GENSCAN 1.0	Date run: 19-Feb-121	Time: 20:42:16

Sequence gi568815593f:17175217_17375897 : 200681 bp : 42.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    135    130    6                               1.05
 1.02 Term -   2557   2371  187  0  1   64   54   106 0.519   0.78
 1.01 Init -   4654   4506  149  1  2   29   72   162 0.805   8.31
 1.00 Prom -  11752  11713   40                              -3.65

 2.00 Prom +  15842  15881   40                              -6.15
 2.01 Init +  20515  20568   54  0  0   86   59    27 0.099   0.94
 2.02 Intr +  27759  27896  138  2  0   45   36   102 0.128   0.44
 2.03 Intr +  36828  36966  139  2  1   95   96    23 0.310   2.92
 2.04 Intr +  41042  41217  176  0  2   30  115   140 0.462   9.64
 2.05 Intr +  41473  41681  209  0  2   98   59    96 0.745   4.65
 2.06 Intr +  42357  42594  238  0  1  -58  107   290 0.506  12.99
 2.07 Intr +  42677  42753   77  1  2  101   37    70 0.459   0.59
 2.08 Intr +  43552  43818  267  1  0  117   -4   248 0.796  14.22
 2.09 Intr +  44447  44657  211  2  1   35   24   181 0.037   4.39
 2.10 Term +  66559  66786  228  0  0   93   49   204 0.939  12.65
 2.11 PlyA +  70335  70340    6                               1.05

 3.00 Prom +  72154  72193   40                              -6.35
 3.01 Init +  72520  72553   34  0  1   73   35    49 0.785  -1.58
 3.02 Intr +  73958  74032   75  0  0  107   82    68 0.340   6.67
 3.03 Intr +  76277  76346   70  0  1  102   75    43 0.274   1.72
 3.04 Intr +  94277  94385  109  2  1  100   75    33 0.136   2.57
 3.05 Term +  99992 100684  693  1  0   88   48   746 0.460  63.18
 3.06 PlyA + 101594 101599    6                               1.05

 4.03 PlyA - 102166 102161    6                               1.05
 4.02 Term - 104054 103720  335  0  2   47   41   239 0.685   8.89
 4.01 Init - 112628 112460  169  2  1   72   75    76 0.228   4.45
 4.00 Prom - 113262 113223   40                              -7.85

 5.00 Prom + 113390 113429   40                              -8.65
 5.01 Init + 114624 114684   61  2  1   82   19    85 0.485   2.49
 5.02 Intr + 117217 117446  230  2  2   88   77   205 0.706  16.07
 5.03 Intr + 125324 125410   87  1  0  108   91    95 0.705  11.05
 5.04 Term + 131164 131607  444  0  0   72   54   147 0.149   3.95
 5.05 PlyA + 131824 131829    6                               1.05

 6.02 PlyA - 132122 132117    6                               1.05
 6.01 Sngl - 136672 136439  234  1  0   97   36   248 0.976  13.44
 6.00 Prom - 150043 150004   40                              -6.05

 7.04 PlyA - 150882 150877    6                               1.05
 7.03 Term - 153376 153244  133  0  1   89   52   130 0.794   6.08
 7.02 Intr - 159754 159668   87  0  0   49   99    48 0.063   0.17
 7.01 Init - 167491 167364  128  1  2   81   76    64 0.321   4.18
 7.00 Prom - 178455 178416   40                              -3.65

 8.02 PlyA - 178484 178479    6                              -0.45
 8.01 Sngl - 179418 178657  762  0  0   78   46   798 0.999  70.46
 8.00 Prom - 183521 183482   40                              -5.75

 9.06 PlyA - 183794 183789    6                               1.05
 9.05 Term - 184883 184627  257  0  2   20   36   311 0.979  13.86
 9.04 Intr - 190351 190177  175  1  1    8   33    89 0.036  -6.01
 9.03 Intr - 190857 190744  114  0  0   80   77   158 0.680  13.62
 9.02 Intr - 192922 192805  118  0  1   44   82    47 0.597  -0.75
 9.01 Intr - 194173 194080   94  2  1   77   55   115 0.497   5.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_1|111_aa
MVSEQNQGCVHKEGGGVAAGLVINNEGDTGGKTSIDAGEIRTVGVSVAIGIINMQETTPS
VDEKASLLVRGQQMFSIKDKIVNISGFAGCTAFIATTPLCLCSLKAAIDHT

