GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:04:15

Sequence gi568815586f:52849174_53052839 : 203666 bp : 48.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8451   8561  111  1  0   75   38    63 0.032   0.35
 1.02 Intr +  19631  19755  125  0  2   99   56    34 0.166   1.60
 1.03 Intr +  23664  23823  160  2  1   48   49   128 0.979   4.46
 1.04 Intr +  24645  24825  181  1  1   96   78   132 0.981  11.93
 1.05 Term +  25757  25829   73  2  1  101   44    56 0.608  -0.12
 1.06 PlyA +  29071  29076    6                               1.05

 2.00 Prom +  36058  36097   40                              -3.06
 2.01 Init +  36690  36933  244  2  1   50   84   131 0.373   6.80
 2.02 Term +  47640  47662   23  1  2   77   50    36 0.002  -2.83
 2.03 PlyA +  47858  47863    6                               1.05

 3.11 PlyA -  48043  48038    6                               1.05
 3.10 Term -  48445  48255  191  2  2  110   47   194 0.943  15.11
 3.09 Intr -  49346  49288   59  1  2   58   94    78 0.999   3.93
 3.08 Intr -  49726  49506  221  1  2  102   80   535 0.993  51.20
 3.07 Intr -  50892  50602  291  0  0  149   80   554 0.998  58.03
 3.06 Intr -  51510  51415   96  0  0  105   87   117 0.999  13.51
 3.05 Intr -  52046  51986   61  1  1  109  100   110 0.992  13.04
 3.04 Intr -  52899  52691  209  0  2  108   63   393 0.999  36.68
 3.03 Intr -  55797  55485  313  2  1   75  100   605 0.845  56.59
 3.02 Intr -  57574  57475  100  2  1   83   91    61 0.818   5.07
 3.01 Init -  63572  63518   55  2  1   99   75     2 0.341   1.24
 3.00 Prom -  64336  64297   40                              -3.36

 4.00 Prom +  64340  64379   40                              -7.26
 4.01 Init +  67545  67636   92  2  2   86   51    72 0.661   3.26
 4.02 Term +  68692  69121  430  1  1  -38   55   819 0.984  60.77
 4.03 PlyA +  69880  69885    6                               1.05

 5.00 Prom +  70771  70810   40                             -10.35
 5.01 Init +  71439  71572  134  2  2   65  115    80 0.402   7.34
 5.02 Intr +  76720  76746   27  1  0  109   91    13 0.203   0.93
 5.03 Intr + 100000 100417  418  1  1   84  110   591 0.032  54.93
 5.04 Intr + 101155 101237   83  0  2   67  108   175 0.999  15.84
 5.05 Intr + 101577 101818  242  0  2   90    7   333 0.681  22.59
 5.06 Intr + 102318 102472  155  1  2  -39   96   306 0.390  18.49
 5.07 Intr + 102558 102683  126  2  0   78  105   131 0.999  14.68
 5.08 Intr + 102946 103169  224  0  2  119   78   438 0.997  42.83
 5.09 Term + 103549 103669  121  1  1   81   46   129 0.982   5.95
 5.10 PlyA + 103709 103714    6                               1.05

 6.00 Prom + 122861 122900   40                              -5.26
 6.01 Init + 126604 126703  100  0  1  109   75    43 0.776   5.68
 6.02 Intr + 131158 131232   75  2  0   71   86    54 0.620   2.99
 6.03 Intr + 134121 134152   32  1  2   81   97     1 0.066  -1.85
 6.04 Intr + 153819 153900   82  2  1   82  106    49 0.105   5.31
 6.05 Intr + 167300 167437  138  0  0   52   48   136 0.976   6.44
 6.06 Intr + 169625 169833  209  0  2   78  101   136 0.999  12.70
 6.07 Intr + 170737 170853  117  0  0   92   88    98 0.985  10.86
 6.08 Intr + 172633 172687   55  0  1   21  116    81 0.964   2.75
 6.09 Intr + 173320 173454  135  2  0   42   98   155 0.996  12.44
 6.10 Intr + 178609 178746  138  2  0   67   76   253 0.999  22.44
 6.11 Intr + 178842 179015  174  1  0   53   75   173 0.807  12.41
 6.12 Intr + 184633 184861  229  2  1   22   85   191 0.528   9.13
 6.13 Intr + 185439 185536   98  0  2   62  100    26 0.715   0.85
 6.14 Intr + 188236 188449  214  2  1  101  113    99 0.963  11.47
 6.15 Intr + 190457 190529   73  2  1   90   94    50 0.978   5.21
 6.16 Term + 190970 191050   81  1  0   92   41   107 0.964   4.09
 6.17 PlyA + 191137 191142    6                               1.05

