GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:28:19

Sequence gi568815575f:134373358_134600074 : 226717 bp : 40.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4261   4398  138  0  0   46  115   101 0.980   8.79
 1.02 Intr +   4648   4749  102  0  0   64  119    47 0.956   4.85
 1.03 Intr +  20144  20277  134  1  2   82  -28    69 0.031  -6.78
 1.04 Intr +  20552  20595   44  2  2  103   83    40 0.093   1.97
 1.05 Intr +  30496  30789  294  2  0   39   86   192 0.680  10.16
 1.06 Intr +  40134  40300  167  1  2   27   92   151 0.554   8.16
 1.07 Intr +  40466  40609  144  1  0   89  103    87 0.999   9.86
 1.08 Intr +  41659  41763  105  0  0  108   26    94 0.962   4.69
 1.09 Intr +  43812  43945  134  2  2   88   71    68 0.900   3.62
 1.10 Term +  51844  51973  130  1  1   59   43   223 0.970  11.57
 1.11 PlyA +  53579  53584    6                               1.05

 2.00 Prom +  69365  69404   40                              -4.05
 2.01 Init +  75650  75652    3  1  0  113   81     0 0.336   1.85
 2.02 Intr +  77604  77769  166  2  1  -16   80   124 0.384  -0.19
 2.03 Intr +  79214  79355  142  0  1  125  -16    70 0.261  -1.21
 2.04 Intr +  80428  80542  115  1  1   54  111   136 0.826  12.03
 2.05 Intr +  86403  86482   80  2  2   53   72    21 0.008  -5.57
 2.06 Intr +  86810  86981  172  2  1   39   77   136 0.005   6.62
 2.07 Intr + 100002 100108  107  2  2   85  111    97 0.998   9.79
 2.08 Intr + 101824 102007  184  1  1   71   56   144 0.978   8.37
 2.09 Intr + 113108 113173   66  1  0   61   95    59 0.547   2.08
 2.10 Intr + 116831 116848   18  1  0  130  100     6 0.538   1.89
 2.11 Intr + 120151 120233   83  0  2   59   95    62 0.658   1.52
 2.12 Intr + 125033 125079   47  2  2   62   93    72 0.801   2.23
 2.13 Intr + 125251 125327   77  2  2   62  101    68 0.911   3.82
 2.14 Term + 156863 157033  171  1  0   94   36   148 0.720   7.04
 2.15 PlyA + 158808 158813    6                               1.05

 3.12 PlyA - 160478 160473    6                              -0.45
 3.11 Term - 161701 161583  119  2  2   84   42    97 0.019   2.42
 3.10 Intr - 168833 168672  162  0  0   72   68    59 0.281   1.33
 3.09 Intr - 171484 171357  128  0  2   92   94   112 0.864  11.60
 3.08 Intr - 176308 175855  454  2  1   54   46   204 0.086   4.19
 3.07 Intr - 176725 176518  208  1  1   71  -48   277 0.432  10.13
 3.06 Intr - 182466 182272  195  0  0   39   74    82 0.087   0.59
 3.05 Intr - 189797 189726   72  2  0   93   72    51 0.127   2.68
 3.04 Intr - 193270 192801  470  2  2  106   32   290 0.007  17.09
 3.03 Intr - 211604 211541   64  2  1   84   80    64 0.067   2.57
 3.02 Intr - 215221 215044  178  0  1   77   47    55 0.057  -0.70
 3.01 Intr - 225041 224842  200  2  2   40   82   133 0.257   5.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  86627  86524  104  0  2   56   41   165 0.874   6.06
S.002 Term - 138786 138680  107  1  2   96   42    71 0.818   0.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:134373358_134600074|GENSCAN_predicted_peptide_1|463_aa
MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNE
SLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPS
QGIYMVYCRKHKKTAHNSEAWFTEYFKPTLDTYCSEKKIPFKILLLIDNASGHPRALMEI
YKEMNVVFMHASTAFIPQFLEPVDQGVLWTFKSYYLRNTFHEAVAAIHSDFCDESGQADL
EESFNEHELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHR
SSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGD
FDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIY
KLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQQLNGN

