GENSCAN 1.0	Date run: 21-Sep-117	Time: 11:32:15

Sequence gi568815593f:118873796_119074122 : 200327 bp : 39.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1900   2089  190  1  1   49   48   176 0.613   5.64
 1.02 PlyA +   2725   2730    6                               1.05

 2.02 PlyA -   6892   6887    6                               1.05
 2.01 Sngl -   9084   8551  534  0  0   71   48   303 0.864  20.42
 2.00 Prom -  29108  29069   40                              -3.55

 3.00 Prom +  32229  32268   40                              -5.35
 3.01 Init +  35468  35520   53  1  2   93   36    57 0.223   1.69
 3.02 Intr +  49953  50010   58  0  1   54   53    68 0.335  -2.13
 3.03 Intr +  50464  50605  142  0  1   53   45   130 0.366   4.21
 3.04 Intr +  52455  52610  156  1  0   42   78    83 0.687   1.76
 3.05 Intr +  53152  53354  203  2  2   57   74    99 0.765   3.48
 3.06 Term +  72500  72643  144  1  0   82   43   166 0.637   8.43
 3.07 PlyA +  72741  72746    6                               1.05

 4.00 Prom +  72938  72977   40                              -4.75
 4.01 Init +  73549  73620   72  0  0   74   53   113 0.336   7.52
 4.02 Intr +  78206  78340  135  1  0   98   77    57 0.119   5.44
 4.03 Term +  84984  85247  264  2  0   52   48   163 0.144   3.22
 4.04 PlyA +  85321  85326    6                               1.05

 5.00 Prom +  86181  86220   40                              -3.95
 5.01 Init +  88802  88885   84  1  0   25  103    43 0.235   0.37
 5.02 Intr +  95556  95730  175  2  1   30   64   137 0.215   4.09
 5.03 Term +  96806  97029  224  0  2   22   50   171 0.462   2.80
 5.04 PlyA +  97476  97481    6                               1.05

 6.00 Prom +  97644  97683   40                              -6.15
 6.01 Sngl + 100001 100330  330  1  0   81   42   720 0.999  62.47
 6.02 PlyA + 100978 100983    6                               1.05

 7.04 PlyA - 100996 100991    6                               1.05
 7.03 Term - 101542 101031  512  2  2  -68   42   305 0.022   3.85
 7.02 Intr - 109553 109435  119  1  2   -1   43   137 0.007  -0.51
 7.01 Init - 114980 114499  482  2  2   55   60   440 0.148  32.48
 7.00 Prom - 118618 118579   40                              -3.65

 8.03 PlyA - 118815 118810    6                              -1.95
 8.02 Term - 120168 118826 1343  1  2   67   39   418 0.946  25.47
 8.01 Init - 120398 120320   79  2  1   42   40    80 0.320  -0.13
 8.00 Prom - 122300 122261   40                              -4.95

 9.00 Prom + 129932 129971   40                              -5.75
 9.01 Init + 136033 136107   75  0  0  105   84   116 0.911  12.85
 9.02 Term + 136256 136405  150  1  0    7   48   133 0.611  -1.87
 9.03 PlyA + 136661 136666    6                               1.05

10.07 PlyA - 137068 137063    6                               1.05
10.06 Term - 138064 137903  162  1  0    9   44   162 0.026   0.85
10.05 Intr - 148303 148255   49  0  1  106   89    -3 0.089  -0.64
10.04 Intr - 150842 150690  153  1  0   73   60    83 0.642   2.27
10.03 Intr - 151508 151372  137  2  2   16   84   149 0.047   5.75
10.02 Intr - 169080 169024   57  0  0   93   71    67 0.287   3.66
10.01 Init - 197912 197238  675  2  0   80   48   446 0.008  33.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 151436 151372   65  2  2   82   84    83 0.900   7.97
S.002 Sngl - 197912 197193  720  2  0   80   47   457 0.956  34.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_1|63_aa
XSIQIYKASSQRPSRRLRLPHNNSGDFNTPRTILHRSRQKTNKDIKDLNSALDRTDPTGI
HSL

