GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:23:17

Sequence gi568815597r:205618283_205829624 : 211342 bp : 45.66% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   2556   1828  729  0  0   80   33   413 0.350  26.63
 1.04 Intr -   5609   5394  216  2  0   91   62   182 0.985  14.60
 1.03 Intr -   7882   7704  179  2  2   14   -1   182 0.504   1.54
 1.02 Intr -  12913  12810  104  0  2   99   53    68 0.854   4.22
 1.01 Init -  13533  13427  107  0  2   69   47   196 0.998  11.29
 1.00 Prom -  18802  18763   40                              -2.06

 2.05 PlyA -  19365  19360    6                               1.05
 2.04 Term -  41389  40952  438  1  0   97   43   321 0.984  23.78
 2.03 Intr -  43844  43579  266  0  2  135   78   355 0.996  36.43
 2.02 Intr -  45336  44551  786  1  0  133  116   850 0.953  83.75
 2.01 Init -  46374  46203  172  0  1   76   92   277 0.999  24.50
 2.00 Prom -  55444  55405   40                              -1.96

 3.06 PlyA -  56368  56363    6                               1.05
 3.05 Term -  60512  60379  134  0  2  110   40   103 0.808   5.95
 3.04 Intr -  69196  69104   93  2  0   80   81    67 0.459   5.14
 3.03 Intr -  72076  72032   45  2  0  122   88    -2 0.317   1.58
 3.02 Intr -  75063  75031   33  1  0  122   92    13 0.162   3.29
 3.01 Init -  85679  85667   13  2  1   81   61     1 0.020  -2.86
 3.00 Prom -  90297  90258   40                              -2.36

 4.07 PlyA -  91661  91656    6                               1.05
 4.06 Term - 100197  99998  200  1  2   91   42   163 0.997   9.56
 4.05 Intr - 101394 101245  150  1  0   70   91   169 0.996  15.53
 4.04 Intr - 102371 102219  153  0  0   50   36   209 0.978  11.94
 4.03 Intr - 105699 105644   56  2  2   73   67    82 0.917   3.22
 4.02 Intr - 109551 109418  134  0  2  -14   82   142 0.798   2.84
 4.01 Init - 111295 111290    6  1  0   61  111     0 0.609   0.57
 4.00 Prom - 113829 113790   40                              -4.36

 5.00 Prom + 116968 117007   40                              -2.66
 5.01 Init + 130751 130844   94  1  1   65   80    63 0.782   3.74
 5.02 Intr + 131168 131268  101  0  2   87   81     9 0.630  -0.07
 5.03 Term + 131682 132113  432  2  0   40   54   182 0.561   5.30
 5.04 PlyA + 135774 135779    6                               1.05

 6.06 PlyA - 136241 136236    6                               1.05
 6.05 Term - 152171 152060  112  1  1   85   39    89 0.986   1.73
 6.04 Intr - 152572 152451  122  1  2   81  107    41 0.591   4.59
 6.03 Intr - 153371 153190  182  0  2  116   95   193 0.999  22.39
 6.02 Intr - 154285 154214   72  2  0   19  103   103 0.934   4.28
 6.01 Init - 156674 156551  124  2  1   86   78   198 0.970  19.18
 6.00 Prom - 160023 159984   40                              -1.46

 7.12 PlyA - 160030 160025    6                               1.05
 7.11 Term - 173436 173251  186  0  0   92   33   161 0.991   8.49
 7.10 Intr - 176736 176588  149  1  2  110   87   168 0.940  18.85
 7.09 Intr - 177196 177062  135  2  0   98   57   168 0.983  15.24
 7.08 Intr - 178721 178642   80  1  2   79   77    41 0.964   1.29
 7.07 Intr - 179769 179622  148  1  1   95   96   149 0.999  15.69
 7.06 Intr - 180533 180387  147  0  0  101   35   259 0.814  22.11
 7.05 Intr - 180819 180675  145  0  1  106   86   243 0.971  25.76
 7.04 Intr - 181548 181477   72  0  0  108  110    89 0.997  12.70
 7.03 Intr - 182778 182671  108  0  0   61   73   111 0.990   7.38
 7.02 Intr - 192083 191788  296  0  2  117   91   339 0.979  33.83
 7.01 Init - 195132 194838  295  0  1   64   51   244 0.931  13.65
 7.00 Prom - 207035 206996   40                              -2.16