>gi568815575f:134373358_134600074|GENSCAN_predicted_CDS_1|1392_bp
atgtcaagctcagttgaacagaaaaaagggcctacaagacagcgcaaatgtggcttttgt
aagtcaaatagagacaaggaatgtggacagttactaatatctgaaaaccagaaggtggca
gcgcaccataagtgcatgctcttttcatctgctttggtatcatcacactctgataatgaa
agtcttggtggattttctattgaagatgtccaaaaggaaattaaaagaggcacgaagctg
atgtgttctttgtgccattgtcctggagcaacaattggttgtgatgtgaaaacatgtcac
aggacataccactaccactgtgcattgcatgataaagctcaaatacgagagaaaccttca
caaggaatttacatggtctattgccgaaaacacaagaaaactgcacataactccgaagca
tggtttactgaatattttaagcccactcttgacacctactgctcagagaaaaagattcct
ttcaaaatattactgcttattgacaatgcatctggtcacccaagagctctgatggagatc
tacaaggagatgaatgttgtcttcatgcatgctagtacagcattcattccgcagttctta
gagcccgtggatcaaggagtactttggactttcaagtcttattatttaagaaatacattt
catgaggctgtagctgccatacatagtgatttctgtgatgaatctgggcaagctgattta
gaagaaagttttaatgaacatgaactggagccctcatcacctaaaagtaaaaagaaaagt
cgcaaaggaaggccaagaaaaactaattttaaagggctgtcagaagataccaggtccaca
tcctcccatggaacagatgaaatggaaagtagttcctatagagataggtctccacacaga
agcagccctagtgacaccaggcctaaatgtggattttgccatgtaggggaggaagaaaat
gaagcacgaggaaaactgcatatatttaatgccaagaaggcagctgcccattataagtgc
atgttgttttcttctggcacagtccagctcacaacaacatcaagagcagaatttggagac
tttgatattaaaactgtacttcaggagattaaacgaggaaaaagaatgaaatgtacactt
tgcagtcagcctggtgctactattggatgtgaaataaaagcctgtgttaagacttaccat
taccactgtggagtacaagacaaagctaaatacattgaaaatatgtcacgaggaatttac
aaactatactgtaaaaatcatagtggaaatgatgagagagatgaagaagatgaggaacga
gagagtaaaagccgaggaaaagtagaaattgatcagcaacaactaactcagcagcaactt
aatggaaactag

>gi568815575f:134373358_134600074|GENSCAN_predicted_peptide_2|476_aa
MKGQLYKAKKVSTGFGKKAVTQSMMSFANSFVQWWVQKTDHKEFEEKMENEELDRARRYG
LRLFRTLLVGITKGADRGFIQDRGGVFRAKLRSEPMNLYQSPWLWEVRGVFTIVRLAEYV
VYQPAVPMPKPARYRKLPGHQLDSRSQLLQPVKGLGKHWAKSQENGSHSFRRLRRALRRT
SRLSRAAPPLAAPPPPPLLRHRLPPPEQSARAPAGSVMATRSPGVVISDDEPGYDLDLFC
IPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIK
ALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTM
QTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLN
VWKPAGGHPTPLANTLLTPLGLWLCMPSGPCVDALMTRLMSDTVLPGCLFREMLTP

