GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:20:47

Sequence gi568815575f:23567571_23786332 : 218762 bp : 43.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3306   3318   13  2  1  102  127    -2 0.740   5.21
 1.02 Term +   5050   5240  191  2  2   76   38   104 0.501   1.81
 1.03 PlyA +   5322   5327    6                               1.05

 2.00 Prom +   8892   8931   40                              -3.06
 2.01 Sngl +  24664  25191  528  0  0   60   42   195 0.657   8.16
 2.02 PlyA +  26087  26092    6                               1.05

 3.00 Prom +  37847  37886   40                              -4.26
 3.01 Init +  41840  41987  148  1  1   52   82   108 0.648   6.85
 3.02 Intr +  58238  58339  102  0  0   70   95    37 0.227   2.75
 3.03 Intr +  67831  67923   93  2  0  102   77    23 0.583   2.54
 3.04 Term +  69159  69319  161  1  2   71   54    73 0.447   0.30
 3.05 PlyA +  70918  70923    6                               1.05

 4.02 PlyA -  74770  74765    6                               1.05
 4.01 Sngl -  79936  78935 1002  1  0   86   37   285 0.770  20.15
 4.00 Prom -  81835  81796   40                              -4.96

 5.03 PlyA -  82004  81999    6                               1.05
 5.02 Term -  83145  82858  288  0  0 -104   54   344 0.630   7.18
 5.01 Init -  84671  84411  261  2  0   63   50    98 0.593   0.57
 5.00 Prom -  92145  92106   40                              -4.36

 6.00 Prom +  94617  94656   40                              -5.66
 6.01 Init +  96950  97148  199  1  1  105   82   131 0.978  11.59
 6.02 Intr +  99939 100241  303  1  0   14   39   346 0.910  18.86
 6.03 Intr + 103959 104076  118  1  1   36   78   141 0.883   7.42
 6.04 Intr + 114826 114956  131  1  2  113   77    89 0.943  10.64
 6.05 Intr + 116101 116135   35  2  2  101   98    16 0.856   1.84
 6.06 Term + 118715 118765   51  1  0  102   54    37 0.746  -0.87
 6.07 PlyA + 118803 118808    6                               1.05

 7.11 PlyA - 119086 119081    6                               1.05
 7.10 Term - 124266 124126  141  0  0   76   54    34 0.303  -3.27
 7.09 Intr - 124711 124463  249  1  0   33  119    91 0.042   4.33
 7.08 Intr - 129953 129916   38  0  2   79   79    17 0.031  -2.12
 7.07 Intr - 137274 137124  151  0  1   60  107    79 0.782   6.74
 7.06 Intr - 137510 137423   88  1  1   86   96    26 0.763   3.17
 7.05 Intr - 139169 139058  112  0  1   96   78    77 0.918   6.94
 7.04 Intr - 155183 155100   84  0  0   87  111    59 0.842   7.89
 7.03 Intr - 162994 162957   38  0  2  101   69    23 0.823  -0.39
 7.02 Intr - 163416 163246  171  2  0   99   87    68 0.590   6.86
 7.01 Init - 168342 168284   59  0  2   95   71    42 0.630   3.98
 7.00 Prom - 185656 185617   40                              -5.86

 8.00 Prom + 190530 190569   40                              -5.06
 8.01 Init + 197915 198035  121  1  1   53   55    50 0.786  -1.45
 8.02 Intr + 198365 198494  130  0  1   65   84    67 0.903   3.75
 8.03 Intr + 198910 199072  163  1  1   82  100    83 0.844   8.88
 8.04 Intr + 215743 215847  105  0  0   30   69    93 0.042   2.01
 8.05 Intr + 216088 216139   52  0  1  102   86    14 0.946   1.08
 8.06 Intr + 216230 216313   84  0  0  108   86    60 0.965   7.59
 8.07 Intr + 217758 217859  102  1  0   74   80   115 0.966   9.45
 8.08 Intr + 217950 217990   41  1  2  121   91    15 0.999   3.04
 8.09 Term + 218116 218286  171  0  0   94   55   125 0.991   7.63
 8.10 PlyA + 218326 218331    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 215782 215847   66  0  0   81   69    76 0.885   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_1|67_aa
MRPYVLEVLARAIRQEKEIKDIQISKEEVKLSLFADDMIIYLKNPKDSSRKLLELMKRIQ
QSLWMQD