 8.02 PlyA - 209763 209758    6                               1.05
 8.01 Term - 210461 210338  124  1  1   86   51   135 0.748   7.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  52302  52394   93  2  0  109   72    61 0.912   6.76


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_1|445_aa
MRAAAGTRRARLGRRRLLRLRRGGRSGCRAVLEFPASLVIRCRVSFLFLFRSSGPPPLFT
FRLVHSCIEAGVAASQTVDTLVTVGNVEKEVFMVFLVELTHCGTGGQNDIVDKEKQGILS
SEMNSLLDQELIAMDSAITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGI
RKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYKFVSYPEILNMDPMTVGRIEGDCES
LNFSEVSSSSKDVENGGKDKPPQPGAKTSSRNDYIHSGLYSSFTLNSLNSSNVKLFKLIK
TENPAEKLAEKKSPQEPTPSVIKFVTTPSKKPPVEPVAATISIGPSISPSSEETIQALET
LVSPKLPSLEAPTSASNVMTAFATTPPISSIPPLQEPPRTPSPPLSSHPDIDTDIDSVAS
QPMELPENLSLEPKDQDSVLLEKDK

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_1|1335_bp
atgcgggcggctgcgggcacccggcgggctcggcttggccgccgccgccttctacggctc
cgccgcgggggtcgcagcggctgccgcgccgtcctcgagtttccagcctcgctagtcatc
cggtgtcgagtttcatttctttttctctttcgctccagcggccccccgcccctctttact
ttccgccttgtgcacagctgcatcgaggctggggtagcagcatcacagactgtagacact
ttggtcactgtaggcaacgtagagaaagaagtcttcatggtgttcctggtagagctgacc
cattgtggcactggtgggcagaatgacattgttgacaaagaaaaacaaggcatcctcagc
tcggagatgaattcgcttctggatcaagaactcattgctatggacagtgctatcaccctg
tggcagttccttcttcagctcctgcagaagcctcagaacaagcacatgatctgttggacc
tctaatgatgggcagtttaagcttttgcaggcagaagaggtggctcgtctctgggggatt
cgcaagaacaagcctaacatgaattatgacaaactcagccgagccctcagatactattat
gtaaagaatatcatcaaaaaagtgaatggtcagaagtttgtgtacaagtttgtctcttat
ccagagattttgaacatggatccaatgacagtgggcaggattgagggtgactgtgaaagt
ttaaacttcagtgaagtcagcagcagttccaaagatgtggagaatggagggaaagataaa
ccacctcagcctggtgccaagacctctagccgcaatgactacatacactctggcttatat
tcttcatttactctcaactctttgaactcctccaatgtaaagcttttcaaattgataaag
actgagaatccagccgagaaactggcagagaaaaaatctcctcaggagcccacaccatct
gtcatcaaatttgtcacgacaccttccaaaaagccaccggttgaacctgttgctgccacc
atttcaattggcccaagtatttctccatcttcagaagaaactatccaagctttggagaca
ttggtttccccaaaactgccttccctggaagccccaacctctgcctctaacgtaatgact
gcttttgccaccacaccacccatttcgtccataccccctttgcaggaacctcccagaaca
ccttcaccaccactgagttctcacccagacatcgacacagacattgattcagtggcttct
cagccaatggaacttccagagaatttgtcactggagcctaaagaccaggattcagtcttg
ctagaaaaggacaaa

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_2|553_aa
MVQRLWVSRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIG
PVLGLVCVPLLGSASDHWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPDPRPL
ELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPA
IDWDTSALAPYLGTQEECLFGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSAPSLSPH
CCPCRARLAFRNLGALLPRLHQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGL
YQGVPRAEPGTEARRHYDEGVRMGSLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVA
AFPVAAGATCLSHSVAVVTASAALTGFTFSALQILPYTLASLYHREKQVFLPKYRGDTGG
ASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEA
RVVPGRGICLDLAILDSAFLLSQVAPSLFMGSIVQLSQSVTAYMVSAAGLGLVAIYFATQ
VVFDKSDLAKYSA

