GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:38:44

Sequence gi568815593f:163339257_163542562 : 203306 bp : 38.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12162  12202   41  2  2   64   92    50 0.365   2.71
 1.02 Intr +  16804  17029  226  1  1   73   44   116 0.423   2.76
 1.03 Intr +  17550  17675  126  2  0   -2   56   126 0.145   0.36
 1.04 Intr +  20442  20738  297  2  0   88    1   173 0.437   4.75
 1.05 Term +  25750  25977  228  0  0   69   42   239 0.882  13.05
 1.06 PlyA +  26524  26529    6                               1.05

 2.00 Prom +  39729  39768   40                              -5.55
 2.01 Sngl +  41171  41539  369  1  0   71   38   189 0.878   8.06
 2.02 PlyA +  41567  41572    6                              -1.95

 3.00 Prom +  41764  41803   40                              -3.65
 3.01 Init +  46034  46257  224  1  2   34   37   196 0.029   7.18
 3.02 Intr +  61237  61337  101  1  2   36   93    68 0.014   0.93
 3.03 Intr +  73776  73911  136  1  1   94   82    70 0.264   5.71
 3.04 Intr +  97230  97255   26  0  2  125  106     2 0.077   2.45
 3.05 Intr +  98466  98494   29  1  2  107   83    10 0.134  -0.68
 3.06 Intr + 100001 100264  264  1  0   76   95   153 0.953  11.59
 3.07 Intr + 101822 101989  168  1  0   81   93   100 0.933   9.02
 3.08 Intr + 102789 102887   99  2  0   49   95    49 0.619   1.09
 3.09 Term + 105081 105143   63  2  0  102   41    27 0.363  -3.69
 3.10 PlyA + 105186 105191    6                               1.05

 4.00 Prom + 114873 114912   40                              -4.75
 4.01 Sngl + 120642 121079  438  2  0   70   48   405 0.991  28.71
 4.02 PlyA + 121729 121734    6                               1.05

 5.00 Prom + 122142 122181   40                             -12.33
 5.01 Init + 122542 122605   64  0  1   53   79    24 0.416  -0.64
 5.02 Intr + 124600 124698   99  2  0  107   85    57 0.505   6.46
 5.03 Intr + 125467 125546   80  2  2   90  100    56 0.513   5.35
 5.04 Intr + 130385 130573  189  1  0   70   65   130 0.492   7.76
 5.05 Intr + 132107 132207  101  1  2   58   93    59 0.946   1.39
 5.06 Intr + 133923 133997   75  0  0   47   58   120 0.859   2.61
 5.07 Intr + 134123 134301  179  2  2   45   62   167 0.981   8.44
 5.08 Intr + 134801 134949  149  0  2   74   25   135 0.948   4.83
 5.09 Intr + 136202 136416  215  1  2   30    9   257 0.899   8.59
 5.10 Intr + 139428 139544  117  0  0   77   63   112 0.964   6.26
 5.11 Intr + 143386 143532  147  1  0   56   71   207 0.997  14.23
 5.12 Intr + 143764 143916  153  1  0   64   84   142 0.996   9.67
 5.13 Intr + 144012 144111  100  0  1   83   72    86 0.995   5.69
 5.14 Intr + 151134 151296  163  2  1  100  116    95 0.998  12.13
 5.15 Intr + 157673 157888  216  0  0   93   70   107 0.676   6.95
 5.16 Term + 157976 158067   92  0  2   87   39    75 0.730  -0.60
 5.17 PlyA + 158191 158196    6                               1.05

 6.00 Prom + 161449 161488   40                              -4.85
 6.01 Init + 164139 164168   30  2  0   82  110    42 0.750   5.59
 6.02 Intr + 172746 172940  195  2  0   85   80    92 0.929   6.79
 6.03 Intr + 174299 174413  115  1  1   42   95   115 0.972   6.70
 6.04 Intr + 174586 174738  153  2  0   82   82   134 0.998  11.32
 6.05 Intr + 177262 177455  194  2  2  104   99   201 0.999  21.09
 6.06 Intr + 178305 178418  114  2  0   68   95    30 0.725   1.42
 6.07 Term + 178937 179107  171  1  0   80   29   169 0.999   7.04
 6.08 PlyA + 179870 179875    6                               1.05