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_1|204_bp
atgaggccttacgtactggaagtcctagccagagcaatcagacaagagaaagaaataaag
gacatccaaatcagtaaagaagaagtcaaactgtcactgtttgctgacgatatgatcatt
tacctcaaaaaccctaaagactcctccagaaagctcctagaactgatgaaaagaattcag
caaagtctctggatgcaagattaa

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_2|175_aa
MWKQLWNWVTDRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNADNDMDNEIQAEVVSGG
HEKLVENWSKSDSCYVLAKRLVAFCPCPRDLWNFELERDDLGYLVEEISKQQSIQEVTWV
LLKAFSFKRETEQKQEQEGDSKMPYSFKPPDLMRDLRQGQHQGDGAKPFMRNPPP

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_2|528_bp
atgtggaagcaactttggaactgggtaacagacagaggttggaacagtttggagggctca
gaagaagacaggaaaatgtgggaaagtttggaacttcctagagacttgttgaatggcttt
gaccaaaatgctgataatgatatggacaatgaaatccaggctgaagtggtctcaggtgga
catgagaaacttgttgagaactggagcaaaagcgactcttgttatgttttagcaaagaga
ctggtggcattttgcccctgccctagggatttgtggaactttgaacttgagagagacgat
ttagggtatctggtggaagaaatttctaagcagcaaagcattcaagaggtgacttgggtg
ctgttaaaagcattcagttttaaaagggaaacagagcaaaagcaggagcaagagggagac
agcaagatgccatactcttttaaaccaccagatctcatgagagatctgcggcaaggacag
caccaaggggatggtgctaagccattcatgagaaatccacccccatga

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_3|167_aa
MTEDEGEHDWYKCSSFNNLHSKPWSQRDKDINVSLTYEENLGLELLLPEALFWWWMGSTK
PPSQKTTEKMKNCLIKTFQGGYVELQVLPEEMSRPPATDFSPLPLPFLLGATHGGMGSAV
YPGGCPKDKGSQVTCSSEPETRLPGATAIDSNPAPITSRTAGQLNAP

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_3|504_bp
atgacagaagatgaaggagagcatgactggtacaagtgcagcagcttcaataaccttcac
tcaaaaccttggagtcagagggacaaagacattaatgtctcactcacatatgaagagaat
ctggggctggaactgctcctgccagaagcactattctggtggtggatgggcagcacaaag
cccccatcccaaaagaccacggagaagatgaaaaactgcctcataaaaacttttcaagga
ggatacgtagaattgcaagttttacctgaggaaatgtccaggccccctgctacagacttt
agccccttgcccttgcctttccttctaggggctacacatggtggaatgggcagtgcagtg
tacccaggaggctgccccaaagacaaagggagccaagtcacatgctcctcagagcctgaa
actcgcctgcctggagccacagccattgacagcaaccctgctcccatcaccagcaggact
gcaggacaattaaatgcaccctga

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_4|333_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRACISKTILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQLNRTEPSEITPHVYNHLIFDKPDKNKQWGKDSLFNK
WSWENWVAIWRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTGKETTIRVNRQPTEWEKMFAIYSSDKGLISRIY
IELKQIYKKKSNNPINKWAKDMNKHFSKEDIYAANRHMKKCSSSLAIREMQIKTTKRYHL
TPVRMAIIQKVRKQQVLERTWRNRNTFTLLVGL

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_4|1002_bp
atggccatactgcccaaggtaatttatagattcaatgctatccccatcaagctgccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgtatttccaagacaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaattgaacagaacagagccctcagaaataacaccacacgtgtacaaccat
ctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaa
tggtcctgggaaaactgggtagccatatggagaaagctgaaactggaccccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagaccaaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacaggaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaatgtttgcaatctactcatctgacaaagggctaatatccagaatctac
atagaactcaaacaaatttacaagaaaaaatcaaacaaccccatcaacaagtgggcaaag
gatatgaacaaacacttctcaaaagaagacatttatgcggccaacagacacatgaaaaaa
tgctcgtcatcactggccatcagagaaatgcaaatcaaaaccacaaagagataccatctc
acaccagttagaatggcgatcattcaaaaagtcaggaaacaacaggtgctggagaggacg
tggagaaataggaacacttttaccctgttggtgggactgtaa