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_2|1662_bp
atggtccagaggctgtgggtgagccgcctgctgcggcaccggaaagcccagctcttgctg
gtcaacctgctaacctttggcctggaggtgtgtttggccgcaggcatcacctatgtgccg
cctctgctgctggaagtgggggtagaggagaagttcatgaccatggtgctgggcattggt
ccagtgctgggcctggtctgtgtcccgctcctaggctcagccagtgaccactggcgtgga
cgctatggccgccgccggcccttcatctgggcactgtccttgggcatcctgctgagcctc
tttctcatcccaagggccggctggctagcagggctgctgtgcccggatcccaggcccctg
gagctggcactgctcatcctgggcgtggggctgctggacttctgtggccaggtgtgcttc
actccactggaggccctgctctctgacctcttccgggacccggaccactgtcgccaggcc
tactctgtctatgccttcatgatcagtcttgggggctgcctgggctacctcctgcctgcc
attgactgggacaccagtgccctggccccctacctgggcacccaggaggagtgcctcttt
ggcctgctcaccctcatcttcctcacctgcgtagcagccacactgctggtggctgaggag
gcagcgctgggccccaccgagccagcagaagggctgtcggccccctccttgtcgccccac
tgctgtccatgccgggcccgcttggctttccggaacctgggcgccctgcttccccggctg
caccagctgtgctgccgcatgccccgcaccctgcgccggctcttcgtggctgagctgtgc
agctggatggcactcatgaccttcacgctgttttacacggatttcgtgggcgaggggctg
taccagggcgtgcccagagctgagccgggcaccgaggcccggagacactatgatgaaggc
gttcggatgggcagcctggggctgttcctgcagtgcgccatctccctggtcttctctctg
gtcatggaccggctggtgcagcgattcggcactcgagcagtctatttggccagtgtggca
gctttccctgtggctgccggtgccacatgcctgtcccacagtgtggccgtggtgacagct
tcagccgccctcaccgggttcaccttctcagccctgcagatcctgccctacacactggcc
tccctctaccaccgggagaagcaggtgttcctgcccaaataccgaggggacactggaggt
gctagcagtgaggacagcctgatgaccagcttcctgccaggccctaagcctggagctccc
ttccctaatggacacgtgggtgctggaggcagtggcctgctcccacctccacccgcgctc
tgcggggcctctgcctgtgatgtctccgtacgtgtggtggtgggtgagcccaccgaggcc
agggtggttccgggccggggcatctgcctggacctcgccatcctggatagtgccttcctg
ctgtcccaggtggccccatccctgtttatgggctccattgtccagctcagccagtctgtc
actgcctatatggtgtctgccgcaggcctgggtctggtcgccatttactttgctacacag
gtagtatttgacaagagcgacttggccaaatactcagcgtag

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_3|105_aa
MEMIGKKSPVLPDFSGLDGLCKMVLCLGARGATLKPEVTSCVVKGSFVSNSKALPSCDDS
QGLSWSQDSVVLKVLRKCSLSQQNEFEDKNTAVDECTAVDRQAPI

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_3|318_bp
atggaaatgatagggaagaaaagtcctgttttaccagacttctcaggcctggatggattg
tgcaaaatggtactatgccttggagcaagaggggcaacactcaaacctgaggtcaccagc
tgtgtagtgaagggctcatttgtcagcaactccaaggctctgccatcttgtgatgacagt
caaggcctgtcgtggagccaggactctgttgttctgaaagtgctcagaaaatgcagcttg
agtcagcagaatgagtttgaagataaaaatacagctgtggatgaatgtacagctgtggac
agacaggccccaatttag

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_4|232_aa
MQLIKFEKHCLDEDYGRDSGPPTKKIRSSPREAKNKRRSGKNSQEDSEDSEDKDVKTKKD
DSHSAEDSEDEKEDHKNVRQQRQAASKAASKQREMLMEDVGSEEEQEEEDEAPFQEKDSG
SDEDFLMEDDDDSDYGSSKKKNKKMVKKSKPERKEKKMPKPRLKATVTPSPVKGKGKVGR
PTASKASKEKTPSPKEEDEEPESPPEKKTSTSPPPEKSGDEGSEDEAPSGED

