GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:28:42

Sequence gi568815595f:10917212_11136963 : 219752 bp : 48.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1118   1242  125  2  2  123  111   120 0.859  18.03
 1.02 Intr +   8793   8905  113  1  2   99  110   146 0.176  18.00
 1.03 Intr +  11991  12128  138  2  0   62  105   151 0.975  14.86
 1.04 Intr +  14439  14492   54  2  0   85   85    26 0.657   1.18
 1.05 Intr +  15940  16042  103  0  1   84  101   190 0.995  19.65
 1.06 Intr +  16855  16955  101  2  2   65   91   177 0.999  15.53
 1.07 Intr +  17818  17988  171  0  0  100   78   255 0.721  25.84
 1.08 Intr +  20059  20170  112  0  1   66  109    16 0.099   1.45
 1.09 Intr +  23972  24057   86  0  2  135   89   -17 0.005   2.64
 1.10 Intr +  26441  26584  144  1  0   85   89    67 0.177   6.98
 1.11 Intr +  31452  31569  118  2  1   57   70    38 0.028  -1.06
 1.12 Intr +  37292  37342   51  0  0   72   72    50 0.077   0.68
 1.13 Intr +  39733  39786   54  2  0  115   91    59 0.971   7.85
 1.14 Term +  40826  40935  110  0  2   44   43   139 0.774   3.67
 1.15 PlyA +  41889  41894    6                               1.05

 2.00 Prom +  51835  51874   40                              -7.56
 2.01 Init +  54129  54178   50  2  2   48   61   130 0.857   6.72
 2.02 Intr +  60152  60200   49  2  1   97   65    32 0.103   0.48
 2.03 Intr +  68967  69024   58  2  1   84   63    70 0.038   2.56
 2.04 Intr +  84211  84260   50  2  2   98   94    54 0.467   5.40
 2.05 Intr +  93061  93216  156  0  0  108   68    33 0.411   3.51
 2.06 Intr +  94076  94114   39  1  0   84  103    15 0.250   1.02
 2.07 Intr +  98461  98522   62  0  2  140   97    22 0.945   5.83
 2.08 Intr +  99909  99950   42  0  0  101   13    95 0.606   0.66
 2.09 Intr +  99976 100238  263  1  2   59   61   566 0.902  48.13
 2.10 Intr + 100632 100763  132  1  0   87  110   133 0.935  16.02
 2.11 Intr + 101387 101487  101  0  2   79  113   168 0.992  18.23
 2.12 Intr + 103002 103111  110  2  2   69   64   158 0.906  10.58
 2.13 Intr + 105125 105257  133  2  1   68  116   119 0.921  13.35
 2.14 Intr + 108238 108372  135  0  0   86  105   276 0.978  29.86
 2.15 Intr + 108562 108665  104  0  2   86   36    85 0.798   2.07
 2.16 Intr + 109024 109148  125  1  2  134   82   264 0.992  30.63
 2.17 Intr + 111524 111636  113  0  2   89   94   119 0.998  12.70
 2.18 Intr + 112010 112141  132  1  0   28  115   214 0.510  18.94
 2.19 Intr + 113966 114068  103  1  1  120  113    71 0.999  12.55
 2.20 Intr + 116428 116528  101  2  2   92   95    39 0.999   4.83
 2.21 Intr + 117320 117487  168  1  0  139  115   137 0.999  21.64
 2.22 Term + 119651 119755  105  1  0   87   46   146 0.916   8.71
 2.23 PlyA + 122014 122019    6                               1.05

 3.00 Prom + 123956 123995   40                              -5.36
 3.01 Init + 126264 126424  161  2  2   73   32   143 0.487   6.50
 3.02 Intr + 126945 127074  130  0  1   65   91    24 0.447   1.10
 3.03 Intr + 130542 130643  102  2  0   23   93    79 0.501   2.27
 3.04 Intr + 133795 133961  167  0  2   62   31    77 0.165  -1.84
 3.05 Intr + 139412 139565  154  2  1  118   53    62 0.274   5.77
 3.06 Term + 142465 142518   54  0  0  100   40    90 0.263   2.96
 3.07 PlyA + 143080 143085    6                               1.05

