GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:23:36

Sequence gi568815596r:232668194_232871362 : 203169 bp : 40.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4116   4250  135  2  0  111  100   210 0.992  24.34
 1.02 Term +  13392  13526  135  2  0  116   37   207 0.842  15.44
 1.03 PlyA +  14559  14564    6                               1.05

 2.00 Prom +  17456  17495   40                              -5.75
 2.01 Init +  18102  18147   46  2  1   94   58    18 0.754   0.31
 2.02 Intr +  18454  18528   75  2  0  139  110    41 0.911   9.97
 2.03 Intr +  22122  22188   67  1  1   96  106   -29 0.399  -3.26
 2.04 Intr +  24139  24236   98  1  2   99   89    86 0.463   8.53
 2.05 Intr +  25012  25070   59  2  2   60   62    27 0.396  -5.02
 2.06 Intr +  28709  28894  186  1  0   87   80   106 0.641   8.66
 2.07 Intr +  29200  29386  187  0  1   81   71    45 0.521   0.44
 2.08 Term +  29719  29831  113  2  2   79   43   114 0.841   3.74
 2.09 PlyA +  32621  32626    6                               1.05

 3.03 PlyA -  32748  32743    6                               1.05
 3.02 Term -  62026  61652  375  1  0   98   49   474 0.927  38.25
 3.01 Init -  64589  64587    3  2  0   90   54     0 0.155  -3.15
 3.00 Prom -  65563  65524   40                              -7.75

 4.00 Prom +  65932  65971   40                              -8.65
 4.01 Init +  67005  67045   41  2  2   51  101    68 0.464   4.11
 4.02 Intr +  79422  79551  130  0  1  118  116   107 0.981  16.28
 4.03 Intr +  80794  80889   96  0  0   87   72   100 0.983   7.59
 4.04 Intr +  88030  88141  112  0  1  100   83    98 0.920   9.53
 4.05 Intr +  92287  92398  112  2  1  116   88    38 0.913   5.12
 4.06 Intr +  93203  93243   41  2  2  109   82    69 0.633   5.35
 4.07 Term +  96199  96323  125  2  2   83   37    38 0.209  -4.23
 4.08 PlyA +  97028  97033    6                              -0.45

 5.03 PlyA -  98033  98028    6                               1.05
 5.02 Term - 100620  99998  623  1  2   54   47   522 0.999  38.29
 5.01 Init - 103169 102710  460  2  1   71   91   302 0.983  24.76
 5.00 Prom - 107429 107390   40                              -6.05

 6.00 Prom + 107725 107764   40                              -4.95
 6.01 Init + 116946 117013   68  2  2   65  110    11 0.483   1.60
 6.02 Intr + 117380 117450   71  2  2   73   85     0 0.299  -3.89
 6.03 Intr + 118957 119136  180  2  0  102   99   131 0.985  14.52
 6.04 Intr + 122505 122722  218  1  2   93   69   291 0.731  25.00
 6.05 Intr + 122815 122977  163  0  1   98   87   238 0.994  23.33
 6.06 Intr + 123065 123253  189  0  0   49   80   225 0.961  16.44
 6.07 Intr + 126555 126751  197  1  2   84   98   244 0.991  23.21
 6.08 Intr + 127869 128060  192  2  0   78   28    92 0.645   0.97
 6.09 Intr + 130752 130845   94  2  1   56  103    74 0.939   4.32
 6.10 Intr + 138298 138464  167  2  2   67  115    63 0.942   5.66
 6.11 Intr + 141527 141618   92  1  2   83   61   136 0.999   8.27
 6.12 Intr + 143051 143158  108  2  0   39   73   140 0.983   6.08
 6.13 Intr + 144198 144298  101  0  2   97   98    58 0.998   6.53
 6.14 Intr + 147444 147544  101  1  2  100   47   159 0.537  11.91
 6.15 Intr + 148678 148839  162  0  0   32   91   320 0.535  25.95
 6.16 Intr + 151634 151792  159  1  0  136   60   251 0.998  26.36
 6.17 Intr + 156296 156521  226  1  1  -17   32   263 0.284   6.84
 6.18 Intr + 163434 163591  158  1  2   45   26    63 0.449  -5.39
 6.19 Intr + 164664 164900  237  2  0   47   98   560 0.988  49.79
 6.20 Intr + 171656 171778  123  1  0   78   83   180 0.998  16.36
 6.21 Intr + 175853 176062  210  1  0   43   78   402 0.997  32.89
 6.22 Intr + 176176 176381  206  0  2  108   91    90 0.977   8.38
 6.23 Intr + 177539 177693  155  2  2   50   95   200 0.980  15.69
 6.24 Intr + 179155 179378  224  2  2  116   75   386 0.974  37.02
 6.25 Intr + 182069 182216  148  1  1   95   71    79 0.966   5.79
 6.26 Term + 188600 188667   68  0  2   84   53   157 0.954   8.92
 6.27 PlyA + 190397 190402    6                               1.05