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_1|192_bp
nngagcatccagatttataaagcaagttctcagagaccttcaaggagacttagacttcca
cacaataatagtggagactttaacaccccacggacaatcttacacagatcaagacaaaaa
actaacaaagatattaaggacctgaactcagcactggatcgaacggacccaacgggtatc
cactctctgtga

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_2|177_aa
MGKVSPGHVRYLRGRLSYEWFCGLAPGPCCSVQPQGLVPCAPKLHLQPLLKGRLRYSSEH
CFRGCKPQALAISMCLGPAGVQKSRVELWEPRFQRMYGNDWMYRQKSAAGAEPSWRTSAK
AVQKGNVGLEPPHRVPSGALPSGALKRGPLSSRPQNVDPLTACTMHLEKPQILNASP

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_2|534_bp
atggggaaagtgtctccagggcatgtcagatatcttcgtggcagactttcctatgaatgg
ttttgtgggctggccccagggccctgctgctctgtgcagcctcagggcttggtgccctgt
gccccgaagctccatctccagccattgctaaagggtaggctaaggtacagctcagaacat
tgtttcagagggtgcaagccccaagctttggcaatttccatgtgccttgggcctgcaggt
gtgcagaagtcaagagttgagttatgggagcctagatttcaaaggatgtatggaaacgac
tggatgtacaggcagaagtctgctgcaggtgcagagccctcatggagaacctctgctaag
gcagtgcagaagggaaatgtgggtttggagcccccacacagagtccccagtggagcactg
cctagtggagctctgaaaagagggccactgtcctcaagaccccagaatgtagatccactg
acagcttgcaccatgcacctggaaaagccacagatactcaatgccagcccatga

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_3|251_aa
MEKLNSTALGVTADAPQFLSLRRQGLKLLQTRTDVLLIISSTGKKSIHKRKSDQNKEKHT
PKTELPENQIQQSLKPLLLTLNLTATWMELEAIILSEVTQEWKTKFRYVLTYKWELSYED
AKMYIINFGDSGWKEGVLEAGKSESEHLHGHGPGESSLPGLQMEVFLLCPHMQRETEKER
ERDKERRRETESKKEVSLMSLLLKEYEEIFEMESLSVVTGVNTKEGQTPTDETGCNDKQI
EDCYKKGFLTQ

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_3|756_bp
atggagaaactcaactcaacagcccttggggtcactgcagatgccccacagtttctttct
ctgaggaggcaaggactgaagttgctgcagacccgcacagatgtgctgctgataatttcc
agtacaggaaagaagtccattcataagagaaaatcagaccaaaacaaagagaagcatacc
ccaaaaacagaactgcctgagaaccagatccagcaaagcctgaagcctctcctactcact
ctgaacctcaccgcaacttggatggaactggaggccattattctaagtgaagtaacccag
gaatggaaaaccaaattccgttatgttctcacttataagtgggagctaagctatgaggat
gcaaagatgtacataataaattttggggactctgggtggaaggagggagttctagaagct
gggaagtctgaatcagagcacctgcatggtcacggtcctggtgagagctctcttcctggc
ttgcaaatggaagtcttcttgctgtgtcctcacatgcagagagagacagagaaagagaga
gagagagacaaagagagacggagagagacagagagcaaaaaggaagtatctctcatgtct
cttcttctaaaggaatatgaggagatttttgagatggaaagtctttctgtggtcacagga
gtaaacacaaaagagggacagacaccaactgatgaaacagggtgcaatgacaaacagatc
gaggactgctataagaaaggattcctcactcagtag

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_4|156_aa
MEDFIADESGSKREGELEEGWSRKKKKGTEIKGRERLKGGAEIERRKGLRDSERTEKTVK
RRRLPNLKLDTRMVQYTQINKCDSSHKENNKNHMIISIDAEKAFNKIQHPFMLKILNKLG
TKGTYLKIIRAIYAKPTANIILNGQKPKAFPLRTGT