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_1|336_bp
atggtgtctgaacaaaatcagggctgtgttcacaaggaaggaggaggagtggctgctggg
ttggtaatcaacaatgaaggagacacaggagggaagaccagcatagacgctggtgagatc
agaactgtgggtgtgagtgtggccattggcatcatcaacatgcaggagaccacaccatca
gttgatgagaaagccagtctcctagtcagaggtcagcaaatgttttccataaaggacaag
atagtaaacatttctggctttgcaggctgtacagccttcattgcaacaactccactctgc
ctttgcagtttgaaagcagctatagaccatacatga

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_2|578_aa
MALRPIISYPFKAHFTPRDCEAVGIGGLRLWRRGSPFAYGIKKAADTGTDHHWKEAVFAT
CGQQEQVGTAWKKPSLLRRLSPFYHWFVTGKGPNPDPKGGFLDLMQERIQGEHESDPNTA
RGRQNAANKSSKGVNWLLREGKIGFCVIKELPLSTMSRYVIFVCPSCQQFREHPPRGDVS
RPTSWTSATAPPPKLQPSGLSPAGAGAGAEPPKVRNSFAAAQPRRACSWGSPQPRCQPRK
GRGSEREKCRGCSGGGGGSSGSGDDGGGSAPTGSSLRAPPSSRERASASGQAPARRRQRP
RPLGGTALTQGLHRHPEPPPGSPFMQRAAGMWARIGRQGPGVPLKIKIAESWIRSHAQCA
AANRILFMNIHRTLGQAPYLRPQRHFRLETNSVDSPCPCNSHSAEISTAHMGAFFRTLYR
LTTPLSPPRPLALDTTWGKLRHLGVYSNKMAYKNRREENDYLVGILTLSVFSGLRTHCFI
KDSKRRMASRWKSDGGRKKAVVGESDLWGQFTGTKQKLQPRAAGFKDKAAKQVRGAGTQT
QGFLKHKLQHLIKWGKEGTLNRDTELHCVSTKCECPTF

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_2|1737_bp
atggcgctaagacctatcatcagctaccctttcaaggcacattttacacctagggactgt
gaagcagtgggaattggagggctcaggctatggagaaggggaagtccttttgcatatggt
attaagaaggcggcggacactgggactgatcatcactggaaagaagctgtttttgccaca
tgtggacagcaagaacaggtaggcactgcatggaaaaagccctcgctgcttaggaggcta
tcacctttttaccattggtttgttacaggaaagggtcccaatccagaccccaagggagga
ttcttggatctcatgcaagaaagaattcagggcgagcatgaaagcgatccaaacacagcc
agagggcgccaaaatgccgcaaataaaagttccaaaggcgtcaactggcttttgcgggaa
ggtaaaattggcttttgtgtaatcaaagagctaccgttgtcaacgatgtcacgttacgtt
atttttgtatgtccctcttgccaacagttccgagagcatcctccgaggggcgacgtctct
cgccccaccagctggacctcggcgaccgcgcctcccccgaagctgcagccttcggggctg
agccccgcgggtgcgggtgcaggtgcggagccgcccaaggtgcgcaactcgtttgcagcg
gcgcagcccagacgcgcctgcagctggggctcaccccaacctcgctgccagccgaggaag
gggagggggagcgagcgcgagaaatgcagaggctgcagcggcggcggcggcggcagtagc
ggcagcggcgacgacggcggcggcagcgctccaactggctcctcgctccgggctccgccg
tcgagccgggagagagcctccgccagcggccaggcaccagccagacgacgccagcgaccc
cggcctctcggcggcaccgcgctaactcaggggctgcataggcacccagagccgcccccg
ggctctcccttcatgcagcgggcagcagggatgtgggcccggattggacggcaagggcct
ggggtccctctaaaaataaaaattgcggaatcctggatccgatcgcacgcacaatgcgcg
gctgcaaaccgcattcttttcatgaatattcatcgaacgcttggccaggctccttatctg
cgtccccagagacatttccgccttgaaacgaactcggtggacagcccttgcccatgtaat
tctcactctgctgaaattagcacagcacacatgggtgcattttttaggaccttgtacagg
ttgacaacacctctgtctcccccgcggccactcgcacttgacaccacctggggaaaatta
agacatcttggcgtttattcgaacaagatggcctacaaaaaccggagagaagaaaacgat
taccttgtcgggatcctaaccctttctgttttctctggactccgaactcattgtttcatt
aaggattccaaaaggcgaatggcgtccagatggaaatctgatgggggcagaaagaaggca
gtcgttggggagtcagacctgtggggacagttcacaggaacaaaacagaagctccaacca
agagctgcaggatttaaggacaaggctgcaaaacaagtacgtggagctggcacgcaaact
cagggctttctgaaacacaaacttcagcatttaattaaatgggggaaggaaggaactctc
aaccgagatactgaactgcactgtgtctctacaaaatgcgagtgtcccacattttaa

