GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:55:36

Sequence gi568815596f:182978934_183195655 : 216722 bp : 38.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -   2443   2311  133  0  1   -6   98   133 0.543   4.63
 1.08 Intr -   3994   3888  107  1  2   73   97   100 0.508   7.49
 1.07 Intr -   4449   4353   97  2  1   75   86    39 0.204   1.49
 1.06 Intr -  23336  23194  143  2  2   81   71    55 0.334   1.33
 1.05 Intr -  24392  24300   93  2  0   86   95    81 0.402   7.84
 1.04 Intr -  44983  44873  111  1  0   86  101   114 0.993  12.16
 1.03 Intr -  59145  59059   87  0  0    2   91   144 0.022   5.35
 1.02 Intr -  59685  59424  262  2  1   24   23   239 0.006   7.57
 1.01 Init -  67468  67341  128  1  2   54  115   120 0.499  10.98
 1.00 Prom -  71529  71490   40                              -4.65

 2.10 PlyA -  72176  72171    6                               1.05
 2.09 Term -  73644  72767  878  1  2   80   28   451 0.067  30.05
 2.08 Intr -  74333  74176  158  1  2   10   87   109 0.011   1.73
 2.07 Intr -  81734  81530  205  0  1   68  105    74 0.152   4.44
 2.06 Intr -  82131  82048   84  1  0  142   78    64 0.744   9.67
 2.05 Intr -  90516  90443   74  2  2   74   39    64 0.026  -1.77
 2.04 Intr -  92433  92111  323  0  2  -29    5   390 0.104  12.73
 2.03 Intr -  92614  92458  157  0  1  -33   -2   265 0.429   4.49
 2.02 Intr -  93131  92734  398  2  2  -13   19   589 0.337  34.35
 2.01 Init -  93553  93230  324  1  0   86   87   290 0.679  26.08
 2.00 Prom -  93972  93933   40                              -9.25

 3.00 Prom +  94031  94070   40                              -7.85
 3.01 Init +  96972  97092  121  2  1   88   34   100 0.608   5.00
 3.02 Intr +  99987 100226  240  1  0   70   95   195 0.612  15.00
 3.03 Intr + 104575 104621   47  2  2   67   93    62 0.960   1.81
 3.04 Intr + 108107 108259  153  1  0  106   87    70 0.947   8.05
 3.05 Term + 116498 116725  228  1  0  105   44   109 0.956   3.85
 3.06 PlyA + 120673 120678    6                               1.05

 4.00 Prom + 126040 126079   40                              -4.35
 4.01 Init + 129838 129886   49  0  1   86   58    28 0.004  -1.24
 4.02 Intr + 139658 139809  152  0  2   69   76    82 0.022   4.06
 4.03 Intr + 145248 145494  247  2  1   28   79   148 0.026   4.01
 4.04 Intr + 149354 149524  171  0  0   51   96    68 0.049   2.89
 4.05 Intr + 151485 151612  128  1  2   90   90    60 0.261   5.88
 4.06 Intr + 154633 154690   58  0  1   73  111    33 0.118   1.64
 4.07 Intr + 172575 172716  142  1  1   34   82    95 0.056   1.99
 4.08 Intr + 174729 174987  259  0  1   77   68   150 0.134   8.44
 4.09 Intr + 179350 179478  129  0  0   52  106   112 0.748   9.37
 4.10 Intr + 180555 180719  165  2  0   49   68    79 0.520   1.24
 4.11 Intr + 193028 193115   88  1  1   93   84    77 0.034   6.42
 4.12 Term + 193439 193464   26  0  2  106   47    26 0.021  -2.29
 4.13 PlyA + 194161 194166    6                               1.05

