GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:38:07

Sequence gi568815587f:114196557_114412474 : 215918 bp : 43.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2531   2902  372  1  0   90   -3   263 0.035  14.30
 1.02 Intr +   8309   8348   40  1  1   83   91    19 0.037  -0.50
 1.03 Intr +  21566  21659   94  0  1   76   66    68 0.018   2.42
 1.04 Intr +  25850  25958  109  2  1   85   59    64 0.029   3.49
 1.05 Intr +  41641  41727   87  0  0   93   71    49 0.087   3.87
 1.06 Intr +  43524  43581   58  2  1   70   85    -4 0.038  -4.04
 1.07 Intr +  45611  45781  171  0  0  127   96   197 0.935  24.31
 1.08 Intr +  50642  50809  168  0  0  107   86   356 0.988  37.22
 1.09 Term +  53770  53999  230  2  2  133   49   412 0.985  38.59
 1.10 PlyA +  54078  54083    6                               1.05

 2.04 PlyA -  56076  56071    6                               1.05
 2.03 Term -  66330  66262   69  0  0  121   44    44 0.458   1.24
 2.02 Intr -  75152  74997  156  2  0   82   48    84 0.016   4.01
 2.01 Init -  84424  84173  252  1  0   64   51   157 0.076   4.94
 2.00 Prom -  92698  92659   40                              -4.66

 3.00 Prom +  96126  96165   40                              -6.66
 3.01 Init + 100001 100154  154  1  1   66   97    35 0.869   2.35
 3.02 Term + 101395 101606  212  2  2   67   44   283 0.487  19.26
 3.03 PlyA + 102515 102520    6                               1.05

 4.00 Prom + 106293 106332   40                              -6.06
 4.01 Sngl + 115445 115921  477  1  0   57   44   430 0.317  31.60
 4.02 PlyA + 116931 116936    6                               1.05

 5.08 PlyA - 117606 117601    6                               1.05
 5.07 Term - 120980 120876  105  2  0  105   42    72 0.641   2.71
 5.06 Intr - 123949 123876   74  2  2   57   92    24 0.122  -1.17
 5.05 Intr - 144583 144476  108  2  0   49   48   125 0.094   4.86
 5.04 Intr - 149196 149139   58  0  1  103  103    -4 0.093   1.06
 5.03 Intr - 169637 169444  194  0  2  120   66    49 0.066   5.11
 5.02 Intr - 175025 174948   78  0  0   45   72    90 0.127   2.62
 5.01 Init - 181010 180998   13  2  1   71  119     0 0.100   0.80
 5.00 Prom - 191635 191596   40                              -4.16

 6.00 Prom + 202094 202133   40                              -4.56
 6.01 Init + 204116 204211   96  1  0   83  115    96 0.978  12.33
 6.02 Intr + 205142 205304  163  1  1   88   93    50 0.905   5.05
 6.03 Term + 211079 211251  173  0  2   37   41    95 0.228  -2.31
 6.04 PlyA + 213831 213836    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:114196557_114412474|GENSCAN_predicted_peptide_1|442_aa
MDAGSWDRDFGHVCWDLGPGCQTRMLGPGTGMPDMDAGPRDGDDGHGCRWAQGRGCRTWM
PLGPGTGMPDMDAAGPRDGDAGHGCRWAPGRGCWTWMPLGPGTGMLDMDAGPRDGDASHG
CRWAACKWSLALSWIWAGGLDGQSSRLLLEISQRRTCCAARTFLEVQPRGSLREGESGSV
GVSKVILGRNLNGYDKDEGSFVRELWPISPLAASNRLLLLLVPMCAQSHWLQTQEQNPVL
AVFLLPCSAFLTAGTDMAVFCLLCGKRFQAQSALQQHMEVHAGVRSYICSECNRTFPSHT
ALKRHLRSHTGDHPYECEFCGSCFRDESTLKSHKRIHTGEKPYECNGCGKKFSLKHQLET
HYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQKHMKG
HKPEEIPPDWRIEKTYLYLCYV

