GENSCAN 1.0	Date run:  8-Nov-116	Time: 06:00:48

Sequence gi568815588f:69080292_69309032 : 228741 bp : 43.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7870   7945   76  0  1   80  116   130 0.801  14.25
 1.02 Intr +  16793  16940  148  0  1   53   94    60 0.302   2.39
 1.03 Intr +  23580  23753  174  0  0   72  -12   162 0.024   3.65
 1.04 Intr +  30436  30580  145  1  1   -3   74   114 0.013   1.18
 1.05 Intr +  32150  32257  108  1  0   75   32    90 0.415   2.58
 1.06 Intr +  34373  34502  130  1  1   74   39    84 0.593   2.37
 1.07 Intr +  34541  34678  138  0  0  -18   18   220 0.474   4.84
 1.08 Term +  35063  35268  206  0  2   31   39   169 0.555   3.83
 1.09 PlyA +  35391  35396    6                               1.05

 2.00 Prom +  45702  45741   40                              -1.96
 2.01 Init +  52679  52756   78  1  0   69   94    71 0.297   6.86
 2.02 Intr +  75521  75596   76  1  1   73   97     5 0.317  -1.01
 2.03 Intr +  76716  76872  157  1  1   54   64   177 0.996  10.97
 2.04 Intr +  77756  77920  165  2  0  117  106   105 0.893  14.28
 2.05 Intr +  82115  82221  107  2  2   84  111    16 0.544   3.36
 2.06 Intr +  85751  85819   69  0  0   55   87    84 0.528   4.15
 2.07 Intr +  88198  88340  143  2  2   78   80    34 0.195   1.67
 2.08 Term +  90865  90978  114  0  0   86   43    22 0.166  -3.93
 2.09 PlyA +  91411  91416    6                               1.05

 3.00 Prom +  97308  97347   40                              -3.96
 3.01 Init + 100001 100271  271  1  1   57   70   218 0.221  12.03
 3.02 Intr + 105696 105773   78  1  0   77   91    75 0.261   6.22
 3.03 Intr + 118813 118906   94  2  1   90   78    78 0.954   6.02
 3.04 Intr + 119989 120208  220  1  1   76   90    40 0.723   1.30
 3.05 Intr + 122148 122228   81  2  0   61   87    63 0.906   3.33
 3.06 Intr + 122576 122752  177  1  0   84  115    24 0.855   4.82
 3.07 Intr + 127502 127650  149  1  2  109   76   119 0.997  11.83
 3.08 Term + 128309 128744  436  2  1   87   29   242 0.999  12.96
 3.09 PlyA + 128784 128789    6                               1.05

 4.00 Prom + 136946 136985   40                              -6.66
 4.01 Init + 140145 140207   63  2  0   52  116   113 0.934  11.65
 4.02 Intr + 146916 147078  163  2  1   99  117   222 0.994  25.75
 4.03 Intr + 152473 152621  149  2  2   60   67   208 0.969  15.85
 4.04 Intr + 152723 152842  120  1  0  105   94     3 0.812   3.29
 4.05 Intr + 158751 158846   96  2  0   52  100    25 0.263   0.31
 4.06 Intr + 160361 160460  100  1  1   98   18   274 0.817  21.08
 4.07 Intr + 162891 163074  184  1  1   80   74   301 0.856  26.75
 4.08 Intr + 165788 165943  156  2  0   57   74   158 0.976  10.43
 4.09 Intr + 167069 167302  234  2  0   67   70   344 0.983  27.30
 4.10 Intr + 168133 168437  305  1  2   78   80   567 0.990  51.13
 4.11 Intr + 169999 170144  146  2  2   88  107   235 0.913  25.40
 4.12 Intr + 170242 170361  120  0  0  108  116   107 0.997  16.19
 4.13 Intr + 176745 176840   96  2  0  115   24    98 0.987   6.31
 4.14 Intr + 177036 177135  100  2  1  111   96   152 0.999  17.98
 4.15 Intr + 178485 178668  184  1  1   61   57   251 0.966  18.15
 4.16 Intr + 178772 178836   65  2  2   44  103    84 0.976   3.86
 4.17 Intr + 180814 181003  190  2  1  109   55   286 0.890  26.04
 4.18 Intr + 185294 185527  234  2  0   98   70   239 0.895  19.90
 4.19 Intr + 186319 186438  120  1  0   98   16   107 0.020   4.11
 4.20 Intr + 198109 198232  124  1  1  101   71    31 0.052   3.29
 4.21 Intr + 208380 208479  100  2  1  100  111    46 0.447   7.78
 4.22 Term + 215026 215132  107  2  2   83   42    52 0.072  -1.33
 4.23 PlyA + 216170 216175    6                               1.05