 7.00 Prom + 199230 199269   40                              -6.55
 7.01 Init + 202149 202221   73  2  1   90  110   178 0.820  19.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_1|89_aa
FLLIFHKAAAGELQEDSGLMALAKLSEIDVALEGVKGAKNFFEAKVQALSSASKFEAELK
AEQDERKREEEERRLRQAAFQKLKANFNT

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_1|270_bp
ttcctgctcattttccacaaggccgcggcaggggagctgcaggaggacagtgggctgatg
gcgctggcaaagctttctgagatcgatgtggccctggagggtgtcaaaggtgccaagaac
ttctttgaagccaaggtccaagccttgtcatcggccagtaagtttgaagcagagttgaaa
gctgagcaagatgagcggaagcgggaggaggaggagaggcggctccgccaggcagccttc
cagaaactcaaggccaacttcaatacatag

>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_2|276_aa
MVTAQTFIGSFLGLYRGLLLTVEDSAQRLSSGSFLDASRPVGRNKAMCICPFSHCYKELP
EVGLEYSGIIIAHDIIKLLDSKDPSTSDSQVAETTGSFRDCQTVFASNKTVSGSKDGNCE
EKCRTKSCGKVLIWKTSPQVMQRLLNCKRALGVQDSESHGAWSGPNPGHQHHSTQGQVTS
RSVSLPCPALLRAPAPPPRPGPPVSPVRVRAPAPPARAGPAAWTPTGRSGRLGPSGDGTE
HLDGGDSFRGESTGSGPGLRRGAATMIGTLGPRLGN

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_2|831_bp
atggtcacagctcagaccttcataggttccttcctgggtctctaccgtggattacttctc
actgttgaagactcagctcagagattatcttcaggaagcttccttgatgcttccaggcca
gttgggaggaataaagccatgtgtatttgtccgttctcacattgctataaagaactacct
gaggttgggctggagtacagtggcataatcatagctcacgacatcatcaaactcctggac
tcaaaagatccttccacctcagactcccaagtagctgaaactacaggcagcttcagggac
tgccaaactgtttttgcttcaaacaagactgtttcaggaagcaaggatggcaactgcgaa
gaaaaatgccggactaaaagctgtggaaaagttctaatttggaaaaccagcccgcaagtg
atgcagaggcttttgaactgcaaaagagctctgggcgtacaggacagtgagtcacacggt
gcctggtccgggcccaaccctggacaccaacaccactcaactcaagggcaggtaaccagc
cgttccgtgtcgctcccctgcccggctctgctccgcgccccggccccgccgccgcgtccc
gggccgcctgtgtctccggtccgcgttcgcgcccctgctcctcctgcccgagctggcccg
gccgcatggacacccacaggccgctccggccggcttgggccgtcaggcgacgggacagag
catctggacggaggagactccttccgtggcgagagtactgggtctggaccaggcctgagg
cgaggtgcagccaccatgatcggaaccttgggaccgaggctgggaaactag

>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_3|125_aa
MLSGTADAMDFRDLKSPAGLQVLNNYLADKSYIEGYVPSQADVAVFEAASGPPPADLCYA
LRWYNHIKSYEKEKASLPGVKKALVKYGPVDMEDTIGRGAKDSKDDDDIDLFGADGRRKV
KKRRG

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_3|378_bp
atgctctcaggtacagctgatgccatggatttcagagacctgaaaagccctgccggcctc
caggtgctcaacaattacctggcggacaagagctacatcgaggggtatgtgccatcacaa
gcagatgtggcagtatttgaagcagcatctggcccaccgcctgctgacttgtgttatgcc
cttcgttggtataatcacatcaagtcttacgaaaaagaaaaggccagccttccaggagtg
aagaaggctttggtcaagtatggtcctgtggatatggaagacactataggaagaggagct
aaagatagtaaagatgatgatgacattgatctctttggagctgatgggaggagaaaagtg
aagaaacgaagaggctaa