 7.00 Prom + 194136 194175   40                              -4.56
 7.01 Init + 198126 198200   75  2  0   85  109    77 0.567   8.59
 7.02 Intr + 200914 201087  174  0  0   59   53   106 0.283   4.34
 7.03 Intr + 202682 202790  109  1  1   92   78    85 0.924   7.76
 7.04 Intr + 203282 203319   38  0  2  117   98    17 0.867   3.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100417  417  1  0   80  110   586 0.966  56.43
S.002 Init + 157311 157323   13  2  1  115   99    15 0.859   5.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_1|216_aa
XEKYMLNSNPGYPDYPEHESFAFNLYHQATSTFHRYEAGIATPPPEGMEESKERMHSGQM
GQLAEPWAGQLVKAPVKGSAKQPNPQNRNPPTQRTTAPADRQTVPGEPDHCALPPTTTTL
GAPTLELMLLGEEQFLKQMTACGVADCGQRTSAVKTVAGNAPVPLSLANKAACLLQGGAE
CPAETFREELRGGARAPEGLGPDATLQARLNPYSSA

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_1|651_bp
nctgagaagtacatgctgaattctaacccaggatatcctgactatcctgaacatgagtca
ttcgcattcaacctttaccatcaagccacatcgacattccataggtatgaagctggaata
gccacccctccaccagaggggatggaggaatccaaagagagaatgcactcaggccagatg
gggcaactagcagagccatgggctgggcagctggtgaaggctccagtgaaggggagtgcc
aagcagccaaatccccaaaaccggaatccaccaacccagaggaccaccgcccctgctgac
cgccaaaccgtccctggagaaccagaccattgtgccctcccaccaaccacaaccaccctg
ggggcccccaccctggagctcatgctgttgggagaggaacaatttctgaagcagatgaca
gcgtgtggtgttgctgactgtggacagagaacttctgccgtcaagaccgtagcaggaaat
gcccctgtgcccctgagcctggcaaacaaggcagcctgtctccttcaaggaggagctgag
tgccccgcagagacattccgggaagagctcagagggggtgccagggcccctgaaggtctg
gggccagatgctaccctgcaggccaggctcaatccctacagcagtgcctga

>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_2|88_aa
MASKAGNLYVPAEPNQVGGHQNQRYQCVSPQDQKVLQLFHLCQIFNGSFVKLNKASTNML
RIVEPYIAWGYPNMKSVNELIYSPDAKV

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_2|267_bp
atggcaagcaaagctggcaacctctatgtacctgcagaacccaaccaagttggcggtcat
cagaatcagaggtatcaatgtgtgagcccacaggaccaaaaggtattgcaactttttcac
ctttgtcaaatcttcaatggaagctttgtgaagctcaacaaggcttccactaacatgctg
aggattgtagaaccatatattgcatgggggtacccaaatatgaagtcagtaaatgaacta
atctatagtcctgatgccaaggtgtag

>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_3|531_aa
MAMEKAGNSLNCGCLSVSGDLAVICWSSEFSFIQSPHHTLQYLPENPAPAIRVTQKSYKV
STSGPRAFSSRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSL
LSPLVLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTA
RSNMDNMFESYINNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENE
FVLIKKDVDEAYMNKVELESRLEGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSR
SLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHGDDLRRTKTEISEMNR
NISRLQAEIEGLKGQRASLEAAIADAEQRGELAIKDANAKLSELEAALQRAKQDMARQLR
EYQELMNVKLALDIEIATYRKLLEGEESRLESGMQNMSIHTKTTSGYAGGLSSAYGGLTS
PGLSYSLGSSFGSGAGSSSFSRTSSSRAVVVKKIETRDGKLVSESSDVLPK