 5.03 PlyA - 194522 194517    6                               1.05
 5.02 Term - 199916 199751  166  1  1   50   43   136 0.679   1.71
 5.01 Intr - 200402 200255  148  0  1   57   66   122 0.842   5.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  50521  50519    3  1  0   85  115     0 0.860   2.45
S.002 Term -  92433  92107  327  0  0  -29   47   402 0.807  18.12
S.003 Sngl + 126096 126623  528  2  0   55   48   163 0.935   4.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:182978934_183195655|GENSCAN_predicted_peptide_1|387_aa
MVQEASEAIGQHQSSDAKLIRSGKESLREPWARVPGGLGVAARRSGRSGPGPGPERRRRG
HAEGPSAAVPRPASRGRRRCRSGDRGPVRGCGKRPRSQPPETPPPPPPPPHLVEQPGKAA
RWGLGRRAPGPSQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAV
KFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKTVNFDLTKNYLDL
IITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASGSMHRERRKFLRSALKELATVLSDQ
PGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEELRAHVR
KYGPVMQRYYVQYLSGFDAVVLNELVQ

>gi568815596f:182978934_183195655|GENSCAN_predicted_CDS_1|1161_bp
atggtccaggaagcttctgaggcaattgggcagcatcagtcttcagacgctaagctgata
agatctgggaaggagtcactcagagagccttgggccagagttccagggggtctgggagtg
gctgccaggcgtagtgggcggtccgggccagggccagggccagagcggcggcggcgaggc
catgccgagggcccgtcggccgcagttccccgtccggcctcgcgggggcgccggcgctgc
cgatcaggtgaccgagggcccgtccggggctgcgggaagcggcctcgttctcagccgccg
gagacgccgccgccgccgccgccgccgccacacctagtggagcagccggggaaggcggct
cgttgggggctggggcggagagcgccggggcccagtcagcagaagctggcggagaagctc
accatcctcaacgaccggggcgtcggcatgctcacccgcctctacaacatcaagaaggca
tgtggagaccccaaggcaaaaccatcctatcttatcgacaaaaacctggaatctgctgtg
aaattcatagtcagaaaattccctgctgtagaaacccgcaacaacaatcaacagcttgca
caactacagaaagaaaaatcagagattctgaaaaatctggcattatattacttcacattt
gtagatgttatggaatttaagactgtaaactttgatttaacaaagaactacttagattta
attataacctatacaacactaatgatactgctgtctcgaattgaagaaaggaaggcaatc
attggattatacaactatgcccatgaaatgactcatggagcaagtggttcaatgcacaga
gaaagacgcaagtttttaagatctgcactgaaggaattggctactgtcctctctgatcaa
cctggattgctaggtcccaaggcactttttgtttttatggcattatcctttgcccgtgat
gaaatcatctggctacttcgtcatgcagataacatgccaaagaagagtgcagacgacttt
atagataagcacattgctgaattaatattttacatggaagaacttagagcacatgtgagg
aaatacggacctgtaatgcagaggtattacgtgcagtacctttctggctttgatgctgtt
gtcctcaatgaactcgtgcag

>gi568815596f:182978934_183195655|GENSCAN_predicted_peptide_2|866_aa
MSIRTTQKSYRVSTSGPRAFSSHFYTSGPGASISSSSFSQVGSSSFRGGLGGGYGGASGM
GGITTVTVNQSLLSPLNLEVDPHIQAVHTQKKEQIKTLNTKFATFIYKSYINNLRQQLET
LGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYLNKVELESR
LEGLTDEINFLRQLYEEDIPELQSQISDTSVVLPMDNSHSLDMDSIINEVKRSTRSPTAA
SWLQAEIEGLKGQRASLEAAIADAEQRGELAVKDASAKLSELEAALQQTKQDVELMNDKL
ALDIEIATYRQLLEGEESWLESGMQSMSIHTKTISSYAGGLSSAYGGLTSPGLSCGLGSS
FGSGAGSSSFSCISYTRAVVVKKIETRDGTLVSEFSDVLPKQVVPLNLQPLAEMRPRVGS
SYSQTGKENVMPVRVRDHLSRLSVSNKAVYSLGWHRELLTAHSGQTKTIAVILFPTPDPT
RPTPKQTNSSYTFLLNTRLPTDLIRANKGKGGSGAFASTFWTWSRQAAPIRGGSNPGRRI
TRATVGERGTKLEDTRVLLKQSPWSVRRGARRHQASSATVDLCCTKPVSLLPGEPPQKVP
TGVCGPLPAGMIGLLLGTSSLNLKGVQIQTGVNDSDYNGEIQIVISTSVPWKAEPGERIA
QLLIVPYVEIGKNEIKLTGGFGSTNKQGKAAYWVNQITDERPTCEITIQGKKFKVLVDTG
ADISVISLQHWSSTWPIQPAQFNIVGVGKAPEVYQSSYILQCEGPDGRPGTIQPIITSVP
INLWGRDLLQEWGAQVLIPEQLSDGEIPGEIRGPPSCSHVKADTKEDPNCHEQHPSNTAT
HLGTDEETVTDGRRKPEESRTTSHNE