>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_4|218_aa
MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGR
SSSRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKP
KHCVHFWDHPLKGSTHLSRRAGAFEALRWELCEGNGAV

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_4|657_bp
atggcagcggaaacgcagacactgaactttgggcctgaatggctccgagctctgtccagt
ggtgggagtattacatcccctcctctttctccagcattgccgaagtataaattagcagat
tatcgttacggcagagaagaaatgttagcacttttccttaaagacaacaagataccttca
gaccttctggataaagaatttctgcctatcctccaggaggaaccccttccaccattggct
ctggtaccctttacagaagaagaacagagaaacttttccatgtctgtaaatagtgctgct
gtcctgcgattgacaggacgaggaggaggaggaacagtggtgggggctcctagaggtcga
agttcttcaagagggcgaggcagaggcagaggtgaatgtggtttctaccaaagaagtttt
gatgaagtagagggtgtttttggtcgaggaggtggcagagaaatgcatagatcgcagagc
tgggaggaaaggggtgacagacgttttgaaaaaccaggacgaaaagatgtaggcaagcct
aagcattgtgttcacttctgggaccaccccttgaaagggtccacacatttgagtaggagg
gctggggcatttgaagccttgcgatgggaactgtgtgaaggaaatggagctgtttag

>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_5|360_aa
MDSSNCKVIAPLLSQRYRRMVTKDGHSTLQMDGAQRGLAYLRDAWGILMDMRWRWMMLVF
SASFVVHWLVFAVLWYVLAEMNGDLELDHDAPPENHTICVKYITSFTAAFSFSLETQLTI
GYGTMFPSGDCPSAIALLAIQMLLGLMLEAFITGAFVAKIARPKNRAFSIRFTDTAVVAH
MDGKPNLIFQVANTRPSPLTSVRVSAVLYQERENGKLYQTSVDFHLDGISSDECPFFIFP
LTYYHSITPSSPLATLLQHENPSHFELVVFLSAMQEGTGEICQRRTSYLPSEIMLHHCFA
SLLTRGSKGEYQIKMENFDKTVPEFPTPLVSKSPNRTDLDIHINGQSIDNFQISETGLTE

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_5|1083_bp
atggacagcagtaattgcaaagttattgctcctctcctaagtcaaagataccggaggatg
gtcaccaaggatggccacagcacacttcaaatggatggcgctcaaagaggtcttgcatat
cttcgagatgcttggggaatcctaatggacatgcgctggcgttggatgatgttggtcttt
tctgcttcttttgttgtccactggcttgtctttgcagtgctctggtatgttctggctgag
atgaatggtgatctggaactagatcatgatgccccacctgaaaaccacactatctgtgtc
aagtatatcaccagtttcacagctgcattctccttctccctggagacacaactcacaatt
ggttatggtaccatgttccccagtggtgactgtccaagtgcaatcgccttacttgccata
caaatgctcctaggcctcatgctagaggcttttatcacaggtgcttttgtggcgaagatt
gcccggccaaaaaatcgagctttttcaattcgctttactgacacagcagtagtagctcac
atggatggcaaacctaatcttatcttccaagtggccaacacccgacctagccctctaacc
agtgtccgggtctcagctgtactctatcaggaaagagaaaatggcaaactctaccagacc
agtgtggatttccaccttgatggcatcagttctgacgaatgtccattcttcatctttcca
ctaacgtactatcactccattacaccatcaagtcctctggctactctgctccagcatgaa
aatccttctcactttgaattagttgtattcctttcagcaatgcaggagggcactggagaa
atatgccaaaggaggacatcctacctaccgtctgaaatcatgttacatcactgttttgca
tctctgttgacccgaggttccaaaggtgaatatcaaatcaagatggagaattttgacaag
actgtccctgaatttccaactcctctggtttctaaaagcccaaacaggactgacctggat
atccacatcaatggacaaagcattgacaattttcagatctctgaaacaggactgacagaa
taa