 7.06 PlyA - 180785 180780    6                               1.05
 7.05 Term - 184492 184402   91  0  1   74   47    85 0.568  -0.79
 7.04 Intr - 188016 187901  116  0  2   21   92    75 0.086  -0.47
 7.03 Intr - 192280 192235   46  0  1  107   81    34 0.416   2.09
 7.02 Intr - 195581 195408  174  1  0   67   86    78 0.856   3.63
 7.01 Init - 196268 196081  188  2  2   91  103    92 0.950   9.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  46034  46261  228  1  0   34   53   197 0.803   5.67
S.002 Sngl +  52617  52955  339  2  0   77   32   190 0.883   8.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_1|305_aa
MGEEKPRVCGEKRRAWDLQPAMPEPPPNLWAPAQPEPPQQVPPPASRHPVPSTTQGLRSV
GAWHGTGRQLHLQPPCRIHWVKPAGLLSLVCSFTPEPARPRTHQKEETLNTSEHQKEQTP
DKPPLRTVTLTTWRPRKDSGLLGWIQSPPCCVQPCNLVPYTLATPAMAKRSQCIAQVIAS
EGASPKPWQLPHGVGPAGVQKSRSEIWEPLPRFQRMYGNTWMSSQKIAAGLSVYPNYSWM
WDKNSGPAECGYKERLEHCSPLPFTGRGQLPHMMGSSTEVEAAAGPVPRATGRSGTMGLK
ELGML

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_1|918_bp
atgggagaagagaaacccagagtgtgtggagagaagaggagggcttgggacctgcagcct
gccatgcctgagcctccccccaacctgtgggctcctgcgcagcccgagcctccccaacaa
gtgccaccccctgcttcacggcacccagtcccatcgaccacccaagggctgaggagtgtg
ggcgcatggcatgggactggcaggcagctccacctgcagcccccatgcaggatccactgg
gtgaagccagctgggctcctgagtctggtctgcagcttcactcctgagccagcgagacca
cgaacccaccagaaggaagaaactctgaacacatccgaacatcagaaggaacaaactccg
gacaagccgcctttaagaactgtaacactcaccacctggaggcctaggaaggatagtggt
ctcctgggctggattcagagccctccttgctgtgtgcagccttgcaacttggtgccctac
accctagccactccagccatggctaaaaggagccaatgtatagctcaggtcattgcttca
gagggtgcaagccccaagccttggcagcttccacatggtgttgggcctgcaggtgtgcag
aagtcaagaagtgagatttgggaacctctgcctagatttcagaggatgtatggaaacacc
tggatgtccagtcaaaagattgctgcagggttgtcagtgtaccctaattattcttggatg
tgggacaagaactcgggacctgctgaatgtgggtacaaagaaagactggaacactgtagc
cctctgcccttcactggcagagggcagctgccccacatgatgggaagcagcactgaggtg
gaagcagcagcagggccagtccccagagccacaggccggagtgggacaatgggactaaaa
gagcttggcatgctgtaa

>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_2|122_aa
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRINRQPTEWEKILAIYSSDKGL
ISRIYNELKQIYKKKTNNPINKWVKDMNRHFSKEDIYAPKRHMKKCSSSLAIREIRIKTT
MR

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_2|369_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaaccaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagaata
aacaggcaacctacagaatgggagaaaattttggcaatctactcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aacaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcacccaaa
agacacatgaaaaaatgctcatcatcactggccatcagagaaatacgaatcaaaaccaca
atgagataa

>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_3|369_aa
MTDVLIKSGNFETARHRERILHENSGREQCDDSTSQGTANIANKPPEARRESPSQVSEGI
NSAKNVIVDFQPPELYVDTSFSSRINLNQQLGSTQNLHFSDDVFEAQKGPLEVGGSTAAM
TLGRKAPCQADLGFRLLELSTPLAVSSAALPFSRVLFCGIALGLSDLISWGEMIEVLTTT
DSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGF
DTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATDLIRISQYR
FTVSDLMRMEKIVLEKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKKTGDICIYDKN
FYTEPTASN

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_3|1110_bp
atgactgatgttcttataaaaagtggaaattttgagacagcaagacacagagagcgaata
ctacatgaaaattcaggcagagagcaatgtgatgattctacaagtcaaggaacagcaaac
attgccaacaaaccaccagaagccaggcgagagtctccctctcaagtctcagagggaatc
aactctgccaaaaatgtgatcgtggatttccaacctccggaactttatgtggacacatca
ttcagttcccgaatcaatttgaatcaacagctaggttccacacaaaaccttcatttttca
gatgatgtatttgaagcacagaaagggccccttgaagtgggcggctccaccgcagccatg
acactggggcgcaaggcaccttgccaagccgacctaggtttcaggcttctggagttgagc
actccattggcagtttcttctgcagctttgccattctctagagttttgttctgtggcatt
gccttgggcctctcggatctgatatcgtggggtgagatgatagaggtactgacaacaact
gactctcagaaactgctacaccagctgaatgccctgttggaacaggagtctagatgtcag
ccaaaggtctgtggtttgagactaattgagtctgcacacgataatggcctcagaatgact
gcaagactaagggactttgaagtaaaagatcttcttagtctaactcagttctttggcttt
gacacagagacattttctctagctgtgaatttactggacagattcctgtctaaaatgaag
gtacagcccaagcaccttgggtgtgttggactgagctgcttttatttggctgtaaaatca
atagaagaggaaaggaatgtcccattggcaactgacttgatccgaataagtcaatatagg
tttacggtttcagacttgatgagaatggaaaagattgtattggagaagccttctgtgttg
gcattgtctatcattgcattagagatccaagcacagaagtgtgtagagttaacagaagga
atagaatgtcttcagaaacattccaagaaaacaggtgacatttgtatctacgataaaaat
ttttatacagaacctactgcctcaaactga