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_3|1596_bp
atggccatggaaaaggctgggaatagcctaaactgtggctgcctctctgtgtcaggggat
ctggctgtcatctgttggtcctctgagttcagtttcatccagtccccacatcacaccctg
cagtatcttccagagaacccagccccagccatcagggtgacccagaagtcctacaaggtg
tccacctctggcccccgggccttcagcagccgctcctacacgagtgggcccggttcccgc
atcagctcctcgagcttctcccgagtgggcagcagcaactttcgcggtggcctgggcggc
ggctatggtggggccagcggcatgggaggcatcaccgcagttacggtcaaccagagcctg
ctgagcccccttgtcctggaggtggaccccaacatccaggccgtgcgcacccaggagaag
gagcagatcaagaccctcaacaacaagtttgcctccttcatagacaaggtacggttcctg
gagcagcagaacaagatgctggagaccaagtggagcctcctgcagcagcagaagacggct
cgaagcaacatggacaacatgttcgagagctacatcaacaaccttaggcggcagctggag
actctgggccaggagaagctgaagctggaggcggagcttggcaacatgcaggggctggtg
gaggacttcaagaacaagtatgaggatgagatcaataagcgtacagagatggagaacgaa
tttgtcctcatcaagaaggatgtggatgaagcttacatgaacaaggtagagctggagtct
cgcctggaagggctgaccgacgagatcaacttcctcaggcagctatatgaagaggagatc
cgggagctgcagtcccagatctcggacacatctgtggtgctgtccatggacaacagccgc
tccctggacatggacagcatcattgctgaggtcaaggcacagtacgaggatattgccaac
cgcagccgggctgaggctgagagcatgtaccagatcaagtatgaggagctgcagagcctg
gctgggaagcacggggatgacctgcggcgcacaaagactgagatctctgagatgaaccgg
aacatcagccggctccaggctgagattgagggcctcaaaggccagagggcttccctggag
gccgccattgcagatgccgagcagcgtggagagctggccattaaggatgccaacgccaag
ttgtccgagctggaggccgccctgcagcgggccaagcaggacatggcgcggcagctgcgt
gagtaccaggagctgatgaacgtcaagctggccctggacatcgagatcgccacctacagg
aagctgctggagggcgaggagagccggctggagtctgggatgcagaacatgagtattcat
acgaagaccaccagcggctatgcaggtggtctgagctcggcctatgggggcctcacaagc
cccggcctcagctacagcctgggctccagctttggctctggcgcgggctccagctccttc
agccgcaccagctcctccagggccgtggttgtgaagaagatcgagacacgtgatgggaag
ctggtgtctgagtcctctgacgtcctgcccaagtga

>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_4|173_aa
MRLSQNPPQSSAAEASVDKPAFSHADHAGAGKTSSQKKKKKEKEEKEKKKKEKEKRKKRK
RKKKKRKRKKKKKERKERKKKEKKKRRRRRRRRGRRRRRRRGGGGEEEEEEEEEEEEEEG
GGEGEGEGEEEEEEEEEEEEEEEEQEEEEEEEEEEEEEEEEETKQSLRQLGSS

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_4|522_bp
atgaggctgtctcaaaacccaccacagtcctcagcagcagaagcaagtgtggacaagccc
gccttctcgcatgctgaccatgctggagcaggcaagacttcatctcaaaagaagaagaag
aaggagaaggaggagaaggagaaaaagaagaaggagaaggagaagaggaagaagaggaag
aggaagaagaagaagaggaagaggaagaagaagaagaaggagaggaaggagaggaagaag
aaggagaagaagaagaggaggaggagaagaagaagaagaggaagaagaaggagaagaaga
agaggaggaggaggagaagaagaagaggaagaagaagaagaagaagaggaagaagaagga
gggggagagggagagggagaaggggaagaagaagaagaagaggaagaggaagaagaagaa
gaagaagaagaacaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaaacaaaacagagtctgcgtcaactgggaagttcatga

>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_5|509_aa
MDSPMRAETLTMLLTVTSTALERHLTGTPPVYDERIHKWLNQPARAHYSELGPSMSFTTR
STFSTNYRSLGSVQAPSYGARPVSSAASVYAGAGGSGSRISVSRSTSFRGGMGSGGLATG
IAGGLAGMGGIQNEKETMQSLNDRLASYLDRVRSLETENRRLESKIREHLEKKGPQVRDW
SHYFKIIEDLRAQIFANTVDNARIVLQIDNARLAADDFRVKYETELAMRQSVENDIHGLR
KVIDDTNITRLQLETEIEALKEELLFMKKNHEEASRGHWPGQGLRGQEKSGSENRQDKPT
ASLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIEESTTV
VTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVEARYALQMEQLNGI
LLHLESELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNLGDALDSSNS
MQTIQKTTTRRIVDGKVVSETNDTKVLRH