>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_6|1338_aa
MQNGLINQGKPEYSSDIPDTSCSCILLVQLIIGGRGFHRDQQSGIVGRPNFEEGGPTSVG
RKHEFIRSESENWRIFREEQNGEDEDGGWRLAGSRRDGERWRPHSPDGPRSAGWREHMER
RRRFEFDFRDRDDERGYRRVRSGSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKK
VQKEPIPEEQEMDFRPVDEGEECSDSEGSHNEEAKEPDKTNKKEGEKTDRVGVEASEETP
QTSSSSARPGTPSDHQSQEASQFERKDEPKTEQTEKAEEETRMENSLPAKVPSRGDEMVA
DVQQPLSQIPSDTASPLLILPPPVPNPSPTLRPVETPVVGAPGMGSVSTEPDDEEGLKHL
EQQAEKMVAYLQDSALDDERLASKLQEHRAKGVSIPLMHEAMQKWYYKDPQGEIQGKLFL
FPLNTESLAITIARDWRKSVSMNFLSVSMNFTIPSTSCPFNNQEMAEWFQAGYFTMSLLV
KRACDESFQPLGDIMKMWGRVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQ
FLIQQQYAQVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSVPDTG
SIWELQPTASQPTVWEGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAEMRAK
REEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQRE
EEERQQQEEALRRLEERRREEEERRKQEELLRKQPKPNPEQGLKTLFNSVKAERGDEAEE
EKFEAISGWFMKFKERSHFHKIKAQGEAASADVEAAASYPDALLKIIDEGGLPISLLYTC
FSDSVNAIKYLRPLHTPPLPFPGVLTFEFRCFTSWLRVLDITEEEAAKWAREEEEAQRRL
EENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQM
KLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQQQQ
QQQKLSGWGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSI
GNSVWGSINTGPPNQWASDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKNNASL
SKSVGVSNRQNKKVEEEEKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFL
KEVESPYEVHDYIRAYLGDTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQP
PQQPQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSV
NASSERLNMGEIETLDDY

