GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:08:27

Sequence gi568815596r:210088964_210325263 : 236300 bp : 36.60% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -  15338  15141  198  2  0   88  103   247 0.734  24.83
 1.03 Intr -  27235  27072  164  2  2   72   73   143 0.166   9.97
 1.02 Intr -  31093  31068   26  0  2   85   75    34 0.012  -1.45
 1.01 Init -  65619  64532 1088  0  2   92   84   607 0.025  54.62
 1.00 Prom -  67902  67863   40                              -3.95

 2.19 PlyA -  67911  67906    6                               1.05
 2.18 Term -  75659  75630   30  2  0  106   32    54 0.166  -1.52
 2.17 Intr -  81679  81590   90  1  0   89   70    34 0.150   0.97
 2.16 Intr -  82444  82285  160  0  1   39   39   262 0.068  15.47
 2.15 Intr - 103927 103841   87  0  0   53  106    60 0.517   2.47
 2.14 Intr - 106375 106248  128  1  2   47   64    70 0.584  -0.94
 2.13 Intr - 114481 114368  114  1  0   88  115    93 0.999  11.72
 2.12 Intr - 115719 115618  102  0  0   59   71   111 0.984   5.95
 2.11 Intr - 116833 116669  165  1  0   74  109   118 0.999  11.74
 2.10 Intr - 121299 121233   67  2  1   90   93    55 0.995   4.19
 2.09 Intr - 126190 126122   69  0  0   16   84   131 0.879   2.88
 2.08 Intr - 127548 127384  165  2  0   72  115   131 0.999  12.35
 2.07 Intr - 129139 129002  138  0  0   68   92   113 0.997   8.36
 2.06 Intr - 131839 131684  156  0  0   31   89   185 0.999  11.10
 2.05 Intr - 136086 135872  215  0  2   23   20   181 0.223   1.39
 2.04 Intr - 136644 136224  421  2  1   51  101   295 0.292  20.12
 2.03 Intr - 144602 144561   42  1  0  119   90    50 0.306   4.74
 2.02 Intr - 161754 161688   67  1  1   89  115    37 0.064   3.54
 2.01 Init - 183201 183192   10  0  1   91   93     4 0.095   1.95
 2.00 Prom - 185763 185724   40                              -4.05

 3.02 PlyA - 186243 186238    6                               1.05
 3.01 Sngl - 193181 192804  378  2  0   84   31   218 0.980  11.61
 3.00 Prom - 193780 193741   40                              -8.35

 4.07 PlyA - 194133 194128    6                               1.05
 4.06 Term - 195702 195581  122  1  2   50   49    79 0.082  -2.14
 4.05 Intr - 204837 204760   78  1  0   29   70   138 0.791   4.70
 4.04 Intr - 205455 205282  174  1  0   57   82   194 0.919  14.69
 4.03 Intr - 209600 209457  144  0  0   72   86    75 0.950   5.03
 4.02 Intr - 213829 213805   25  1  1   78  119    44 0.527   3.18
 4.01 Init - 226079 225948  132  2  0   61   88   127 0.663  10.48
 4.00 Prom - 229669 229630   40                               0.25


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:210088964_210325263|GENSCAN_predicted_peptide_1|492_aa
MTPALREATAKGISFSSLPSTMESDKMLYMESPRTVDEKLKGDTFSQMLGFPTPEPTLNT
NFVNLKHFGSPQSSKHYQTVFLMRSNSTLNKHNENYKQKKLGEPSCNKLKNILYNGSNIQ
LSKICLSHSEEFIKKEPLSDTTSQCMKDVQIILDSNITKDTNVDKVQLQNCKWYQENALL
DKVTDAEIKKGLLHCTQKKIVPGHSNVPVSSSAAEKEEEVHARLLHCVSKQKILLSQARR
TQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGNSLPKCTEIKPEVNTLT
AENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGLDSDATDSSSDDDLDEYTLRKN
VAVFVEDQTVVEQSLPMATTAPGPQQVLPVYGQCLLKAQGFFSQLLVNAASPESLPSGQW
APLWTRGIVVLEECQLPKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMSPS
SPTLLLRNIEKQ