 5.02 PlyA - 217264 217259    6                               1.05
 5.01 Term - 220525 220218  308  2  2   70   48   201 0.675   9.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  23580  23829  250  0  1   72   42   170 0.959   5.98
S.002 Init +  30515  30580   66  1  0   63   74    67 0.810   3.87
S.003 Term + 186319 186466  148  1  1   98   49   141 0.877   8.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:69080292_69309032|GENSCAN_predicted_peptide_1|374_aa
MQKLLKCSRLVLALALILVLESSVQGYPTRRARYQWVRCNPDSNSANCLEEKGPMFELLP
GESNKIPRLRTDLFPKTRIQDLNRIFPLSEDYSGSGFGSGSGSGSGSGSGFLTEMEQDYQ
LVDESDAFHDNLRKIGRLGTKQLRVKACGWTNERRQSVKMYVSNVNAHQKTSITEEALNN
QERLADGCKFLDAESQFIQGHAPFSWTAHSQRLIYVGTTEIMLRQKQIQAIFLFEFKTGL
KAAETTRNINNPFGAGIANKHESLEDEKRSGRPWEFDNDQLRAIIEADPLTTTQEVAEKL
NIDHSTAGIGPQKGPVLLHKNAQVQVVEPMLQKLNELGYEVLPHPPYLPDFLPTDYHSFK
HLGNFLQGKRFHNQ

>gi568815588f:69080292_69309032|GENSCAN_predicted_CDS_1|1125_bp
atgcagaagctactcaaatgcagtcggcttgtcctggctcttgccctcatcctggttctg
gaatcctcagttcaaggttatcctacgcggagagccaggtaccaatgggtgcgctgcaat
ccagacagtaattctgcaaactgccttgaagaaaaaggaccaatgttcgaactacttcca
ggtgaatccaacaagatcccccgtctgaggactgacctttttccaaagacgagaatccag
gacttgaatcgtatcttcccactttctgaggactactctggatcaggcttcggctccggc
tccggctctggatcaggatctgggagtggcttcctaacggaaatggaacaggattaccaa
ctagtagacgaaagtgatgctttccatgacaaccttagaaagattggaagattgggcacg
aagcagctcagggtaaaggcatgtggatggaccaatgagagaagacaaagtgtgaagatg
tacgtatcaaatgtgaatgcccaccagaaaacatccatcacagaagaggcactaaacaac
caggaaaggttggctgacggctgcaagttcttagatgcagagagccagttcatccaaggt
catgctcccttctcatggacagctcacagtcaaagactcatctatgtggggactacggaa
ataatgttaagacaaaagcaaattcaagctattttcttattcgagttcaaaacaggtctt
aaagcagcagagacaactcgcaacatcaacaacccatttggcgcaggaattgctaacaaa
catgagagccttgaagatgagaagcgtagtggccggccatgggaatttgacaatgaccaa
ttgagagcaatcattgaagctgatcctcttacaactacacaagaagttgctgaaaaactc
aacatcgaccattctacagccggcataggtccacagaaaggcccagttctgctccataag
aacgcccaagtgcaggtcgtagaaccaatgcttcaaaagttgaatgaattgggctacgaa
gttttgcctcatccgccatatttacctgacttcttgccaactgactaccactccttcaag
catctcggcaactttttgcagggaaaacgcttccacaaccagtag

>gi568815588f:69080292_69309032|GENSCAN_predicted_peptide_2|302_aa
MAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFNDKSNT
HEFVNLVKELALPGELTQSRSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLTDLVK
EYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQ
HMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVN
KKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPEKLRKQRTNFHQRFESPESQASAEQP
EM