>gi568815587f:114196557_114412474|GENSCAN_predicted_CDS_1|1329_bp
atggatgctgggtcctgggatagggattttggacatgtatgctgggacctgggaccggga
tgccagacacggatgctgggccccgggacggggatgccggacatggatgccgggccccgg
gacggggatgacggacatggatgccgctgggcccagggacggggatgccggacatggatg
ccgctgggcccagggacggggatgccggacatggatgccgctgggccccgggatggggat
gccggacatggatgccgctgggccccgggacggggctgctggacatggatgccgctgggc
cccgggacggggatgctggacatggatgctgggccccgggatggggatgccagccatgga
tgccgctgggcagcttgcaagtggtcactcgccctgagctggatttgggcagggggattg
gatgggcagtcctccaggctgctgttggaaatttctcagagaaggacctgctgtgctgca
cggaccttcctggaagtccaacccaggggctctttgagagagggggaatcaggaagtgta
ggagtgagcaaagtgattctgggcagaaacctgaatggatatgacaaggacgagggatcc
tttgtccgggagctgtggcccatcagccctctcgctgcttctaaccgcttgctgctgctg
ttggtccccatgtgtgcccagagtcactggcttcaaacacaggagcaaaatcctgtgctg
gctgtttttctccttccctgctcagccttcctgactgctggcactgacatggccgtcttc
tgtctgctgtgtgggaagcgcttccaggcgcagagcgcactgcagcagcacatggaggtc
cacgcgggcgtgcgcagctacatctgcagtgagtgcaaccgcaccttccccagccacacg
gctctcaaacgccacctgcgctcacatacaggcgaccacccctacgagtgtgagttctgt
ggcagctgcttccgggatgagagcacactcaagagccacaaacgcatccacacgggtgag
aaaccctacgagtgcaatggctgtggcaagaagttcagcctcaagcatcagctggagacg
cactatagggtgcacacaggtgagaagccctttgagtgtaagctctgccaccagcgctcc
cgggactactcggccatgatcaagcacctgagaacgcacaacggcgcctcgccctaccag
tgcaccatctgcacagagtactgccccagcctctcctccatgcagaagcacatgaagggc
cacaagcccgaggagatcccgcccgactggaggatagagaagacgtacctctacctgtgc
tatgtgtga

>gi568815587f:114196557_114412474|GENSCAN_predicted_peptide_2|158_aa
MAGWRSGHSALAAAFLFLVPSFSGQDLGEQECRLPANEQAGDKQRREEPSHPTGPAAPKL
KTWLPSCAQRVKDKGNNPKTGLGQTTEWMLVIHKVGNTGRRTGLEEGEEDDMMRNEELHL
EHAWLEAKKLNLTQMQLVSLEAHSMLKTTLVGVEGKTK

>gi568815587f:114196557_114412474|GENSCAN_predicted_CDS_2|477_bp
atggccgggtggaggtcagggcactctgcgctggctgcggccttcctcttcctggttccc
tcattcagtggtcaggatctgggagaacaggagtgcaggctgccggcaaatgagcaggcc
ggggacaagcaaaggagggaagagccctcccaccccactggccctgcagcccccaagctc
aagacttggctgccctcttgtgcccagagagtgaaagacaagggaaataatccaaaaaca
ggtcttggtcagaccactgagtggatgctggtaattcataaagtagggaacacaggaaga
agaacaggtttagaggagggtgaagaggatgacatgatgagaaacgaggagttgcatttg
gagcatgcttggcttgaggctaaaaaattgaatctaacccagatgcagctcgtgtcacta
gaagctcactctatgctgaagaccacactggtcggcgtggaggggaaaacaaagtga

>gi568815587f:114196557_114412474|GENSCAN_predicted_peptide_3|121_aa
MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI
DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPEAFDWSPVVTYVCDLEGN
R

>gi568815587f:114196557_114412474|GENSCAN_predicted_CDS_3|366_bp
atggaatcaggcttcacctccaaggacacctatctaagccattttaaccctcgggattac
ctagaaaaatattacaagtttggttctaggcactctgcagaaagccagattcttaagcac
cttctgaaaaatcttttcaagatattctgcctagacggtgtgaagggagacctgctgatt
gacatcggctctggccccactatctatcagctcctctctgcttgtgaatcctttaaggag
atcgtcgtcactgactactcagaccagaacctgcaggagctggagaagtggctgaagaaa
gagccagaggcctttgactggtccccagtggtgacctatgtgtgtgatcttgaagggaac
aggtag