>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_4|145_aa
MPALEAALDILGARAWRHLNFNEHLLQGLVPLAPRGPARYHPTPLLKRGRHNPVPPGRGR
TRRSRAHARNPTLRLRLGLSARVTAHAQERKLALWCACSFFPLNGRLRHRQAPDERTEIQ
KSSHATNNGTELEPVKPELTTPSPK

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_4|438_bp
atgccggctctggaggccgcactggatatcctgggcgcgcgtgcctggcggcacctgaac
ttcaatgaacacctcctccaaggtctggtaccactggccccacggggtcccgcacggtac
caccccactccgctcctcaaacggggccgacataatccagtccctcccggccgcggccgc
accaggcggagccgagcgcacgcgcggaatcccacgcttaggctacgcctcggcctctcc
gctcgggtcactgcgcatgcgcaggaacgcaagctagcgctttggtgtgcgtgttcgttt
ttccctttgaatggccgtttacggcaccggcaggccccggatgaaagaactgaaatccag
aaaagttcacatgcaacgaacaatgggacagaattggaaccagtgaagccggaactcact
acaccgtcccctaagtga

>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_5|712_aa
MLYAGTVLLDLVYSFQKPSEEGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNL
NVDKDTTLPASARKVKSSESKIRVLLQERGAQDRRIQDLETELEKMEARLNAALREKTSL
SANNATLEKQLIELTRTNELLKSKGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVS
IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEEN
IVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQK
ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERL
VKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQ
FESYKALTASEIEDLKLENSSLQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTK
SALKETEIKEITVSFLQKITDLQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINK
WRLLYEELYNKTKPFQEVSKLRCQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKE
NFALKTPLKEEQLLVPKSVLVTVLQRNRTSKRYIEKLIYYEELADMIMKAEKACNLPFAG
WRPRKAGVVQYKLESLRTIIAEAFNGPSISFSASTNSNINLIQKYPHRQPLK

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_5|2139_bp
atgctgtatgctgggactgtgctactagatcttgtttattccttccaaaagccaagtgag
gaaggttgtgcaccatctccaggtgcttatgatgttaaaactttagaagtattgaaagga
ccagtatcctttcagaaatcacaaagatttaaacaacaaaaagaatctaaacaaaatctt
aatgttgacaaagatactaccttgcctgcttcagctagaaaagttaagtcttcggaatca
aagattcgtgttcttctacaggaacgtggtgcccaggacaggcggatccaggatctggaa
actgagttggaaaagatggaagcaaggctaaatgctgcactaagggaaaaaacatctctc
tctgcaaataatgctacactggaaaaacaacttattgaattgaccaggactaatgaacta
ctaaaatctaagggtatgatggctaagcaagaaggcatggagatgaagctgcaggtcacc
caaaggagtctcgaagagtctcaagggaaaatagcccaactggagggaaaacttgtttca
atagagaaagaaaagattgatgaaaaatctgaaacagaaaaactcttggaatacatcgaa
gaaattagttgtgcttcagatcaagtggaaaaatacaagctagatattgcccagttagaa
gaaaatttgaaagagaagaatgatgaaattttaagccttaagcagtctcttgaggagaat
attgttatattatctaaacaagtagaagatctaaatgtgaaatgtcagctgcttgaaaaa
gaaaaagaagaccatgtcaacaggaatagagaacacaacgaaaatctaaatgcagagatg
caaaacttaaaacagaagtttattcttgaacaacaggaacgtgaaaagcttcaacaaaaa
gaattacaaattgattcacttctgcaacaagagaaagaattatcttcgagtcttcatcag
aagctctgttcttttcaagaggaaatggttaaagagaagaatctgtttgaggaagaatta
aagcaaacactggatgagcttgataaattacagcaaaaggaggaacaagctgaaaggctg
gtcaagcaattggaagaggaagcaaaatctagagctgaagaattaaaactcctagaagaa
aagctgaaagggaaggaggctgaactggagaaaagtagtgctgctcatacccaggccacc
ctgcttttgcaggaaaagtatgacagtatggtgcaaagccttgaagatgttactgctcaa
tttgaaagctataaagcgttaacagccagtgagatagaagatcttaagctggagaactca
tcattacaggaaaaagcggccaaggctgggaaaaatgcagaggatgttcagcatcagatt
ttggcaactgagagctcaaatcaagaatatgtaaggatgcttctagatctgcagaccaag
tcagcactaaaggaaacagaaattaaagaaatcacagtttcttttcttcaaaaaataact
gatttgcagaaccaactcaagcaacaggaggaagactttagaaaacagctggaagatgaa
gaaggaagaaaagctgaaaaagaaaatacaacagcagaattaactgaagaaattaacaag
tggcgtctcctctatgaagaactatataataaaacaaaaccttttcaggaagtatcaaaa
ctccgctgtcagcttgctaaaaaaaaacaaagtgagacaaaacttcaagaggaattgaat
aaagttctaggtatcaaacactttgatccttcaaaggcttttcatcatgaaagtaaagaa
aattttgccctgaagaccccattaaaagaagaacaactcttggtaccaaaatctgtatta
gtcacagttctccagagaaacagaaccagtaagagatacatagaaaagttgatttactat
gaggaattggctgacatgattatgaaggctgagaaggcttgcaacctgccatttgcaggc
tggagacccaggaaagcaggtgttgttcagtacaagcttgaaagcctgagaaccatcata
gcagaagccttcaatggaccctcaatcagctttagtgcatccactaattcaaatattaac
ctcattcagaaataccctcacagacagcccctgaagtag