>gi568815596f:182978934_183195655|GENSCAN_predicted_CDS_2|2601_bp
atgtccatcaggacgacccagaagtcctacagggtgtccacttctggcccccgggccttc
agcagccatttctacacaagtgggcctggtgcctccatcagctcctcgagcttctcccaa
gtgggcagcagcagcttccggggtggcctgggaggaggctacggtggggccagtggcatg
ggaggcatcaccaccgtcactgtcaaccagagcctgctgagcccccttaacctggaggtg
gacccacacatccaggcagtgcacactcagaagaaggagcagatcaagaccctcaacact
aagtttgccaccttcatatacaagagttacatcaacaaccttaggcagcagctggagact
ctgggccaggaaaagctgaagctggaggcggagcttggcaacatgcaggggctggtggag
gacttcaagaacaagtatgaggatgagatcaataagcgtacagagatggagaatgaattt
gtcctcatcaagaaggatgtggatgaagcttacctgaacaaggtagagctggagtctcgc
ctggaagggctgactgacgaaatcaacttcctcaggcagctgtatgaagaggatatcccg
gagctgcagtcccagatctcagacacgtctgtggtgctgcccatggacaacagccactcc
ctggacatggacagcatcatcaatgaggtcaagcgcagtacgagatcaccaaccgcagcc
agctggctccaggcagagattgagggtctcaaaggccagagggcttccctggaggccgcc
atcgcagatgcggagcagcgcggggagttggccgttaaggatgccagcgccaagctgtct
gagctggaggccgccctgcagcaaaccaagcaggacgtggagctgatgaacgacaagctg
gccctggacattgagatcgccacctacaggcagctgctggagggcgaggagagctggctg
gagtctgggatgcagagcatgagtatccatacaaagaccatcagcagctatgcaggtggt
ctgagctcggcctatgggggcctcacaagccccggcctcagctgtggactgggctccagc
tttggctctggcgcgggctccagttccttcagctgcatcagctacaccagggccgtggtt
gtgaagaagattgagacccgtgatgggacgctggtgtcagagttctctgacgtcctgccc
aagcaggttgtcccattgaatctgcagcccttagcagagatgagacccagagtgggtagc
tcctactcgcagacagggaaggagaatgttatgcctgtccgtgtaagagaccacctgagc
aggcttagtgtgagcaacaaggctgtttattcacttgggtggcatagggaacttcttaca
gcacattctggccagaccaagactatcgctgttattcttttcccaaccccagaccccacc
agacccacccctaaacagactaactcctcttacaccttcctcctcaatacaaggctgcct
actgacctaatccgtgctaacaaagggaaaggggggtctggagcatttgcatctaccttt
tggacctggtctcggcaagcagcgcccatacgtgggggctcgaatccaggtcgaaggatc
accagagcgacagttggagaacgtggaactaagctggaggacacccgagtactcttaaag
cagtccccatggtcagtaagaaggggagctcggaggcatcaagccagtagtgccacagta
gatttatgctgcacaaaacctgtgagccttctgcctggggaacccccacaaaaggtccca
acaggagtctgtggacccttgccagcggggatgataggattacttctaggaacgtctagt
ttaaatttaaaaggggtacaaatacaaacaggagtcaatgattcagattacaatggggaa
attcaaattgttatatctacttctgttccctggaaagcagagccaggagaacgtatagca
cagctcctgattgtgccatatgtggaaatagggaaaaatgaaattaaactaacaggaggg
tttggaagcacaaataaacaaggcaaagcagcttattgggtaaatcaaattactgatgaa
cgtcctacctgtgaaataactattcagggaaagaaatttaaagttttggtagatacagga
gcagacatttcagtcatttctctacagcactggtcatccacgtggcccattcaacctgct
caatttaacatagttggagttggtaaagcccctgaagtatatcaaagtagttatattttg
caatgtgaaggacctgatggacgacctgggactattcaaccaattataacttctgtacct
ataaatttatgggggagagatttattacaagaatggggagcacaagttctaattccagag
caattatccgatggagagattccgggagaaatccgaggaccccccagttgcagccatgta
aaggctgacactaaggaggaccccaactgtcatgagcaacacccgtcgaacacagccacc
cacctggggacagatgaagaaactgtcacagatggcagaagaaaacctgaggaaagcagg
acaaccagtcacaatgagtaa