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_3|326_aa
MKCVRVRVLALQPNAGTVPVVGLALMVGLSCVGCSKLLVSVEGSKQRLELQLSLSSSRRS
PGCSDQLTVLEWHTLFSLHRKAELYHISSRIAVSSQNSKMGGKLSKKKKGYNVNDEKAKE
KDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEE
APKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEP
SKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPKAQG
PAASAEEPKPVEAPAANSDQTVTVKE

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_3|981_bp
atgaagtgtgttcgtgtccgtgtgctggcgcttcagcccaacgcaggaaccgtccctgtt
gttggccttgcattgatggtgggcctgtcctgtgtggggtgcagtaaattgttggtttct
gtggaagggtccaaacagcggctggagctccaactgtctttgtctagcagcaggaggagc
ccaggttgctctgatcaactcacagtgctcgaatggcacactctcttctctcttcaccga
aaagcagaactttatcacatttcttccagaatagctgtttctagccagaactccaagatg
ggaggcaagctcagcaagaagaagaagggctacaatgtgaacgacgagaaagccaaggag
aaagacaagaaggccgagggcgcggcgacggaagaggaggggaccccgaaggagagtgag
ccccaggcggccgcagagcccgccgaggccaaggagggcaaggagaagcccgaccaggac
gccgagggcaaggccgaggagaaggagggcgagaaggacgcggcggctgccaaggaggag
gccccgaaggcggagcccgagaagacggagggcgcggcagaggccaaggctgagcccccg
aaggcgcccgagcaggagcaggcggcccccggccccgctgcgggcggcgaggcccccaaa
gctgctgaggccgccgcggccccggccgagagcgcggcccctgccgccggggaggagccc
agcaaggaggaaggggaacccaaaaagactgaggcgcccgcagctcctgccgcccaggag
accaaaagtgacggggccccagcttcagactcaaaacccggcagctcggaggctgccccc
tcttccaaggagacccccgcagccacggaagcgcctagttccacacccaaggcccagggc
cccgcagcctctgcagaagagcccaagccggtggaggccccggcagctaattccgaccaa
accgtaaccgtgaaagagtga

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_4|167_aa
MEILQGGPASWVCHLDSHKGPHTQSPVLDRMLCSLEILKSLSKAQPFLQSVLPVGPNLRL
DSREKEDSPRLGNDIPGVPVPPLPPYCQEQTEDGLLSGLRPGRAILGCMAHASSWGPESI
PIMQRRHQLRKRIFKVEGQAWHPCTSSSGFLIVSSLQYAQRHPVNER