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_5|182_aa
MQIVQTWRCTLSQGYHCSWAAVDPFSVYGLVNPVHTADVEFFEITVSWTGLIFGFTNHMQ
LHIGATFTANSTPCNELFNSHTIPRQQTENDFDELREEGFRRSNFSELKEKVRTQRKEVK
NLEKRLDEWVTRITSAEKSLNDLIELKTMARELRDECTSFSSQFDQLEERVSVLEDQMNE
MK

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_5|549_bp
atgcagatagttcagacctggcgctgtaccctttctcaaggttaccactgttcatgggct
gcagtagatcccttttctgtgtatggccttgtcaatcctgtgcacacagcagatgtggaa
ttctttgaaataactgttagttggactggtttaatatttggattcaccaaccacatgcag
ttacacattggtgcaacctttacagcaaacagtactccctgcaatgaactatttaattca
catactatccccagacagcagacagagaatgactttgacgagttgagagaagaaggcttc
agacgatcaaacttctccgagctaaaggagaaagttcgaacccaacgcaaagaagttaaa
aaccttgaaaaaagattagacgaatgggtaactagaataaccagtgcagagaagtcctta
aatgacctgattgagctgaaaaccatggcacgagaactacgtgatgaatgcacaagcttc
agtagccaatttgatcaactggaagaaagggtatcagtgctggaagatcaaatgaatgaa
atgaagtga

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_6|278_aa
MDHRSRLRGTGLNRIPGTQSRAPRVPLPFHVQQEAREGEDWEREPPRQRPPIYEPPESEE
LPDNVMAARRRQKRRSRQGTCFCARVVMEALPLLAATTPDHGRHRRLLLLPLLLFLLPAG
AVQGWETEERPRTREEECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAV
IDGEFKELKLTDYRGKYLVFFFYPLDLGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQ
AFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_6|837_bp
atggatcaccgaagccgactacggggcacaggcctgaaccgaatccctgggactcagtcc
cgagccccccgagtcccactccccttccacgtgcaacaggaggccagggaaggagaagac
tgggagcgagagccacctcgtcagaggcctcctatctatgagccaccagaaagtgaagag
ctgccagataatgttatggctgcccggcggcggcagaagcggcgctcgcgccaagggacg
tgtttctgcgctcgcgtggtcatggaggcgctgccgctgctagccgcgacaactccggac
cacggccgccaccgaaggctgcttctgctgccgctactgctgttcctgctgccggctgga
gctgtgcagggctgggagacagaggagaggccccggactcgcgaagaggagtgccacttc
tacgcgggtggacaagtgtacccgggagaggcatcccgggtatcggtcgccgaccactcc
ctgcacctaagcaaagcgaagatttccaagccagcgccctactgggaaggaacagctgtg
atcgatggagaatttaaggagctgaagttaactgattatcgtgggaaatacttggttttc
ttcttctacccacttgatttaggtctcttcattattgatgacaaaggaatcctaagacaa
attactctgaatgatcttcctgtgggtagatcagtggatgagacactacgtttggttcaa
gcattccagtacactgacaaacacggagaagtctgccctgctggctggaaacctggtagt
gaaacaataatcccagatccagctggaaagctgaagtatttcgataaactgaattga

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_7|376_aa
MVSLFDAYVVKNLVLLLFERDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLG
SEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIVNK
GRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPNGSRPFVVAVDDIMFQKPVEVGSLLF
LSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGAIFLEG
SVVSLKVSCLSNEVSIKGPRGPGTQNFWTAELVKACRKVNKNSPMCWDDGAPQLHGNRSS
RAQDPSRPRPMCLFIWVFIRILQNILHKKLVDSIRIELDQKIPGWCPLQNCLPVGGENPY
TLHIWSQKSSVLIVVM