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_4|699_bp
atgcagttaattaagtttgaaaaacactgtttagatgaagattatggaagagattcgggc
cctcccactaagaaaattcgatcatctccccgagaagctaaaaataagaggcgatctgga
aagaattcacaggaagatagtgaggactcagaagacaaagatgtgaagaccaagaaggat
gattctcactcagcagaggatagtgaagatgaaaaagaagatcataaaaatgtgcgccaa
caacggcaggcggcatctaaagcagcttctaaacagagagagatgctcatggaagatgtg
ggcagtgaggaagaacaagaagaggaggatgaggcaccattccaggagaaagattccggc
agcgatgaagatttcctaatggaagatgatgacgatagtgactatggcagttcgaaaaag
aaaaacaaaaagatggttaagaagtccaaacctgaaagaaaagaaaagaaaatgcccaaa
cccagactaaaggctacagtgacgccaagtccagtgaaaggcaaagggaaagtgggtcgc
cccacagcttcaaaggcatcaaaggaaaagactccttctcccaaagaagaagatgaggaa
ccggaaagcccgccagaaaagaaaacatctacaagccccccacccgagaaatctggggat
gaagggtctgaagatgaagccccttctggggaggattaa

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_5|208_aa
MKSDGYPNLALLLLKSLGDKRVTKISRDAYAGTPPSATERAQGPHPRASRWGKGQYGCLR
PSSLKAATCSLSKQDRVEKPKTRTPPTPRARRPTPPELQPMGPLLPNPELLASQTPLLFG
SGLLEQTSPPLPRLFKMDESNQPKMRQSRRATKPTRVCALLPNTPAHWRLLPDAPRSLVR
LNHHVFQAPPCSLIGSTFTVGVLLVKML

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_5|627_bp
atgaagtctgatggttacccgaacctagcccttttattactaaagtcactcggggacaag
agggttacaaaaatatcccgagacgcgtacgcgggaacacccccgtccgctacagagagg
gctcagggcccccacccccgcgccagtcgctgggggaaggggcaatacgggtgcctccgc
ccctcctcgctgaaggccgcgacatgttcgctgtcgaaacaggaccgagtcgagaagcca
aagaccaggaccccccccaccccgcgcgctcggcgccccaccccccccgaacttcagccg
atgggaccgctgctgccgaaccccgagctgctggcttctcaaactccgctgctctttggt
tcagggctcctggaacagacgagccccccgctcccccgtctcttcaaaatggatgaatca
aaccagccgaaaatgcgccaaagccgccgtgcaaccaaacccactagggtttgtgcgctc
ctccccaacacgcctgctcattggagacttctgccagatgcgcccagatcattagtccgt
ttgaatcatcacgtcttccaggccccgccctgctctctgataggctccaccttcaccgtg
ggggtcctgttagtcaagatgctctga

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_6|203_aa
MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ
LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC
LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED
IMSLSTQGDYINLQTKSSSWSCC

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_6|612_bp
atgggcagccgcgaccacctgttcaaagtgctggtggtgggggacgccgcagtgggcaag
acgtcgctggtgcagcgatattcccaggacagcttcagcaaacactacaagtccacggtg
ggagtggattttgctctgaaggttctccagtggtctgactacgagatagtgcggcttcag
ctgtgggatattgcagggcaggagcgcttcacctctatgacacgattgtattatcgggat
gcctctgcctgtgttattatgtttgacgttaccaatgccactaccttcagcaacagccag
aggtggaaacaggacctagacagcaagctcacactacccaatggagagccggtgccctgc
ctgctcttggccaacaagtgtgatctgtccccttgggcagtgagccgggaccagattgac
cggttcagtaaagagaacggtttcacaggttggacagaaacatcagtcaaggagaacaaa
aatattaatgaggctatgagagtcctcattgaaaagatgatgagaaattccacagaagat
atcatgtctttgtccacccaaggggactacatcaatctacaaaccaagtcctccagctgg
tcctgctgctag