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_4|471_bp
atggaggattttattgccgatgaaagtggctctaagcgggaaggagagctggaagaggga
tggagcaggaagaaaaagaaaggaactgaaattaagggaagggagagattgaaaggtggc
gcagaaattgaaaggagaaaggggttgagggatagtgagaggacagagaagacagtaaaa
agacgccgcttacccaatttaaaattggatacaagaatggttcaatatacgcaaatcaat
aaatgtgattcatcacacaaagagaacaacaaaaaccacatgatcatatcaatagatgca
gaaaaggctttcaataaaatccagcatcccttcatgttaaaaatcctcaacaaactaggc
actaaaggaacttacctcaaaataataagagccatctatgccaaacccacagccaacatc
atactgaacgggcaaaaaccaaaagcattccccttgagaactggaacatga

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_5|160_aa
MEKKKEVGLGSKNKRGNEKEKGEEKKGQVPDPVPPDWVRTPSRGSRHLLQEHSGQHLFSV
PLGQSSEKKEEAVTFAVLQPSPVISPARQANIQIQEIQGTPERYSTRRSTPRHVINRFSK
VKMKEKMLRAAREKRQVTYKEKSIRLKAKPSVETLLASRD

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_5|483_bp
atggagaagaaaaaggaagtgggattagggagtaaaaataaaagagggaatgaaaaggag
aagggagaggaaaagaagggacaggtccctgatcctgttccccctgactgggtgagaact
cccagtaggggctccagacaccttctacaggagcattcaggccaacatctgttcagtgtg
cccctgggacaaagctccgagaagaaagaggaggctgtcacctttgctgttttgcagcct
tcaccggtaatatctccagcaagacaagccaacattcaaattcaggaaattcagggaacc
ccagaaagatactccacgagaagatctaccccaagacacgtaatcaacagattctccaag
gtcaaaatgaaagaaaaaatgttaagggcagccagagagaaacgccaggtaacctacaaa
gagaagtccatcagactaaaagcaaaaccctcagtggaaaccctattagccagcagagat
tag

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_6|109_aa
MSDAAVDTSSEITTKDLQEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG
EEEEEEEGDGEEEDGDEDEEAETATGKRAAEDDEDDDVDTKKQKTDEDD

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_6|330_bp
atgtcagacgcagccgtagacaccagctccgaaatcaccaccaaggacttacaggagaag
aaggaagttgtggaagaggcagaaaatggaagagacgcccctgctaacgggaatgctaat
gaggaaaatggggagcaggaggctgacaatgaggtagatgaagaagaggaagaaggtggg
gaggaagaggaggaggaagaaggtgatggtgaggaagaggatggagatgaagatgaggaa
gctgagacagctacgggcaagcgggcagctgaagatgatgaggatgacgatgtcgatacc
aagaagcagaagaccgacgaggatgactag

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_7|370_aa
MTLLNLTSTPTLPTLAYPVLGERSHWARTNGLVPSQRQGGTSSLGFGDPPPVRGVRALRY
AARAGFYSAWRPPAAAGLQCHGLTGVSAMESQKEARTLQEPVARPSGASSSQTPNDKERR
EGGAVPAAAALGAEADDDSADGLWELPVEPAERRPECTRCRFLAFVTVGRSDSFRDHLPE
QQLVKLSIIGCARILGMISPAYTSISSQIDQAEERISEIEDKLNEIKREDKITEKRMKRN
EQSLQEIWDYVKRPNLCLIGVRESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQR
TPQRYSLRRATPRHIIIRFTKVEMKEKMLRAAREKGWVTHKGKPIRLTADLSAETLQARR
EWGPIFNILK