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_7|1131_bp
atggtgtctctgtttgatgcctatgtggtgaaaaaccttgttttacttttatttgaaaga
gaccatgtgaaggcaatggaagaaaggaaattacttcatagtttcttggctaaatcacag
gatggactgcctcctaggagaatgaaggacagttatattgaagttctcttgcctttgggc
agtgagcctgaattacgagagaaatatttgactgttcaaaacaccgtaagatttggcagg
attcttgaggatcttgacagcttgggagttcttatttgttacatgcacaacaaaatccac
tccgccaagatgtctcctttatcgatagttacagccctggtggataagattgtgaacaag
gggagaagaattgccttcagctccacgtcgttactgaaaatggcccccagcgctgaggag
aggaccaccatacatgagatgtttctcagcacactggatccaaatggttctcgaccgttt
gtggtagcagtagatgacatcatgtttcagaaacctgttgaggttggctcattgctcttt
ctttcttcacaggtatgctttactcagaataattatattcaagtcagagtacacagtgaa
gtggcctccctgcaggagaagcagcatacaaccaccaatgtctttcatttcacgttcatg
tcggaaaaagaagtgccattggttttcccaaaaacatatggagccattttcttggaggga
tcagtggtgtcactgaaggtgtcatgcctatccaatgaagtctccataaaaggcccaaga
ggaccaggtacgcagaacttctggacagctgagctggtgaaggcttgcaggaaggtgaac
aagaattcacccatgtgttgggatgatggtgcaccccaactccacgggaatagaagctcc
cgtgctcaggacccttccagacctcgccctatgtgcctcttcatctgggtgtttattcgt
atccttcaaaatatccttcataagaaactggtggacagcatcagaattgaattggatcag
aagattcctggctggtgtccactgcagaattgcttgcctgttggtggggaaaatccctac
accctacacatttggtcacagaagtcttctgtattgattgttgtcatgtga

>gi568815575f:23567571_23786332|GENSCAN_predicted_peptide_8|322_aa
MATPQVEQPVDHFQSIGTALTSERNDGIAVPQLYQLDSPTTRKLCDQWCLCLSFDQARQT
CSTDVAWQAVLSSCYQPGFHACRGPAIQWVLSSRPTSRKNEVRGQLEGEQGGEEPYRVTE
QLSGNLKWVAPFRRQVVPGPGPQREEKQKTKMAKFVIRPATAADCSDILRLIKELAKYEY
MEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLL
YLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLS
SEEGWRLFKIDKEYLLKMATEE

>gi568815575f:23567571_23786332|GENSCAN_predicted_CDS_8|969_bp
atggctactccacaggtagagcagccagtagaccattttcaaagcattgggacagctctc
acctcagaaagaaatgatggtattgcggtgcctcagctctaccaactagattcaccaacc
actagaaagctctgtgaccagtggtgcctttgcctgagttttgatcaggcccgccagact
tgttccactgacgtggcctggcaggctgtgctcagctcatgctaccagccaggattccac
gcctgccgaggtcccgccattcagtgggtcctgagttctcgtcccacatccaggaagaat
gaggtacgcggacaactagagggtgagcaaggcggagaggagccttatcgagtgacagaa
cagctctcgggaaacttgaagtgggtagctcctttccgcaggcaggttgtcccagggcct
ggtccgcaaagggaagaaaagcaaaagacgaaaatggctaaattcgtgatccgcccagcc
actgccgccgactgcagtgacatactgcggctgatcaaggagctggctaaatatgaatac
atggaagaacaagtaatcttaactgaaaaagatctgctagaagatggttttggagagcac
cccttttaccactgcctggttgcagaagtgccgaaagagcactggactccggaaggacac
agcattgttggttttgccatgtactattttacctatgacccgtggattggcaagttattg
tatcttgaggacttcttcgtgatgagtgattatagaggctttggcataggatcagaaatt
ctgaagaatctaagccaggttgcaatgaggtgtcgctgcagcagcatgcacttcttggta
gcagaatggaatgaaccatccatcaacttctataaaagaagaggtgcttctgatctgtcc
agtgaagagggttggagactgttcaagatcgacaaggagtacttgctaaaaatggcaaca
gaggagtga