>gi568815575f:134373358_134600074|GENSCAN_predicted_CDS_2|1431_bp
atgaaaggacagttatataaggccaaaaaagtgtccactggatttggcaagaaagcagtc
acgcagtcaatgatgtcttttgccaacagttttgtacaatggtgggtgcagaagacagat
cacaaagagtttgaggagaaaatggaaaatgaggaattggatagagcaaggaggtatggc
cttagactattcagaacgttactggtgggaataacaaagggagctgaccgaggatttata
caggaccgtggaggggtgtttagagccaagttgagatctgagcccatgaatctgtaccag
tctccatggttgtgggaagtgagaggagtattcaccattgtgcgccttgctgaatatgtg
gtgtaccagccagctgtccccatgccaaagcctgcaagatacaggaagctgccaggccac
cagttggactctaggtctcaactgttacaaccagttaagggtttggggaagcactgggcc
aagagtcaggaaaatggaagccacagcttcaggcggctgcgacgagccctcaggcgaacc
tctcggctttcccgcgcggcgccgcctcttgctgcgcctccgcctcctcctctgctccgc
caccggcttcctcctcctgagcagtcagcccgcgcgccggccggctccgttatggcgacc
cgcagccctggcgtcgtgattagtgatgatgaaccaggttatgaccttgatttattttgc
atacctaatcattatgctgaggatttggaaagggtgtttattcctcatggactaattatg
gacaggactgaacgtcttgctcgagatgtgatgaaggagatgggaggccatcacattgta
gccctctgtgtgctcaaggggggctataaattctttgctgacctgctggattacatcaaa
gcactgaatagaaatagtgatagatccattcctatgactgtagattttatcagactgaag
agctattgtaatgaccagtcaacaggggacataaaagtaattggtggagatgatctctca
actttaactggaaagaatgtcttgattgtggaagatataattgacactggcaaaacaatg
cagactttgctttccttggtcaggcagtataatccaaagatggtcaaggtcgcaagcttg
ctggtgaaaaggaccccacgaagtgttggatataagccagactttgttggatttgaaatt
ccagacaagtttgttgtaggatatgcccttgactataatgaatacttcagggatttgaat
gtttggaaacctgcaggaggccaccccacacccctggcaaacaccctccttactccactt
gggctctggctttgcatgccgagcggcccctgtgtagatgccctcatgacccggctcatg
tctgacaccgtcttgccaggctgcctcttcagggagatgctgactccctag

>gi568815575f:134373358_134600074|GENSCAN_predicted_peptide_3|749_aa
FLKHPVQFWAHTEDLLVKEQYRLKESVTSSAADELSSGDTLVYSSASTSHKLHEYDPLIQ
QRQRIKITLTPHPSWACSPAVDAVIYSPAFCNHQTTTGSCGFPTQGGSNSSTHITEKRVL
REAEVAGERRSACVYVSVAEFVGNRKSAGSGQSPMTVLCSIDWFMVTVHPFMLNNDVCVH
FHELHLGLGCPPNHVQPHAYQFTYRVTECGIRAKAVSQDMVIYSTEIHYSSKGTPSKFVI
PVSCAAPQKSPWLTKPCSMRVASKSRATAQKDEKCYEVFSLSQSSQRPNCDCPPCVFSEE
EHTQMRKLRLREVEIVPLGNDITGTQTQRMCSKCQSQMDVCEANMLDMSSTTLGQHQEHQ
MVPKPTLEDVSHHLYRQHSTLFSLLPVPFFPSQVLPVSTEQKASLSHLAPSRQLKGHRQR
TRERGVVSVPGASGCALRYLVPLALPFAILRFFSPSPRYSSRWRLREPLRRLRRSPPRER
SVLAPRSAPLRLRHAALRASAAASAPSTLRPRLSALRPCSSVPSTSRPATSPSPKSRAPL
LSLSVAVRVSLARSVSPPPQPFLPPCLPRWLARSLALGRGETASQANPRNLCKKLAMKFK
KFFDFGAIFEWSQSFPLSPRPVRFPLEPEGSPVPASLPERPSPRHPASSSGRLQDPGLIL
CSLCHYLFIRTDYAVVTRAGNGGECVWLQKFPVKLASLMMSFGLYIGHFLGVPPANPQEA
PRTRSFFTPKSVMEPSAVPGTAERVLHPG