>gi568815588f:69080292_69309032|GENSCAN_predicted_CDS_2|909_bp
atggcagaaatgaaaactgaagatggcaaagtagaaaaacactatctcttctatgacgga
gaatccgtttcaggaaaggtaaacctagcctttaagcaacctggaaagaggctagaacac
caaggaattagaattgaatttgtaggtcaaattgaacttttcaatgacaagagtaatact
catgaatttgtaaacctagtgaaagaactagccttacctggagaactgactcagagcaga
agttatgattttgaatttatgcaagttgaaaagccatatgaatcttacatcggtgccaat
gtccgcttgaggtattttcttaaagtgacaatagtgagaagactgacagatttggtaaaa
gagtatgatcttattgttcaccagcttgccacctatcctgatgttaacaactctattaag
atggaagtgggcattgaagattgtctacatatagaatttgaatataataaatcaaagtat
catttaaaggatgtgattgttggaaaaatttacttcttattagtaagaataaaaatacaa
catatggagttacagctgatcaaaaaagagatcacaggaattggacccagtaccacaaca
gaaacagaaacaatcgccaaatatgaaataatggatggtgcaccagtaaaaggtgaatca
attccaataaggctatttttagcaggatatgacccaactccaacaatgagagatgtgaac
aaaaaattttcagtaaggtactttttgaatttagtgcttgttgatgaggaagaccggagg
tacttcaaacagcaggagataattttatggagaaaagctcctgaaaaactgaggaaacag
agaacaaactttcaccagcgatttgaatctccagaatcacaggcatctgccgaacagcct
gaaatgtga

>gi568815588f:69080292_69309032|GENSCAN_predicted_peptide_3|501_aa
MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSVLATASSSASGGSKIPN
TSLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYKRKEIQKLGADYGLDGTKL
AQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQAL
QIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLP
DATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPF
VCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRF
MDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKS
QARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKE
KTESGTHPKGTRRKKKEPDSD

>gi568815588f:69080292_69309032|GENSCAN_predicted_CDS_3|1506_bp
atgtccttctcccgtgccctattgtgggctcggctcccggcggggcgccaggctggccac
cgggcagccatctgctctgcccttcgtccccactttgggccctttcccggggttctgggg
caagtttctgtccttgccaccgcctcctcctctgcctccggtggctccaaaataccaaac
acgtccttgttcgtgcccctgactgtgaaacctcagggccccagcgccgacggcgacgtc
ggggccgagctaacccggcctctggacaagaatgaagtaaagaaggtcttagacaaattt
tacaagaggaaagaaattcagaaactgggtgctgattatggacttgatgggaccaaactt
gctcaagcaaaaaagtttaatgatcccaatgacccatgcaaaatcttggttgctacagat
gcaattggcatgggacttaatttgagcataaggagaattattttttactcccttataaag
cccagtatcaatgaaaagggagagagagaactagaaccaatcacaacctctcaagccctg
cagattgctggcagagctggcagattcagctcacggtttaaagaaggagaggttacaaca
atgaatcatgaagatctcagtttattaaaggaaattttgaagaggcctgtggatcctata
agggcagctggtcttcatccaactgctgagcagattgaaatgtttgcctaccatctccct
gatgcaacactgtccaatctcattgatatttttgtagacttttcacaagttgatgggcag
tattttgtctgcaatatggatgattttaaattttctgcagagttgatccagcatattcca
ctaagtctgcgagtgaggtatgttttctgcacagctcctatcaacaagaagcagcctttt
gtgtgttcttcactgttacagtttgccaggcagtatagcaggaatgagcccctgaccttt
gcatggttacgccgatacatcaaatggcctttacttccacctaagaatattaaagacctc
atggatcttgaagctgtccacgatgtcttggatctttacttgtggctaagctaccgattt
atggatatgtttccagatgccagccttattcgagatctccagaaagaactagatggtatt
atccaagatggtgtgcacaatatcactaaattgattaaaatgtctgagacgcataagctg
ttgaatttggagggctttccatcagggagccagtcacgattgtcaggaaccttaaagagc
caagctagaaggacacgcggcaccaaagctctagggagtaaagctactgagccacccagc
cccgatgcaggagagctgtcccttgcttccagattggtgcagcaaggactcctcactcca
gacatgctgaaacagctagaaaaagagtggatgacacaacaaactgaacacaacaaagaa
aaaacagagtctgggactcatccaaaagggacgagaagaaagaagaaggaacctgattcg
gactag