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_4|504_bp
atggagatcttgcagggaggaccagcttcatgggtgtgccacctggacagtcacaaagga
ccccacactcagagtcctgtgctggatcgaatgctttgctctcttgaaattcttaagagt
ttaagcaaggcccagccctttttgcagtcagtcctgcctgtaggacctaacctacgtctt
gattccagagagaaagaagattctccaagactggggaatgacattccgggagtgccagta
ccacctctgcctccatattgccaggaacagactgaagatggccttctctcagggttgaga
ccaggaagggccatcctgggatgcatggcacatgccagctcttggggaccagagtccatt
cccatcatgcagaggcggcatcagctacggaaaagaatcttcaaagtggagggacaagcc
tggcatccctgtacaagttcctctggattcctcatagtttcctccttgcagtacgcacaa
aggcacccagtaaatgaacgttag

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_5|273_aa
MKIRFPQSRGGWRALGLMAKDNDSVLFLEMVSGLREELEESLVWCLRTQEDQGSGAIVSR
HDRCLKTSRARKEHTPGEPATQMQKLVTHVSTPSADKVSFIASSDSPSHSLTRGGGVETS
GACRSQAILLVRLTSQLFRAVSWAGCSLPWPVSGVLSKHACRPHYSTQPTGPGRAASLPS
KGAQLELEEMLVPRKMSISPLESWLTACCLLPRLDAQTPGTAAPAQFYECLPSQMGEGAK
QEDEKAWDTTQMQSKNVLKTRRQKMNHHKHRKL

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_5|822_bp
atgaagattcgatttccgcagtcccgtgggggatggcgagccctgggcctaatggctaaa
gataacgactccgtgttgttccttgagatggtttcgggtttacgggaagagttagaagag
agtcttgtgtggtgtttgaggactcaggaagatcagggttctggggcgatagtttctaga
cacgatagatgcctgaaaaccagcagggcccgaaaggagcatacccctggggaaccagca
actcaaatgcagaaactggtaacccacgtgagcaccccatcagcagacaaggtctccttc
atcgctagctctgattcgccctcacactccctcactaggggtgggggtgtggagacttca
ggtgcctgccggagccaggccatactcctggtgcgcctgacttctcagctgttcagggct
gtttcctgggcaggctgcagtctgccctggcctgtttctggagtgctgagcaagcatgcc
tgcaggccccattacagcacacagccaactggcccaggtagggctgcctcactccccagc
aagggggcccagctggagctcgaggagatgctggtccccaggaagatgtccatcagcccc
ctggagagctggcttacagcctgctgcctcctgcccagactggatgcccagaccccaggg
actgcggctccagcccaattctatgagtgtctccctagccagatgggggaaggggccaag
caggaggatgagaaggcctgggatacaactcagatgcagagcaaaaacgtgctgaagacc
cgccggcagaagatgaaccaccacaagcaccggaagctgtga

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_6|77_aa
MPEPSPASVGSCAARASPTSATPCSTAPSPIDHPRAEECERMARDWQAAPPAAPVQDPLG
EASWAPEFGGALENLYV

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_6|234_bp
atgcctgagccttcccccgcctccgtgggctcctgtgcagcccgagcctccccgacgagc
gccaccccctgctccacggcgcccagtcccatcgaccacccaagggctgaggagtgtgag
cgcatggcgcgggactggcaggcagctccacctgcagccccggtgcaggatccactgggt
gaagccagctgggctcctgagtttggcggggctttggagaacctttatgtctag

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_7|115_aa
MMILLKRWDFGELIIGYKGVAVMNAISALIQETPESCLTSSIGSMSMSHGLKMDSAKNEQ
SIKAGFTLHDTSKTYLGGSQIVVLNQQQQHHLGLSNAKSQPLTQDRLTQKLRGWG

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_7|348_bp
atgatgatacttcttaagaggtgggactttggggagctgattataggttataagggtgta
gcagtcatgaatgcgattagtgccctgatacaagaaaccccagagagctgcctcacctct
tccatcgggtcaatgagtatgtctcatgggcttaaaatggacagtgcaaagaatgagcag
tctataaaagcaggttttacactgcatgataccagcaaaacctacctcggtggttctcaa
atagtggtcctcaaccagcagcagcagcatcacctgggcctgagcaatgcaaagtctcaa
cctctcacccaagaccgactgactcagaaactcaggggttggggctga