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_5|1530_bp
atggacagccccatgagggcagagaccttgactatgttgttgaccgtcacatccacagca
ttagaaagacatctaacaggcactccaccagtatatgatgaacgaattcacaaatggctg
aaccagcctgccagggcccattactctgagctgggccccagcatgagcttcaccactcgc
tccaccttctccaccaactaccggtccctgggctctgtccaggcgcccagctacggcgcc
cggccggtcagcagcgcggccagcgtctatgcaggcgctgggggctctggttcccggatc
tccgtgtcccgctccaccagcttcaggggcggcatggggtccgggggcctggccaccggg
atagccgggggtctggcaggaatgggaggcatccagaacgagaaggagaccatgcaaagc
ctgaacgaccgcctggcctcttacctggacagagtgaggagcctggagaccgagaaccgg
aggctggagagcaaaatccgggagcacttggagaagaagggaccccaggtcagagactgg
agccattacttcaagatcatcgaggacctgagggctcagatcttcgcaaatactgtggac
aatgcccgcatcgttctgcagattgacaatgcccgtcttgctgctgatgactttagagtc
aagtatgagacagagctggccatgcgccagtctgtggagaacgacatccatgggctccgc
aaggtcattgatgacaccaatatcacacgactgcagctggagacagagatcgaggctctc
aaggaggagctgctcttcatgaagaagaaccacgaagaggcaagcaggggccactggcca
ggccagggattgaggggccaagagaagtctgggtcggagaatagacaagacaaaccaact
gcaagcctacaagcccagattgccagctctgggttgaccgtggaggtagatgcccccaaa
tctcaggacctcgccaagatcatggcagacatccgggcccaatatgacgagctggctcgg
aagaaccgagaggagctagacaagtactggtctcagcagattgaggagagcaccacagtg
gtcaccacacagtctgctgaggttggagctgctgagacgacgctcacagagctgagacgt
acagtccagtccttggagatcgacctggactccatgagaaatctgaaggccagcttggag
aacagcctgagggaggtggaggcccgctacgccctacagatggagcagctcaacgggatc
ctgctgcaccttgagtcagagctggcacagacccgggcagagggacagcgccaggcccag
gagtatgaggccctgctgaacatcaaggtcaagctggaggctgagatcgccacctaccgc
cgcctgctggaagatggcgaggactttaatcttggtgatgccttggacagcagcaactcc
atgcaaaccatccaaaagaccaccacccgccggatagtggatggcaaagtggtgtctgag
accaatgacaccaaagttctgaggcattaa

>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_6|649_aa
MEKPHGMQCTESFPGLRQALWPRKVHPVLCYLGAISPSPSEALAKCSGIQKELDEYGEGV
CKEGSSITKKGVQIQALREGSWTSCKKEFWASPKSETKKKNKKGKTISLTDFLAEDGGTG
GGSTYVSKPVSWADETDDLEGDVSTTWHSNDDDVYRAPPIDRSILPTAPRAAREPNIDRS
RLPKSPPYTAFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLD
SLLSALSLNEESLGNRRIRVDVADQAQDKDRDDRSFGRDRNRDSDKTDTDWRARPATDSF
DDYPPRRGDDSFGDKYRDRYDSDRYRDGYRDGYRDGPRRDMDRYGGRDRYDDRGSRDYDR
GYDSRIGSGRRAFGSGYRRDDDYRGGGDRYEDRYDRRDDRSWSSRDDYSRDDYRRDDRGP
PQRPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKPVDTAAREREVEERLQKEQEKLQ
RQLDEPKLERRPRERHPSWRSEETQERERSRTGSESSQTGTSTTSSRNARRRESEKSLEN
ETLNKEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVKRSSNPPARSQSSDTEQQSPTRK
DGKKDQDSRSAPEPKKPEENPASKFSSASKYAALSVDGEDENEGEDYAE