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_7|1113_bp
atgacgctacttaacctcaccagcactccaacactgcccacacttgcctacccagttcta
ggtgaacggtcccactgggcacggaccaatgggctcgttccttcccagcggcagggtggg
acctccagcctgggcttcggagacccgccccccgtacgtggcgtgcgggcattgcgctac
gcggcgcgggccggtttctacagcgcgtggcgccccccggcggcagccgggcttcaatgc
cacggcctgaccggagtgtccgccatggagtcgcagaaagaggcacgaacactccaggag
cccgttgcgcggccttctggggcctcaagctctcagacgccgaacgacaaggagcggcgg
gagggcggcgcagtgccggcggcggctgccctgggcgcagaggcggacgacgacagtgcg
gacgggctgtgggagctgccggtggagccggccgagcggaggcctgagtgcacccgctgc
agatttctggcttttgtgacagtgggaagatctgacagcttcagagaccaccttcctgag
cagcagttggttaagctcagtattattggctgtgcccgtatattgggcatgatctctcca
gcatacacaagtatcagtagccaaatcgatcaagcggaagaaaggatatcagaaattgaa
gataaactcaatgaaataaagcgtgaagacaagattacagaaaaaagaatgaaaaggaac
gaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggt
gtacgtgaaagtgatggggagaatggaaccaagttggaaaacactcttcaggatattatc
caggagaacttccccaacctagcaagacaggccaacattcaaattcaggaaatacagaga
acaccacaaagatactccttgagaagagcaaccccaagacacataatcatcagattcacc
aaggttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggttgggttacccac
aaagggaagcctatcagactaacagcagatctctcagcagaaactctacaagccagaaga
gagtgggggccaatattcaacattcttaaataa

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_8|473_aa
MIISIDAEKAFDKIQQLFMLKTLNKLVLEVLARAIRQEKEIKGIELGKEEVKLSLFADDM
IVYLENPIISAQNLLKLISNFSKVSGYKINVQKSQAFLYINNRQTESQIMSELPFTIASK
RIKYLEIQLTRDVKDLFKENYKPLLNEIKEDKNKWKNIPCSWIGRINIVKMAILPKVIYR
FNAIPIKLQMTFFTELEKTTLKFIWNQKRAHIAKTILSKKNKAGGIMLPEFKLYYKATVT
KTAWYWYQNRDIDQWNRTESSEIIPHIYNHLTFDKPDKNKQWGKDSLFNKWCWENWLAIC
RKLKLDLFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAMAT
KAKIDKWDLIKLKSFCTAKGTTSRVNRQPTEWEKISAIYPSDKGLVSRIYKELKQIYKKK
IKQPHQKVGKGYEQTLLKRRHLCSQKTHEKMLIITGHQRNGNQNHNEIPSHIS

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_8|1422_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagctcttcatgcta
aaaactctcaataaactagtgttggaagttctggccagggcaattaggcaggagaaagaa
ataaagggtattgaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatg
attgtatatttagaaaaccccatcatctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcgttcctatacatc
aataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctagaaatccaacttacaagggatgtgaaggacctcttcaaggagaac
tacaaaccactgctcaatgaaataaaagaggacaaaaacaaatggaagaacattccatgt
tcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacaga
ttcaatgccatccccatcaagctacaaatgactttcttcacagaattggaaaaaactact
ttaaagttcatatggaaccaaaaaagagcccacattgccaagacaatcctaagcaaaaag
aacaaagctggaggcatcatgctacctgagttcaaactatattacaaagctacagtaacc
aaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagagtcc
tcagaaataataccacacatctacaaccatctgacctttgacaaacctgacaaaaacaag
caatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgt
agaaagctgaaactggatctcttccttacaccttatacaaaaattaattcaagatggatt
aaagacttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcaatacc
attcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaaca
aaagccaaaattgataaatgggatctaattaaactaaagagcttctgcacagcaaaagga
actaccagcagagtgaacaggcaacctacagaatgggagaaaatttctgcaatctaccca
tctgataaagggctagtatccagaatctacaaagagcttaaacaaatttacaagaaaaaa
atcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaaga
catttatgcagccaaaaaacacatgaaaaaatgctcatcatcactggccatcagagaaat
ggaaatcaaaaccacaatgagataccatctcacatcagttag