>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_6|323_aa
MPEMPEDMEQEEVNIPNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVN
LLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFL
IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEK
LEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWS
GNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPF
RIGIKESLWPFLIDKRWRQTVFH

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_6|972_bp
atgcctgaaatgccagaggacatggagcaggaggaagttaacatccctaataggagggtt
ctggttactggtgccactgggcttcttggcagagctgtacacaaagaatttcagcagaat
aattggcatgcagttggctgtggtttcagaagagcaagaccaaaatttgaacaggttaat
ctgttggattctaatgcagttcatcacatcattcatgattttcagccccatgttatagta
cattgtgcagcagagagaagaccagatgttgtagaaaatcagccagatgctgcctctcaa
cttaatgtggatgcttctgggaatttagcaaaggaagcagctgctgttggagcatttctc
atctacattagctcagattatgtatttgatggaacaaatccaccttacagagaggaagac
ataccagctcccctaaatttgtatggcaaaacaaaattagatggagaaaaggctgtcctg
gagaacaatctaggagctgctgttttgaggattcctattctgtatggggaagttgaaaag
ctcgaagaaagtgctgtgactgttatgtttgataaagtgcagttcagcaacaagtcagca
aacatggatcactggcagcagaggttccccacacatgtcaaagatgtggccactgtgtgc
cggcagctagcagagaagagaatgctggatccatcaattaagggaacctttcactggtct
ggcaatgaacagatgactaagtatgaaatggcatgtgcaattgcagatgccttcaacctc
cccagcagtcacttaagacctattactgacagccctgtcctaggagcacaacgtccgaga
aatgctcagcttgactgctccaaattggagaccttgggcattggccaacgaacaccattt
cgaattggaatcaaagaatcactttggcctttcctcattgacaagagatggagacaaacg
gtctttcattag

>gi568815593f:163339257_163542562|GENSCAN_predicted_peptide_7|204_aa
MAREDSTATTAEAFAMGHCHSWSTRLAHQPFVIRYKPTSRWLLLHFISSFKTFPEDHFTY
KNINISVLLLRKLKLSQVAKLAQAQTSRVFICKCQDLHSNSGLCDLKADTLPITRASEKQ
GLRTGPQAKEGDYLQKALTVEPSHLDLLWNLSQEATERCAAKTRKHNKVKEMKHSFGVNC
NYRRTLLKARTIIPLSTFQGPYVF

>gi568815593f:163339257_163542562|GENSCAN_predicted_CDS_7|615_bp
atggccagggaggattctactgccaccactgccgaggcatttgccatgggtcattgccat
tcttggagcaccagactggcccatcagcccttcgtgatacgatacaaacccacaagcagg
tggttgctgctccacttcatttcctcattcaaaacatttcctgaagatcatttcacttac
aagaacataaatatctctgttttactgttgaggaaactaaagctcagtcaagttgctaaa
cttgcccaagctcaaacttccagggtgtttatatgtaaatgccaagatttgcattcaaac
tcaggtctctgtgaccttaaagctgatactctcccaattacaagagccagtgaaaaacag
gggttgaggacagggccgcaagccaaggaaggtgattacctccaaaaggcactcacagtc
gagccttcacatttggatctgttatggaacctttctcaggaagctactgaaagatgtgca
gccaaaactagaaagcacaacaaagtgaaagaaatgaaacacagtttcggggtgaattgt
aactacagacgaacacttctgaaggccagaaccatcatccctctttcaactttccaagga
ccttatgtgttctaa