>gi568815596r:210088964_210325263|GENSCAN_predicted_CDS_1|1476_bp
atgaccccagctctgagggaggcaacagcaaagggtatcagcttttcatctttgccaagt
accatggagtctgacaagatgctctacatggaaagtcccagaactgtagatgaaaagcta
aagggagacaccttttctcagatgcttggatttccaactcctgaacctactcttaatact
aattttgtgaatttaaaacattttggctcccctcagtcttcaaaacattaccagactgtt
tttttaatgagatctaattctacattaaataaacacaatgagaattataaacaaaagaaa
ttaggggagcccagttgcaataagctgaaaaacatactgtataatggcagcaacattcag
ctcagtaaaatctgtctttctcattctgaagagttcatcaaaaaggagcctctatcagat
accacgagccagtgcatgaaagatgtacaaattattctggattcaaatataaccaaagac
actaatgtagataaagtacaactacaaaactgtaaatggtatcaagagaatgcacttttg
gataaagttactgatgctgagattaaaaagggtttattgcactgtactcaaaagaaaatt
gtacctggccactcaaatgtgcctgttagttcttcagctgctgaaaaagaggaggaagta
catgctcgtttacttcattgtgtaagcaaacagaaaattttacttagccaggctagaaga
actcagaaacatttgcagatgctcctggcaaagcatgttgttaagcactatggtcagcag
atgaaattgtctatgaaacatcaactccccaaaatgaagacatttcatgaacctaccaca
attttgggtaatagtttacctaaatgcactgaaattaagccagaagttaacacattgact
gcagagaataaattgtgggatgatgcaaaaaatggctttgcacggtgtacagctgcggaa
atccaaagatttgcattttctgctacagggctgttgtctcatgttgaagagggtttggat
tccgatgcaactgatagcagctctgatgacgatttggatgaatatacccttagaaaaaat
gtggcagtgtttgttgaagatcagacagttgtagagcagtcccttcccatggccaccact
gccccagggccacagcaagtactgcctgtctacggccaatgtttactaaaggcccaaggc
ttcttcagtcagcttttggtgaatgctgccagtcctgagtctctcccttcaggacagtgg
gctcccctctggaccagggggatagtggtcctagaagaatgtcagcttccaaaagatatt
ttgaaaaaacaaatgcaatttgcagaccaagcagcttcactaaacattctagggaatcct
caggttccccaggagtgtcaagatcctgtaccggaacaagattttgaaatgtcaccaagc
agccctactttacttcttcgaaacatcgaaaaacag

>gi568815596r:210088964_210325263|GENSCAN_predicted_peptide_2|741_aa
MQNSGIKEVVNYGAGFSLQAHRLLRRHFFIRFSIYLVNPGYLRVFGGSIAFIRYSKRFRT
LKRLRAASINKKECCKQRQQFRCKILLLTAKTGVFPRDQPVAWLGLRKGARERFFGRTPQ
VDASADRPPSRGPCPESPSSRRVASVAPPPLCFGHGRTPSPRVPTRPGRPPCAAPAARRA
SWPPFLDPADWVQPASGRRKKGCQPCRPENRPPSPRRGKPKDFSRSSFRSPNPTRLVQRP
AVGPGSLRFGRRCSHSGGEERLETPSAKKLTDIGIRRIFSPEHDIFRKSVRKFFQEEVIP
HHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCSGPGF
SIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGRQQQLVGQQKANSAKK
ELKDAKEVDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGIS
LFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQE
RLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFVDNC
LQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKPRQGSVPPSRT
ELRAAGGLLNRGGGGGGGGGGGGGGGRGGSGARSGDESAAPRENVDLGFRVRWDRAESRG
FLRDGASKFVSPVLRSSASLD