>gi568815596f:182978934_183195655|GENSCAN_predicted_peptide_3|262_aa
MDVVYSIRDTTSAKQPSAAAAVPEGIVTSQPIVHPVVETIATAHVMYSLNQEIKAFSRNN
LRKQCTRVTTLTGKKIIETWKDARIHVVEEVEPSSGGGCGYVQDLSSDLQVGVIKPWLLL
GSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEF
IEEAKRKDGVVLVHCNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFME
QLRTYQEGKESNKCDRIQENSS

>gi568815596f:182978934_183195655|GENSCAN_predicted_CDS_3|789_bp
atggatgtggtctattccataagggacacaacctcggcaaagcagccctctgcagctgca
gcagtccctgaagggattgttaccagtcagccaatagtacacccggtagtggagacaata
gccactgctcatgtaatgtactcccttaaccaggaaattaaagcattctcccggaataat
ctcaggaagcaatgcaccagggtgacaacgctaactggaaagaaaattatagaaacatgg
aaagatgccagaattcatgttgtggaagaagtagagccgagcagtgggggtggttgtggt
tatgtgcaggaccttagctcggacctgcaagttggcgttattaagccatggttgctccta
gggtcacaagatgctgctcatgatttggatacactgaaaaagaataaggtgactcatatt
cttaatgttgcatatggagttgaaaatgctttcctcagtgactttacatataagagcatt
tctatattggatctgcctgaaaccaacatcctgtcttattttccagaatgttttgaattt
attgaagaagcaaaaagaaaagatggagtggttcttgttcattgtaatgcaggcgtttcc
agggctgctgcaattgtaataggtttcctgatgaattctgaacaaacctcatttaccagt
gctttttctttggtgaaaaatgcaagaccttccatatgtccaaattctggcttcatggag
cagcttcgtacatatcaagagggcaaagaaagcaataagtgtgacagaatacaggagaac
agttcatga

>gi568815596f:182978934_183195655|GENSCAN_predicted_peptide_4|537_aa
MGFHHVGQAGLELLTSVVGIQITQHQNMLSAANPYGSATTILVSSGENLTKGHKAEETKT
SFRAGVKYPQIRKHSRMKSIHRTIRWFATFPVQKPFPRKFSAQRLCPIPKWLRRLQLKHS
AGPEVTQPHKVARRYPWGAFPPFLKINWEGSEPMMLGSPTSPKPGVNAQFLPGFLMGDLP
APVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLG
STPLTSRRQPNISVMQSPLVGVTSTPGTGQSMFSPASIGQPRKTTLSPAQLDPFYTQGDS
LTSEDHLDDSWVTVFGVQPPSWLFSRAGIACMGFPGTECKLSVDLPFWGLEDGGPLLTAP
LGSALVGTLCGSFDPTVPFRTALAEVLHEGPTPAAQFCLGIQMSNTGNWMHIRYQSKLQA
RKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTP
RISTMRPLATAYKASTSDYQDNRVLQSDRSGTAGLEALAGIACLAASRRGQEAAATG