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_7|586_aa
MGAGTRALQAHGAGSRFPSLLLLRFPGAPPPGHEAKEGGRAEVDPAPSPVPDWLLLLSIR
ESIFDGAGGVPPSLPQITFATGSQPVGPESAGKKRLGAHGPGREPLAGTSEFLGPDGAGV
EVVIESRANAKGVREEDALLENGSQSNESDDVSTDRGPAPPSPLKETSFSIGLQVLFPFL
LAGFGTVAAGMVLDIVQHWEVFQKVTEVFILVPALLGLKGNLEMTLASRLSTAANIGHMD
TPKELWRMITGNMALIQVQATVVGFLASIAAVVFGWIPDGHFSIPHAFLLCASSVATAFI
ASLVLGMIMIGVIIGSRKIGINPDNVATPIAASLGDLITLALLSGISWGLYLELNHWRYI
YPLVCAFFVALLPVWVVLARRSPATREVLYSGWEPVIIAMAISSVGGLILDKTVSDPNFA
GMAVFTPVINGVGGNLVAVQASRISTFLHMNGMPGENSEQAPRRCPSPCTTFFSPDVNSR
SARVLFLLVVPGHLVFLYTISCMQGGHTTLTLIFIIFYMTAALLQVLILLYIADWMVHWM
WGRGLDPDNFSIPYLTALGDLLGTGLLALSFHVLWLIGDRDTDVGD

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_7|1761_bp
atgggcgctgggacccgcgcgctccaggcgcatggagccggctcccggttcccgtcactc
ctcctactgcgtttccccggcgccccgcctcctgggcacgaagcgaaggaagggggccgg
gccgaggttgatcccgccccctccccagtccctgattggctgctgctgttgtccatccga
gaatctatttttgatggagcggggggggtgccacccagtctgccccagatcacgtttgcc
accggcagccaaccagttgggcccgagtccgcgggcaagaagcgattgggggcgcatggc
ccagggagagagcccttggctgggacctcagagttcctggggcctgatggggctggggta
gaggtggtgattgagtctcgggccaacgccaagggggttcgggaggaggacgccctgctg
gagaacgggagccagagcaacgaaagtgacgacgtcagcacagaccgtggccctgcgcca
ccttccccgctcaaggagacctccttttccatcgggctgcaagtactgtttccattcctc
ctggcaggctttgggaccgtggctgctggcatggtgttggacatcgtgcagcactgggaa
gtcttccagaaggtgacagaggtcttcatcctagtgcctgcgctgctggggctcaaaggg
aacctggaaatgaccctggcatcaaggctttccactgcagccaacattggacacatggac
acacccaaggagctctggcggatgatcactgggaacatggccctcatccaggtgcaggcc
acggtggtgggcttcctggcgtccatcgcagccgtcgtctttggctggatccctgatggc
cacttcagtattccgcacgccttcctgctctgtgctagcagcgtggccacagccttcatt
gcctccctggtactgggtatgatcatgattggagtcatcattggctctcgcaagattggg
atcaacccagacaacgtggccacacccattgctgccagcctgggcgacctcatcaccttg
gcgctgctctcaggcatcagctggggactctacctggaactgaatcactggcgatacatc
tacccactggtgtgtgctttctttgtggccctgctgcctgtctgggtggtgctggcccga
cgaagtccagccacaagggaggtgttgtactcgggctgggagcctgttatcattgccatg
gccatcagcagtgtgggaggcctcatcttggacaagactgtctcagaccccaactttgct
gggatggctgtcttcacgcctgtgattaatggtgttgggggcaatctggtggcagtgcag
gccagccgcatctccaccttcctgcacatgaatggaatgcccggagagaactctgagcaa
gctcctcgccgctgtcccagtccttgtaccaccttcttcagccctgatgtgaattctcgc
tcagcccgggtcctcttcctcctcgtggtcccaggacacctggtgttcctctacaccatc
agctgtatgcagggcgggcacaccaccctcacactcatcttcatcatcttctatatgaca
gctgcactgctccaggtgctgattctcctgtacatcgcagactggatggtgcactggatg
tggggccggggcctggacccggacaacttctccatcccatacttgactgctctgggggac
ctgcttggcactgggctcctagcactcagcttccatgttctctggctcataggggaccga
gacacggatgtcggggactag

>gi568815597r:205618283_205829624|GENSCAN_predicted_peptide_8|41_aa
XIHGVNEKISVQAYETQVKFIFELIQNADTDQEPVSHLHKL

>gi568815597r:205618283_205829624|GENSCAN_predicted_CDS_8|126_bp
nncatccatggagtcaacgagaaaatctcagtccaagcctatgagacccaagtgaaattc
atctttgagttgattcagaatgctgacacagaccaggagccagtttctcacctgcacaaa
ctgtga