtggggagaggaagga
tgtgattatgaaagggagctgagaaacgaggagagacgtgtttgcaactcattgagaacg
ggccatgatgacaatggcggttttgtggaatggaaaggggggaaaggtggggaaaggatt
gagagattggatggttgccgtgtctgtgtagagagagacactgaggagacgaagacaagc
caagatcatcctatgcctggaagagatctcagttgtatggaaataatcagccaatatgac
cacccacttctggaagagcatctctaa

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_8|79_aa
MDQYWSVARRVGSPLLNPYKNSAKGKVLKEILIVKDPWSNGHIFQLGFLVGIQLLSVEKL
RSKAQFRSLILTQPSYYFD

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_8|240_bp
atggaccagtactggtcagtggcccggagggtggggtcccctctgctaaatccttacaaa
aattctgcaaaagggaaagttcttaaagagattctaatagtcaaagatccatggagcaac
ggacacatctttcagttaggatttctggttggaatccagttgcttagtgttgaaaaatta
agatcaaaggcacagttcaggtcacttatcctcactcaaccgagctactattttgattag

>gi568815597f:192709072_192911593|GENSCAN_predicted_peptide_9|262_aa
GSDFKHLRLSTWAFLLAHAWSSPGKIGAMALRVDLSQQRKELESAATQTIAVDLGFLLQG
AGSSLTWAQLQLPTWLQAQVSLHSLEPGKAPMPLDAQKCLFPLPNFSLLWVPAGISQQRQ
GEPGCHEHLWEADRFLGRGGGPSKAPPSGQGGLEGWGLGCYSTVQSGDLWCLFQQPMAAY
GPIGMHFLPSEAHKSPGLSQSRAEDGDHRMTSCREELPSLLRAGMISCREELPSLLRASE
TCRGTGTTSCREEPPNPGPPLC

>gi568815597f:192709072_192911593|GENSCAN_predicted_CDS_9|789_bp
ggttctgacttcaagcacctgagactctctacctgggcctttcttttggcccatgcctgg
agcagtccaggaaagattggagctatggccttgagagtagacctcagccaacaaaggaag
gagttggagtctgcagccacccaaactatagctgtagacctgggcttcctgctccaggga
gcaggaagcagcctgacctgggcgcagctacagctgcccacatggctgcaggctcaggta
tctctgcactctttggagcccgggaaggccccaatgcctttggatgctcagaagtgcctc
ttcccactgcctaacttctccctcctgtgggtgcctgctgggatctcacagcaaagacag
ggggagcctgggtgtcatgaacatctgtgggaggcagacagattcctgggcagagggggt
ggtcccagtaaggccccaccttcaggccagggaggtcttgaaggctgggggttgggctgc
tattccactgtccagagtggggacttgtggtgccttttccagcagcccatggctgcctat
ggaccaatcggcatgcacttccttccctctgaggcccataaaagccctggtctcagccag
agcagggcagaggatggagaccacaggatgaccagctgcagagaggagctaccttctctt
ctaagagctgggatgatcagctgcagagaggaactaccttctctgctgagagcttcagag
acctgcagaggcactgggactaccagctgcagagaggagccaccaaatccagggcctcct
ctctgctga