>gi568815587f:114196557_114412474|GENSCAN_predicted_peptide_4|158_aa
MTGVENNVCGFVFFRVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCL
DAACPDLPTYCRALRNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVK
EAGYTIEWFEVISQSYSSTMANNEGLFSLVARKLSRPL

>gi568815587f:114196557_114412474|GENSCAN_predicted_CDS_4|477_bp
atgactggagtggaaaacaatgtctgtgggtttgtgtttttcagagtcaagggtccagag
aaggaggagaagttgagacaggcggtcaagcaggtgctgaagtgtgatgtgactcagagc
cagccactgggggccgtccccttacccccggctgactgcgtgctcagcacactgtgtctg
gatgccgcctgcccagacctccccacctactgcagggcgctcaggaacctcggcagccta
ctgaagccagggggcttcctggtgatcatggatgcgctcaagagcagctactacatgatt
ggtgagcagaagttctccagcctccccctgggccgggaggcagtagaggctgctgtgaaa
gaggctggctacacaatcgaatggtttgaggtgatctcgcaaagttattcttccaccatg
gccaacaacgaaggacttttctccctggtggcgaggaagctgagcagacccctgtga

>gi568815587f:114196557_114412474|GENSCAN_predicted_peptide_5|209_aa
MTRPGKCENQSRVLSTSPQTEKLEVEGILLGKSHCGEDRKEHNNACHQEEEAPDVNPLHG
LQASGSPGKTQRIKSQALEGTRLYSHSEETRSGLIFLATIILSAPMSLPILDSTCASFLV
SGAGGEKMTTMLNPQFLCHHLLNCCLQLPLGFHNALLKDSDLGNMKLQSVTERSQENKSH
EARDCVIFTVGSSSQAQCLAHNRDARNIF

>gi568815587f:114196557_114412474|GENSCAN_predicted_CDS_5|630_bp
atgaccaggcctggtaagtgtgagaaccagtcgagagtgttaagcaccagtccacagact
gagaaattggaagtagaaggaatactgctgggaaagtcccactgtggggaggataggaaa
gagcataacaatgcctgccaccaggaggaagaggccccagatgtcaacccattgcatggt
ttgcaggcatcgggatcaccgggaaagactcaaagaatcaagtcacaggcactggaggga
acaaggctttactcacatagcgaagagacaagatcaggcttaatattcctggcaaccatc
attctttctgctcctatgagtttgcctattttagattctacatgtgcctctttcttagtt
agtggtgctggtggtgagaagatgaccaccatgctaaacccccagttcctgtgccaccac
ctgctcaactgctgcctgcagctgccactcggatttcataatgctcttctaaaggattca
gacttgggaaacatgaagttacaatcagtaactgagcgaagccaggaaaataagtcccac
gaggccagagactgcgtcatcttcactgtaggatcctcatctcaggcccaatgcctagca
cataacagggatgcaagaaacatcttctga

>gi568815587f:114196557_114412474|GENSCAN_predicted_peptide_6|143_aa
MGAAAAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHE
VSVPYAMNLLNGIKLYGRPIKIQFRSDRHYSREQRYTDHGSDHHYRGKRDDFFYEDRNHD
DWSHDYDNRRDSSRDGKWRSSRH

>gi568815587f:114196557_114412474|GENSCAN_predicted_CDS_6|432_bp
atgggggcggcggcggcggaagcggatcgcactctctttgtgggcaaccttgaaacgaaa
gtgaccgaggagctccttttcgagcttttccaccaggctgggccagtaataaaggtgaaa
attccaaaagataaggatggtaaaccaaagcagtttgcgtttgtgaatttcaaacatgaa
gtgtctgttccttatgcaatgaatctacttaatggaatcaaactttatggaaggcctatc
aaaattcaatttagatcagatagacattatagccgggaacagcgttacactgatcatggg
tctgaccatcattacagaggaaagagagatgatttcttctatgaagacaggaatcatgat
gactggagccatgactatgataacagaagagacagtagtagagatggaaaatggcgctca
tctcgacactaa