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_6|1950_bp
atggagaagccacatggcatgcagtgtacggaatccttccctggactgcgccaggccctc
tggcccagaaaggttcatcctgtcctgtgctacctgggagcgatctctccctcaccttcc
gaggctctggctaaatgctctggtatacagaaggagcttgatgagtatggggaaggggtt
tgtaaggaaggcagtagcataacaaagaaaggggtccagatccaggccctacgagagggt
tcttggacctcatgcaagaaagaattctgggcaagtccaaaaagtgaaacaaaaaagaag
aataagaaggggaagactatctccctaacagactttctggctgaggatgggggtactggt
ggaggaagcacctatgtttccaaaccagtcagctgggctgatgaaacggatgacctggaa
ggagatgtttcgaccacttggcacagtaacgatgacgatgtgtatagggcgcctccaatt
gaccgttccatccttcccactgctccacgggctgctcgggaacccaatatcgaccggagc
cgtcttcccaaatcgccaccctacactgcttttctaggaaacctaccctatgatgttaca
gaagagtcaattaaggaattctttcgaggattaaatatcagtgcagtgcgtttaccacgt
gaacccagcaatccagagaggttgaaaggttttggttatgctgaatttgaggacctggat
tccctgctcagtgccctgagtctcaatgaagagtctctaggtaacaggagaattcgagtg
gacgttgctgatcaagcacaggataaagacagggatgatcgttcttttggccgtgataga
aatcgggattctgacaaaacagatacagactggagggctcgtcctgctacagacagcttt
gatgactacccacctagaagaggtgatgatagctttggagacaagtatcgagatcgttat
gattcagaccggtatcgggatgggtatcgggatgggtatcgggatggcccacgccgggat
atggatcgatatggtggccgggatcgctatgatgaccgaggcagcagagactatgataga
ggctatgattcccggataggcagtggcagaagagcatttggcagtgggtatcgcagggat
gatgactacagaggaggcggggaccgctatgaagaccgatatgacagacgggatgatcgg
tcgtggagctccagagatgattactctcgggatgattataggcgtgatgatagaggtccc
ccccaaagacccaaactgaatctaaagcctcggagtactcctaaggaagatgattcctct
gctagtacctcccagtccactcgagctgcttctatctttggaggggcaaagcctgttgac
acagctgctagagaaagagaagtagaagaacggctacagaaggaacaagagaagttgcag
cgtcagctggatgagccaaaactagaacgacggcctcgggagagacacccaagctggcga
agtgaagaaactcaggaacgggaacggtcgaggacaggaagtgagtcatcacaaactggg
acctccaccacatctagcagaaatgcacgaaggagagagagtgagaagtctctagaaaat
gaaacactcaataaggaggaagattgccactctccaacttctaaacctcccaaacctgat
cagcccctaaaggtaatgccagcccctccaccaaaggagaatgcttgggtgaagcgaagt
tctaaccctcctgctcgatctcagagctcagacacagagcagcagtcccctacaaggaaa
gatggcaaaaaggatcaagactccagatctgcacctgagccaaagaaacctgaggaaaat
ccagcttccaagttcagttctgcaagcaagtatgctgctctctctgttgatggtgaagat
gaaaatgagggagaagattatgccgaatag

>gi568815586f:52849174_53052839|GENSCAN_predicted_peptide_7|132_aa
MGWPGGSPCCCPAPPRPRPAGRPPQGKRLPPPGRFQEAPGQAPALFRPWGQHPSQPNTMK
SSGPVERLLRALGRRDSSRAASRPRKAEPHSFREKVFRKKPPVCAVCKVTIDGTGVSCRV
CKVATHRKCEAK

>gi568815586f:52849174_53052839|GENSCAN_predicted_CDS_7|396_bp
atgggctggcccggcggctccccctgctgctgccccgccccgccgcgcccccgcccggcc
gggcgccccccgcaggggaagcggctgcctccgccaggccgcttccaggaagccccgggc
caggccccagcattgttcaggccctggggccagcaccccagccagccgaacaccatgaag
tccagcggccctgtggagaggctgctcagagccctggggaggagggacagcagccgggcc
gcaagcaggcctaggaaagctgagcctcatagcttccgggagaaggttttccggaagaaa
cctccagtctgtgcagtatgtaaggtgaccatcgatgggacaggcgtttcgtgcagagtc
tgcaaggtggcgacgcacagaaaatgtgaagcaaag