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_6|4017_bp
atgcaaaatggactaataaaccaaggaaagccagaatatagttctgacattccagacacg
tcctgcagctgcattctgttagtccagcttataattgggggtagaggattccacagagat
cagcagtcagggattgttgggagaccaaattttgaggaaggtggaccaacatcagtaggg
agaaagcatgaatttatacgctcagaaagtgaaaattggcgcatctttagagaggaacaa
aatggagaagatgaagatggaggttggcgactagctggatcaaggagggatggagagagg
tggcgacctcacagtcctgatggccctcgttctgcaggctggcgggaacacatggaacga
cgtcggaggtttgagtttgattttcgagatagagatgatgaacggggttaccgaagggtt
cgctctggcagtgggagcatagatgatgacagggatagcttgcccgaatggtgcttagag
gatgctgaagaagaaatgggtacatttgactcatctggagcattcctttctctaaaaaaa
gtacagaaagagcctattccagaagagcaggagatggacttccggcctgtggacgaaggg
gaggagtgctctgactctgagggtagccataatgaagaggccaaagaacccgataagaca
aataagaaagaaggagagaaaacagatagagtaggagttgaagctagtgaggaaactccc
cagacctcatcatcatctgctagaccaggtactccttcagaccatcagtctcaggaagca
tcacagtttgagaggaaagatgaaccaaaaactgagcaaacggaaaaagctgaagaggag
actcggatggaaaatagtctaccagccaaagtgcccagcagaggggatgaaatggttgct
gatgtccagcagcccctgtcgcagattccttcagatacagcctctcctcttctcatactt
ccacctcctgttcccaatcctagtcctactctccggccagttgaaacaccagttgtaggt
gctcctggtatgggcagtgtttccacagaacctgatgatgaagaaggtctcaaacatttg
gagcagcaagctgagaaaatggtggcttatctccaagacagtgcactagatgatgaaaga
ttggcatcaaaactgcaagagcacagagctaaaggagtgtcgattccattgatgcatgaa
gcaatgcagaagtggtattacaaagatcctcagggagaaattcaaggcaagttgttcctt
tttcctttaaatactgaatccctggcaattaccattgccagggactggaggaaatctgtt
tctatgaattttctatctgtttctatgaattttactattccgagcacctcatgtcccttc
aataatcaggagatggcagaatggtttcaggcgggctattttactatgtctttattggtg
aagagagcgtgtgatgaaagcttccaacctcttggcgatatcatgaaaatgtggggaagg
gttcccttttctccaggtccagctccccctcctcatatgggagagctggaccaggaacga
ctgaccaggcagcaagaactcacagccttataccagatgcagcacctgcagtaccagcag
tttttaatacaacaacaatatgcacaggttttggcccaacagcagaaagcagcactgtct
tcccagcagcagcagcagttggcacttcttcttcaacagtttcagaccttgaagatgaga
atatctgatcagaacatcattccctcagtaactaggtctgtgtccgtgccagatactggc
tctatctgggagcttcagccaacagcttcacagcctacagtttgggaaggtggtagtgta
tgggatcttcctctggacaccacgacaccaggccctgccctggaacagcttcagcagcta
gagaaggccaaagctgcaaagctagagcaagagagaagagaggcagaaatgagggcaaaa
cgggaagaggaagagcgaaagaggcaggaagaactccgaagacaacaggaggaaattctt
cggcgacagcaggaagaagaaaggaaaaggcgagaggaagaagaacttgcccgaaggaaa
caggaagaggctctgcgtcgccagcgggagcaagaaattgcattaaggcgacagcgagaa
gaggaagaaagacagcagcaagaagaagctcttagaagactggaagagaggagaagagaa
gaggaagaaaggcggaagcaggaagaattgttacgcaaacagccaaagcctaatccagaa
caaggcctcaaaactctcttcaattctgtgaaagccgagagaggtgatgaagctgaagaa
gaaaagtttgaagctatcagtggttggttcatgaagtttaaggaaagaagccatttccat
aaaataaaagcacaaggtgaagcagctagtgctgatgtagaagctgcagcaagttatcca
gatgccctacttaagatcattgatgaaggaggtctgcccatcagcctgttgtacacttgc
ttcagtgattcagtgaatgccattaagtatttacggcctttgcatactcctcctctgcca
tttcctggtgtgttgacttttgagttcagatgtttcacgtcatggttaagagttttggat
atcacagaagaggaggctgcaaaatgggcccgggaagaagaagaagcccagcgtcgatta
gaggagaaccggctgcggatggaagaggaggcagccagactccggcatgaggaagaagaa
cggaagagaaaggagctggaggtccagcggcagaaggagttaatgcgccagaggcagcag
cagcaagaggctctccggaggttgcagcagcagcagcagcaacaacagctggcgcagatg
aagcttccttcttcttcaacgtggggccagcagtccaatacaacagcatgtcagtcccag
gccacgctgtcgttggctgaaatccaaaaactagaggaagaacgagaacggcagcttcga
gaagagcaaaggcgccagcagagggagttgatgaaagctcttcagcagcagcagcaacag
caacagcagaaactctcaggttgggggaatgtcagcaaaccttcaggtaccacgaaatct
cttctggagatccagcaggaagaggccaggcaaatgcaaaagcagcagcagcagcagcag
caacaccagcaaccaaacagagctcgtaacaatacgcattccaacctgcacaccagcatt
gggaattctgtttggggctctataaatactggtcctcctaaccagtgggcatctgaccta
gtcagtagtatttggagtaatgctgacactaaaaactccaacatgggattctgggatgat
gcagtgaaagaggtgggacctaggaattcaacaaataaaaataaaaacaacgccagtctc
agtaaatctgtaggtgtgtctaaccggcagaataagaaagtagaagaagaagaaaagttg
ctgaagctctttcagggagtaaataaagcccaagatggatttacgcagtggtgtgaacag
atgcttcatgcccttaatacggcaaataacttggatgttcccacatttgtttctttcctg
aaagaagtagaatctccttatgaggtccatgattatatcagggcctatttaggagatact
tctgaggccaaggagtttgccaagcagttccttgagcgccgtgccaaacagaaagccaac
cagcagcgtcagcagcagcagctgccacagcagcagcagcagcagccgccacagcagccg
ccacagcagccacaacagcaggactctgtgtgggggatgaaccacagtacactccattca
gtatttcagaccaatcaaagcaacaaccaacaatccaattttgaggctgtgcagagtggc
aagaagaagaaaaagcagaagatggtccgagcagatcccagtttattaggattttcagtc
aatgcatcatcggagcgactcaacatgggtgaaatcgagacgttggatgactactga

>gi568815596r:232668194_232871362|GENSCAN_predicted_peptide_7|25_aa
MASCLALRMALLLVSGVLAPAVLTX

>gi568815596r:232668194_232871362|GENSCAN_predicted_CDS_7|75_bp
atggcatcctgtctggccctgcgcatggcgctgctgctggtctccggggttctggcccct
gcggtgctcacagnn