>gi568815575f:134373358_134600074|GENSCAN_predicted_CDS_3|2250_bp
tttcttaaacacccagtgcagttctgggcacatactgaagatctgttagttaaagagcag
tacagactcaaggaatctgtcaccagttcagcagctgacgagctcagctcaggggacact
ttagtctatagttctgcttcaacatctcacaagctacacgagtatgatccactcattcaa
caaagacaacgtattaaaatcaccctcaccccacatccatcctgggcctgctccccagct
gtagatgcggtcatttattcaccagcattttgcaatcaccaaacaaccacaggttcctgt
gggttccctacacaaggagggtctaactccagcacacacataacagaaaagagggttcta
cgggaggcagaggttgcaggagaaagacgttctgcctgtgtttatgtgtcagttgcagaa
tttgtgggtaacaggaaatcagccggttcaggacaaagtccaatgactgtgctgtgctcc
atagactggttcatggtcacagtgcaccccttcatgctaaacaacgatgtgtgtgtacac
tttcatgaactacacttgggcctgggttgccccccaaaccatgttcagccacacgcctac
cagttcacctaccgtgttactgaatgtggcatcagggccaaagctgtctctcaggacatg
gttatctacagcactgagatacactactcttctaagggcacgccatctaagtttgtgatc
ccagtgtcatgtgctgccccccaaaagtccccatggctcaccaagccctgctccatgaga
gtagccagcaagagcagggccacagcccagaaggatgagaaatgctacgaggtgttcagc
ttgtcacagtccagtcaaaggcccaactgcgattgtccaccttgtgtcttcagtgaagaa
gagcatacccagatgaggaaactgaggctcagagaagtggagattgtaccattaggaaat
gacatcactggaactcaaacccagaggatgtgttccaagtgtcagtcccagatggatgtt
tgtgaagccaacatgttagatatgagctcaacaacccttggtcagcaccaagaacaccaa
atggtgcctaagccaactcttgaggatgttagccatcatctttaccgccagcacagcacc
ttgttctcacttcttccggttccttttttcccttctcaggtactccctgtaagcaccgag
caaaaagcttcgctcagccaccttgcgccgtcccggcagctcaaaggacaccgccagagg
acccgtgagcgtggggtggtgtccgtcccaggagcctctgggtgcgcgctgcgctacctc
gtgcccttggctttgccgtttgccatcctccgttttttctccccgagccctcgctattcg
tctcggtggcggctccgggagcctctccgccggctgcgccgctcgcctccaagggagcgt
tccgtgctggcccctcgctcggctccgctccgcctccgccacgccgctctccgagcttcg
gcagcagccagcgccccctccacgctgcgaccccggctctcggctctccgtccctgtagc
tccgtgcccagcacctcgcgccccgcaacctcgccgtctcccaagtcccgggccccgctt
ctgtcgctgtccgtcgctgtccgtgtgtcgctcgctcggtctgtctctccgcctccccag
cccttccttcctccctgtctccctcgctggcttgcacgttcgctcgctctcggacgcggc
gaaacagcttcgcaggcaaatcccagaaacctttgcaaaaagcttgcaatgaaatttaag
aagttcttcgatttcggcgccattttcgagtggagccagagcttccccctttctccccgt
cctgtacggttccccctggagccagaaggaagcccggtgccagccagccttcctgaaaga
ccaagcccgcgccatccggcttcctccagtggacgcctgcaggacccaggcctcatactg
tgttccttatgtcattacctgttcatcagaaccgactatgcagtagtgaccagagcagga
aatggaggtgaatgtgtttggttacaaaaattcccggtgaaactggctagtcttatgatg
agctttggcctatacattggacacttcctgggtgtgcctcctgcaaatccgcaggaagca
ccaagaaccaggtccttcttcacccccaaatctgtcatggagcccagcgctgttcccggc
acagcagagcgggtgctccatccaggttga