>gi568815588f:69080292_69309032|GENSCAN_predicted_peptide_4|1051_aa
MFAVHLMAFYFSKLKEDQIKKVDRFLYHMRLSDDTLLDIMRRFRAEMEKGLAKDTNPTAA
VKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKVQVAEEGKRHVQMESQFYPTPNEIIR
GNGTELFEYVADCLADFMKTKDLKHKKLPLGLTFSFPCRQTKLEEGVLLSWTKKFKARGV
QDTDVVSRLTKAMRRHKDMDVDILALVNDTVGTMMTCAYDDPYCEVGVIIGTGTNACYME
DMSNIDLVEGDEGRMCINTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGL
YLGELVRLILLKMAKAGLLFGGEKSSALHTKGKIETRHVAAMEKYKEGLANTREILVDLG
LEPSEADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKVERLRTTVGMDGTLYKIH
PQYPKRLHKVVRKLVPSCDVRFLLSESGSTKGAAMVTAVASRVQAQRKQIDRVLALFQLT
REQLVDVQAKMRAELEYGLKKKSHGLATVRMLPTYVCGLPDGTEKGKFLALDLGGTNFRV
LLVKIRSGRRSVRMYNKIFAIPLEIMQGTGEELFDHIVQCIADFLDYMGLKGASLPLGFT
FSFPCRQMSIDKGTLIGWTKGFKATDCEGEDVVDMLREAIKRRNEFDLDIVAVVNDTVGT
MMTCGYEDPNCEIGLIAGTGSNMCYMEDMRNIEMVEGGEGKMCINTEWGGFGDNGCIDDI
WTRYDTEVDEGSLNPGKQSCRMSVKYPIGTKEKYDDKFATGLPQPYPSSPNRYEKMTSGM
YLGEIVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLG
LDSTCEDSIVVKEVCGAVSRRAAQLCGAGLAAIVEKRREDQGLEHLRITVGVDGTLYKLH
PHFSRILQETVKELAPRCDVTFMLSEDGSGKGAALITAVAKSCYMESTMDQIGNPSLLSK
AAKAMWSGSGPQIPVLISESAFQAFKTQLLRVEKQKKGPEVSKCPPHNGADLPARIVDCG
LLEGRTTVVFHLGLSSFQHSAWYICKNLVFV