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_9|74_aa
MGAMGMSHMLASFFDLDSMLIDMARDFNWEEAVQETKDGAANRKLTGECHFLWKSTRLQL
MTLAENIKVMLTEL

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_9|225_bp
atgggggctatggggatgagccacatgctggcctctttctttgacctggacagcatgctc
atcgacatggccagggacttcaattgggaagaagcagtccaggaaacaaaagatggtgcc
gccaatagaaaattgactggagaatgtcacttcctttggaaatctacacgtttacagctt
atgacactagcagaaaatatcaaagtcatgctcaccgaactttga

>gi568815593f:118873796_119074122|GENSCAN_predicted_peptide_10|410_aa
MTGKGRATGDARASLTHREALVANAAHGEAVVARVHSPGQHLVQVHVGALVLQRTPHPAH
ATGQRLLPSLLPSGAAAALRWRRQKQRQAPGAGAAQLGPATHPEPRRARPGGGGSARGRS
AALLRAPVTPRASPGEAQGPLTGHDPGPTHRPGRPRCPHTSSGPRAAAPDPARVAQAVRA
RTPRLTCPFPAPVPATPTVLRHSLRASGSLRPKYRETSLGAAATVWVNDVAMAMPVLIAL
ESGQIKDLKPKTIKTLEENLGSTIQDISMGKDFTTKTPKAIATKAKIDNWDMDEAGNHHP
QQTNTGTENQTPHVLTHKWELNNENTWTQGGEYHTPGPVRGFLQRTAIIWRDVVNKSQFY
FNHQYDHIQKDEEDDEVCEERTLKDPSGPQRKRWPLSAAHMKPAQQPLGM

>gi568815593f:118873796_119074122|GENSCAN_predicted_CDS_10|1233_bp
atgacgggcaaaggccgggccacgggcgacgcgagggcctccctcactcaccgtgaagcg
ctggtcgccaatgctgcccacggagaagcagtggtcgccagggttcacagccccggtcag
cacctggtgcaggttcatgtcggcgccctagtcctgcaacggacaccgcatccagctcat
gccacgggtcagcggctgcttccctccctccttccctcaggggcggcggccgctcttcgg
tggcgacggcagaagcagcgacaggcgcctggagccggagccgctcagctggggcccgcg
actcatcccgagccccggagggcgaggcccggagggggcgggtcggcgagagggcggagc
gccgcgctccttcgcgcacctgtcactccccgcgctagcccaggtgaagctcagggtccc
ctcaccggccacgacccggggccgactcaccggccaggaaggccgcgctgtccacacact
tcctctggacctcgggcagccgctcctgacccagcccgagtggcgcaagcagtacgcgct
cgcactccccgcctgacctgtcccttcccggctccggtgcccgccacccccacagtcctc
cgccactcactacgcgcctctggatccctgcggccgaaatatcgcgagacttcgctcggg
gcagctgctactgtgtgggtcaacgatgttgctatggcaatgccagtactcatagcacta
gaaagtggccagattaaagacttaaaacctaaaaccataaaaaccctagaagaaaaccta
ggcagtaccattcaggacatcagcatgggcaaagactttacgactaaaacaccaaaagca
attgcaacaaaagccaaaattgacaactgggacatggatgaagctggaaaccatcatcct
cagcagactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggag
ttgaacaatgagaacacatggacacagggaggggaatatcacacaccggggcctgtcagg
ggatttcttcagagaacagctataatttggagggatgtagtaaacaagtcacaattctat
ttcaaccatcaatacgatcatattcaaaaagatgaggaagatgacgaagtttgtgaagag
aggacactcaaggacccatccggcccacaaagaaagaggtggcctctgagtgcagcgcac
atgaagcctgctcaacagcctctgggcatgtga