>gi568815596f:182978934_183195655|GENSCAN_predicted_CDS_4|1614_bp
atggggtttcaccatgttggccaggctggtcttgaactcctgacctcagtggtgggaatc
caaattacacagcaccaaaatatgttgtcagcggcaaatccatacgggtctgcaacaaca
attcttgtgtcctcaggagagaatctgactaaggggcataaggcagaagagaccaagaca
agttttagagcaggagtgaagtacccacaaatcaggaagcattcccggatgaaaagcatt
cacagaaccatacgctggttcgccaccttcccggtgcaaaaaccctttcctcggaaattc
tcagcgcaaagactttgccctattccaaaatggctccggcgcctacaacttaagcatagc
gcaggtccggaagttacgcaaccccataaggtagcacgccgttacccgtggggagcgttt
ccgccatttttgaaaattaattgggaaggatctgaaccaatgatgctgggttcacccaca
tctccaaagccaggagttaatgcccagttcttacctggatttttaatgggggatttgcca
gctccggtgactccacaacctcgatcaattagtggcccttcagtaggagtaatggaaatg
agatcacctttacttgcaggtgggtcaccaccacaaccagttgtaccagctcataaagat
aaaagtggcgctccaccagttagaagtatatatgatgacatttctagcccaggacttgga
tcaacacctttaacttcaagaagacagccaaacatttcagtaatgcagagtcctcttgtt
ggagttacatctactcctggaacagggcaaagtatgtttagtccagcaagtatcggtcag
ccacgaaagacgacattatctcctgcccagttggatcctttttatactcaaggagattct
ttgacttcagaagatcacctcgatgactcttgggtgactgtatttggggtacagcctccc
tcctggctgttttcccgtgctggcattgcgtgtatgggttttccaggcacagagtgcaag
ctgtcagtggatctaccattctggggactggaggatggtggccctcttctcacagcccca
ctaggcagtgccctagtagggaccctgtgtgggagctttgaccccacagttcccttccgc
actgccctagcggaggttctccatgagggccccacccctgcagcacaattttgcctgggc
atccagatgtctaatacaggaaattggatgcatattcgttatcaatctaaactgcaggct
cggaaagccttaagcaaagatgggaggatttttggagaatccatcatgattggtgtaaaa
ccatgtattgacaaaagtgttatggaaagcagtgacagatgtgctttatcatctccatct
ttagcctttacaccaccaatcaaaactctaggtacaccaacacaacctggaagtactcct
aggatttctaccatgagacctcttgctacagcatacaaagcctctactagtgattatcag
gacaacagggtgctacaatcagacagaagtgggacagctgggctggaagctctagcaggc
attgcttgcctggctgccagccgtaggggacaagaggctgcagccactggctga

>gi568815596f:182978934_183195655|GENSCAN_predicted_peptide_5|104_aa
XLRKQPGSSDCVEFTPAQKSDCGQTSSLDSSSLGRASLKESQQPQSGTYRQTGSGVDLQQ
TPADLQKRGPTVKRKTNKQKARTSTSTKRTPTQKPHPKVINIKD

>gi568815596f:182978934_183195655|GENSCAN_predicted_CDS_5|315_bp
ntgttaaggaagcaaccgggaagttcagactgtgtggaattcaccccagcacagaaaagc
gactgtggccagacttcctctttagattcctcctcactgggcagggcatctctgaaagaa
agccagcagccccagtcagggacttataggcaaacagggtctggagtggacctccagcaa
actccagcagacctgcagaagaggggaccaactgttaaaaggaaaaccaacaaacagaaa
gcaaggacatcaacatcaacaaaaaggacacccacacaaaaaccgcatccaaaggtcatc
aacatcaaagactaa