>gi568815588f:69080292_69309032|GENSCAN_predicted_CDS_4|3156_bp
atgtttgcggtccacttgatggcattttacttcagcaagctgaaggaggaccagatcaag
aaggtggacaggttcctgtatcacatgcggctctccgatgacacccttttggacatcatg
aggcggttccgggctgagatggagaagggcctggcaaaggacaccaaccccacggctgca
gtgaagatgttgcccaccttcgtcagggccattcccgatggttccgaaaatggggagttc
ctttccctggatctcggagggtccaagttccgagtgctgaaggtgcaagtcgctgaagag
gggaagcgacacgtgcagatggagagtcagttctacccaacgcccaatgaaatcatccgc
gggaacggcacagagctgtttgaatatgtagctgactgtctggcagatttcatgaagacc
aaagatttaaagcataagaaattgccccttggcctaactttttctttcccctgtcgacag
actaaactggaagagggtgtcctactttcgtggacaaaaaagtttaaggcacgaggagtt
caggacacggatgtggtgagccgtctgaccaaagccatgagaagacacaaggacatggac
gtggacatcctggccctggtcaatgacaccgtggggaccatgatgacctgtgcctatgac
gacccctactgcgaagttggtgtcatcatcggaactggcaccaatgcgtgttacatggag
gacatgagcaacattgacctggtggagggcgacgagggcaggatgtgcatcaacacagag
tggggggccttcggggacgacggggccctggaggacattcgcactgagttcgacagggag
ctggacctcggctctctcaacccaggaaagcaactgttcgagaagatgatcagtggcctg
tacctgggggagcttgtcaggcttatcttgctgaagatggccaaggctggcctcctgttt
ggtggtgagaaatcttctgctctccacactaagggcaagatcgaaacacggcacgtggct
gccatggagaagtataaagaaggccttgctaatacaagagagatcctggtggacctgggt
ctggaaccgtctgaggctgactgcattgccgtccagcatgtctgtaccatcgtctccttc
cgctcggccaatctctgtgcagcagctctggcggccatcctgacacgcctccgggagaac
aagaaggtggaacggctccggaccacagtgggcatggacggcaccctctacaagatacac
cctcagtacccaaaacgcctgcacaaggtggtgaggaaactggtcccaagctgtgatgtc
cgcttcctcctgtcagagagtggcagcaccaagggggccgccatggtgaccgcggtggcc
tcccgcgtgcaggcccagcggaagcagatcgacagggtgctggctttgttccagctgacc
cgagagcagctcgtggacgtgcaggccaagatgcgggctgagctggagtatgggctgaag
aagaagagccacgggctggccacggtcaggatgctgcccacctacgtctgcgggctgccg
gacggcacagagaaaggaaagtttctcgccctggatcttgggggaaccaacttccgggtc
ctcctggtgaagatcagaagtggacggaggtcagtgcgaatgtacaacaagatcttcgcc
atccccctggagatcatgcagggcactggtgaggagctctttgatcacattgtgcagtgc
atcgccgacttcctggactacatgggcctcaagggagcctccctacctttgggcttcaca
ttctcatttccctgcaggcagatgagcattgacaagggaacactcatagggtggaccaaa
ggtttcaaggccactgactgtgaaggggaggacgtggtggacatgctcagggaagccatc
aagaggagaaacgagtttgacctggacattgttgcagtcgtgaatgatacagtggggacc
atgatgacctgtggctatgaagatcctaattgtgagattggcctgattgcaggaacaggc
agcaacatgtgctacatggaggacatgaggaacatcgagatggtggaggggggtgaaggg
aagatgtgcatcaatacagagtggggaggatttggagacaatggctgcatagatgacatc
tggacccgatacgacacggaggtggatgaggggtccttgaatcctggcaagcagagctgt
cgaatgtcagtgaaatatcctattggaacaaaagaaaaatatgatgacaagtttgcaaca
ggtctgccccaaccttatccttcttctccaaacagatacgagaaaatgaccagtgggatg
tacttgggggagattgtgcggcagatcctgatcgacctgaccaagcagggtctcctcttc
cgagggcagatttcagagcgtctccggaccaggggcatcttcgaaaccaagttcctgtcc
cagatcgaaagcgatcggctggcccttctccaggtcaggaggattctgcagcagctgggc
ctggacagcacgtgtgaggacagcatcgtggtgaaggaggtgtgcggagccgtgtcccgg
cgggcggcccagctctgcggtgctggcctggccgctatagtggaaaaaaggagagaagac
caggggctagagcacctgaggatcactgtgggtgtggacggcaccctgtacaagctgcac
cctcacttttctagaatattgcaggaaactgtgaaggaactagcccctcgatgtgatgtg
acattcatgctgtcagaagatggcagtggaaaaggggcagcactgatcactgctgtggcc
aagagctgctacatggaaagtactatggatcaaattggaaatccatctctcctctcaaag
gcagctaaagctatgtggtcaggctctgggccccagattccagtcctgatttctgagtct
gctttccaggcgttcaagacccagctgttgagagtagaaaagcagaagaaaggacccgag
gtcagcaagtgccctccccacaatggggcagatctgccagcgagaatcgtggattgtggg
ctccttgagggccgaaccacggttgtctttcatcttggactctccagcttccaacacagt
gcctggtacatttgtaagaacctagtgtttgtgtga

>gi568815588f:69080292_69309032|GENSCAN_predicted_peptide_5|102_aa
XVHINVLADALKSINNAEKRDKHQVLRPCSKVIVWFLTVMMKHGYIGEFEIMDDHRARQI
VVNLTGSLNKCGMISPRFDVQLKDLEKCRIICFHLASLISLY

>gi568815588f:69080292_69309032|GENSCAN_predicted_CDS_5|309_bp
ntggtgcacattaatgtcctggctgatgctctcaagagcatcaacaatgctgaaaagaga
gacaaacaccaggttcttaggccatgctccaaagtcatcgtctggtttctcactgtgatg
atgaagcatggttatattggcgaatttgaaatcatggatgatcacagagctaggcaaatt
gttgtgaacctcacaggcagtctaaacaagtgtggcatgatcagccccagatttgatgtg
caactcaaagatctagagaaatgcagaataatctgcttccatctggccagtttgatttca
ttgtactga