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_8|253_aa
MDVLPRESSGFPASTVLGQNLALVPHTGRLPIASPPSPPHRALGLPQGPRRRSSTAQSPP
RTQPPLLSRRHDDRVHLTGAPGLPPGLKAAINRQINLELYASCVYLSMSYYFDRDDVALK
NFAKYFLHQSHEEREHAEKLMKLQNQGGGRIFLQDIKKPDCDDWESGLNAMECALHLEKN
VNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHMTNLCKMGAPESSLAEYL
FDQHTLGDSDNES

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_8|762_bp
atggacgttcttccacgagagtcgtcggggtttcctgcttcaacagtgcttggacagaac
ctggcgctcgtcccccacaccggccggctgcccatagccagccctccgtcacctcctcac
cgcgccctcggactgccccaaggcccccgccgccgctccagcactgcgcagtcaccaccg
cgaacgcagccgcctctccttagtcgccgccatgacgaccgcgtccacctcacaggtgcg
ccaggactaccaccaggactaaaggccgccatcaaccgccagatcaacctggagctctac
gcctcctgcgtttacctgtccatgtcttactactttgaccgcgatgatgtggctttgaag
aactttgccaaatactttcttcaccaatctcatgaggagagggaacatgctgagaaactg
atgaagctgcagaaccaaggaggtggccgaatcttccttcaggatatcaagaaaccggac
tgtgatgactgggagagcgggctgaatgcgatggagtgtgcattacatttggaaaaaaat
gtgaatcagtcactactggaactgcacaaactggccactgacaaaaatgacccccatttg
tgtgacttcattgagacacattacctgaatgagcaggtcaaagccatcaaagaattgggt
gaccacatgaccaacttgtgcaagatgggagcacccgaatctagcttggcggaatatctc
tttgaccagcacaccctgggagacagtgataatgaaagctaa

>gi568815593f:17175217_17375897|GENSCAN_predicted_peptide_9|252_aa
XHLAFPHINLVLTPHSGDHQLRGKKRERRTMGTSLPQQAVHLWIPLPDANFAHVMSIKIK
KMEPITEISTWLGILALFSTCRSELSLRSQLRDAFLDHPIMDREPPAQQSSSKYKQLLEI
QTGGPAPNKVAGKLSCSVKSSQRCSHENNSFCKAIGLLPPWALIALPESSSNLAWEKEEK
SADQKNNWPEKSDVRKQHAGGAAPAEALENKGRFKITGLDNEERDYDLQKSSVSRKERLR
FARCKLPRNHPL

>gi568815593f:17175217_17375897|GENSCAN_predicted_CDS_9|759_bp
ngccacctggctttcccacacatcaacctcgtgctcacaccccactctggagaccaccag
cttcgaggcaaaaagagagaacgacgtacaatggggacttcgcttccccagcaggcagtt
cacctctggatacccctccctgatgcaaactttgctcatgtcatgtctatcaagatcaag
aaaatggagcccataactgagatcagcacatggcttggcatcctcgccctcttctccaca
tgccggtctgagctgtcactcagaagtcagctcagagatgcctttctggaccatccaatc
atggacagagagccaccagcacagcagagcagcagcaaatataaacaacttctagaaatc
caaacaggagggccagcaccaaacaaggttgctggcaagctttcttgctcagtaaagtcc
tctcaacgctgttcccatgaaaacaattcattctgcaaagcaatcggcctcctgcctcct
tgggcactaattgctctgcctgaaagttcgagcaacctagcctgggagaaagaggagaaa
tccgcagaccagaagaacaactggccagagaaaagtgatgtcagaaagcagcatgctgga
ggagcagctccagcagaagccctggagaacaaggggagattcaaaatcactggacttgac
aatgaggagagagattatgaccttcaaaaaagcagcgtcagcagaaaggagcggttacgc
tttgctcgatgcaagttacccagaaatcatcccctctaa