>gi568815596r:210088964_210325263|GENSCAN_predicted_CDS_2|2226_bp
atgcagaactctggtataaaagaagttgtcaattatggtgctggtttttctctacaagct
cacagacttctgagaagacacttttttattcgatttagcatctacctggttaatccaggg
tatttgcgcgtatttgggggctccatagctttcatccgttactcaaagcgcttcaggacg
ctaaaaaggctcagagctgcttcgataaacaagaaagaatgctgcaagcaaaggcagcag
tttcgctgtaaaatcctattgctgacagccaagacgggcgtattccctcgcgaccagcct
gtggcgtggttggggctccggaagggcgcgcgcgagcgcttttttgggaggacaccacag
gtggacgcctcagctgatcgtcctccctcccggggaccctgccccgagtcgccgagtagc
cgcagagtcgcctccgtcgccccgccgcccctgtgtttcggacatggccgcacgccttct
ccgagggtccctacgcgtcctgggcggccaccgtgcgccgcgccagctgcccgccgcgcg
agctggcctcctttcctggatcccgcggactgggtgcaaccagcatctgggcggaggaaa
aaggggtgtcagccgtgccgccccgagaacagaccgccgagcccacgtcggggaaagccg
aaagatttctccagaagttcattccggagccccaatccaacccgtctagttcagcggcct
gcagtgggacccgggagcctgcgttttgggaggagatgttctcattccggaggggaagaa
cgtctagaaactccttctgctaaaaaattaacagatataggaattcgaagaatcttttct
ccagagcatgacattttccggaaaagtgtaaggaagtttttccaagaagaagtgattcct
catcactcagaatgggagaaagctggagaagtaagtagggaggtttgggaaaaagctgga
aaacaaggactgcttggtgtcaatattgcagagcatcttggtggaattggaggggatctg
tactccgcagctattgtctgggaggagcaagcttattcaaattgttcaggcccaggtttt
agtattcattcaggtattgtcatgtcctatattacaaaccatggctcagaagaacagatt
aagcactttattccccagatgactgcaggcaaatgtattggtgcaatagcaatgacagag
cctggagctggaagacagcagcaacttgtgggtcaacagaaagcaaatagtgcaaagaaa
gaacttaaagatgccaaagaagttgacttacagggaataaaaacaaatgctaaaaaggat
ggaagtgactggattctcaatggaagcaaggtgttcatcagtaatgggtcattaagtgat
gttgtgattgtagttgcggtcacaaatcatgaagctccctcccctgcccatggtattagc
ctttttctggtggaaaatggaatgaaaggatttatcaagggacgaaagctacataaaatg
ggattaaaagcccaggataccgcagaactattctttgaagatatacggttgccagctagt
gccctacttggagaagagaataaaggcttctattacatcatgaaagagcttccacaggaa
aggctgttaattgctgatgtggcaatttcagctagtgaattcatgtttgaagaaaccagg
aactatgttaaacaaagaaaagcttttggcaaaacagttgctcacctacagacagtgcaa
cataaattagcagaattaaaaacacatatatgtgtaacccgagcatttgtggacaactgt
ctccagctgcatgaagcgaaacgtttggactccgccactgcttgcatggcgaaatattgg
gcatctgagttacaaaatagtgtagcttacgactgtgtacagctccatggaggttgggga
tacatgtgggagtacccaattgcaaaaccgcggcagggttccgtccccccgagccgcacg
gagctgcgggcagcgggcggactgttaaaccgcggcggcggcggcggcggcggcggcggc
ggcggcggcggcggcggccggggcgggagcggggcgcgctctggagacgagtcagcggcg
ccccgggaaaacgtagatttgggctttagagttagatgggatagagcagaatctagggga
tttttgagggacggtgcttccaagtttgtgtcaccggttcttcgaagttctgcatcatta
gactaa

>gi568815596r:210088964_210325263|GENSCAN_predicted_peptide_3|125_aa
MESIIKSLPSKKSPGPNHFHAEFYQKFKDELSPILRKFYQKTEEERILPNSFYDVGIALI
PKPDKDTRKENYRSISLMNMDPKILKMLANQIHQHIKKIIHHDQVEQIHLKIYTISIDAE
KKHLI

>gi568815596r:210088964_210325263|GENSCAN_predicted_CDS_3|378_bp
atggaatctataataaaaagtcttccatcaaagaaaagcccaggacctaatcacttccat
gctgaattctatcaaaaatttaaagacgaactaagtccaattcttcgcaaattctaccaa
aaaactgaagaggagagaattcttccaaactcattctatgatgtcggcattgccctgata
ccaaaaccagacaaggacacaagaaaagaaaactatagatcaatatccctgatgaacatg
gatccaaaaattctcaaaatgctagcaaaccaaattcaccaacacattaaaaagattatt
caccatgatcaagtggaacagatccacttgaaaatatataccatttcaatagatgcagaa
aaaaagcatttgatctaa

>gi568815596r:210088964_210325263|GENSCAN_predicted_peptide_4|224_aa
MAPKKDVKKPVAAAAAAPAPAPAPAPAPAPAKPKEEKIDLSAIKSFSADQIAEFKEAFLL
FDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAIS
NNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDSNGC
INYEATLKTSIWNLVSLQLPVGCVRPDTKMGLLSYVSPLWRKLE

>gi568815596r:210088964_210325263|GENSCAN_predicted_CDS_4|675_bp
atggcaccaaagaaagacgtgaagaaacctgtggctgcggctgcggctgccccagccccg
gcaccggcacctgcacctgcccctgccccagccaaacccaaagaagaaaaaattgacctc
tctgccattaagtccttcagtgctgaccagattgctgaattcaaggaggcatttctcctg
tttgacagaacaggtgattccaagatcaccttaagccaggtcggtgatgtccttcgagct
ctgggcacaaatcccaccaatgcagaggtcaggaaagttctgggaaaccccagcaatgaa
gagctgaatgccaagaaaattgagtttgaacaatttctgcctatgatgcaagccatttcc
aacaacaaggaccaggccacctatgaagactttgttgagggtctgcgtgtctttgacaag
gaaggcaatggcacagtcatgggtgctgaactccgccatgttctagccaccctgggtgaa
aagatgaaagaggaagaagtggaagccctgatggcaggtcaagaagactccaatggctgc
atcaactacgaagccactctgaaaaccagtatctggaacctggtgtcactacaactgcct
gtaggctgtgtcagacctgacaccaagatgggtctcctcagttatgtctccccactgtgg
agaaaattagaatag