 4.00 Prom + 150545 150584   40                              -3.06
 4.01 Init + 152995 153207  213  0  0   69  101    52 0.031   3.34
 4.02 Intr + 163914 163945   32  2  2   88   93   -23 0.001  -4.87
 4.03 Intr + 174301 174550  250  1  1   62   42   205 0.099  10.74
 4.04 Intr + 181593 181722  130  2  1   76   95    17 0.023   1.47
 4.05 Intr + 209400 209637  238  1  1   86   55   149 0.326   8.07
 4.06 Intr + 213515 213625  111  2  0   65  103    20 0.065   0.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 176806 176633  174  1  0  128   48    92 0.861   6.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:10917212_11136963|GENSCAN_predicted_peptide_1|493_aa
XDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPL
SPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSVISYFLG
LVMLTEKICRSGLTAAFPSNCPPEGGMYIFQLFDSYAASGMCLLFVAIFECICIGWVYGS
NRFYDNIEDMIGYRPPSLIKWCWMIMTPGICAGIFIFFLIKYKPLKYNNIYTYPAWGYGI
GWLMALSSMLCIPLWICITVWKTEGTLPESLDTNPGTWLWNACSSPRSMPEPGTVPGTEE
APINRTDRGFCGTEKSSNLPTVTQLVNIRTRKRTQDRSLDEQVPSLPQSGEPWEKEYIGI
EDLLSAGDHTRHFPMHYLALNCLGQLHDNQASFSRERKEAPGSAKAGPLKKFIAQRGLWH
LKGSSHPTMDAAGLGAVDVGEIEYNTDPSIRCKESLQGLCEVTCIVHRCLKQSLGRTSCH
QCKPFTVIIENDV

>gi568815595f:10917212_11136963|GENSCAN_predicted_CDS_1|1482_bp
nnggactgcatcatgctctgttgcctgaacagcggcaccagcttcgtggctgggtttgcc
atcttctcagtcctgggttttatggcgtacgagcagggggtacccattgctgaggtggca
gagtcaggccccggcctggcctttattgcgtaccccaaggcggtcaccatgatgcctctc
tccccgctgtgggccaccttgttcttcatgatgctcatcttcctgggcctggacagccag
tttgtgtgtgtggaaagcctggtgaccgccgtggtggacatgtaccccaaggttttccgg
aggggttaccggcgggagctgctcatcctagccttgtctgttatctcctattttctgggc
ctcgtgatgttaacagagaaaatctgcagatctggcctcacagctgcattccccagcaac
tgccctccagagggtggcatgtacatcttccagctctttgactcctatgccgccagtggg
atgtgccttctcttcgtggccatctttgagtgcatctgcatcggctgggtgtatggaagc
aaccggttctatgataacattgaagacatgattggctaccggccaccgtcgctcattaag
tggtgctggatgatcatgacccctgggatctgcgcggggatcttcatcttcttcttgatc
aagtacaagccactcaagtacaacaacatctacacctacccagcctggggctatggcatt
ggctggctcatggccctgtcctccatgctctgcatcccgctctggatctgcatcacagtg
tggaagacggaggggacactgcccgagagcctggacacaaacccaggcacctggctttgg
aacgcgtgctctagccccagatccatgccagagcctggcacggtgcctggcacagaggag
gcacctattaatcgcacagataggggattttgcggcacagaaaagtcaagcaatttgccc
acggtaacacagctagtaaacatcaggaccagaaagagaactcaggacaggagcttggat
gaacaagtgcccagcttgccccagagtggggagccatgggaaaaggaatacataggcatt
gaagacctactcagtgctggagaccataccagacactttcctatgcattaccttgccctc
aactgccttggccagctgcatgacaaccaggcatcgttcagcagggagaggaaggaggcc
ccagggtcggcaaaggctgggcctttgaagaagttcatagctcagcgtggtctctggcat
ctcaaagggtcttcccaccccaccatggatgcagctggtttaggagcagttgacgtgggg
gagattgaatataacactgatccctccatccgttgcaaggaatctttacaaggcttatgt
gaggttacgtgcatcgtgcatcgatgtttgaaacagagcctcggcagaacaagctgtcac
cagtgcaagccgttcacggtgataatcgagaacgatgtgtga

>gi568815595f:10917212_11136963|GENSCAN_predicted_peptide_2|776_aa
MEEEEIKERFLEEEASNPAQEFLAFHGAKRTQETMKKKFEEISAFPEQRPQETLSEWDTS
LHFVEVQSQVLSGAQDSAFLTGSQVMLMLSLEEPHFEKQGPESLGNLRPQAGKAVSLSVR
WPFLGSQRETLKLTDLTQGGRRRPSGADPPPTTIRVPLSRKTAVHVDRGTPASKFRDMAT
NGSKVADGQISTEVSEAPVANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGYAIG
LGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFK
GVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYSMVNTT
NMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFS
ATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSL
IALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPGL
AFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELF
IAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDN
IQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVFPKWGQGVGWLMALS
SMVLIPGYMAYMFLTLKGSLKQRIQVMVQPSEDIVRPENGPEQPQAGSSTSKEAYI

>gi568815595f:10917212_11136963|GENSCAN_predicted_CDS_2|2331_bp
atggaagaagaagagatcaaggaacgcttcctggaagaagaagcatcaaacccagcccag
gagtttctggccttccacggtgcaaagagaactcaggagaccatgaaaaagaagtttgaa
gaaatcagtgcctttcccgaacagaggccccaagagaccttgtcagaatgggatacttcc
ctgcacttcgtggaggtgcagagtcaggtcttgagtggggcccaagattctgcatttctg
acaggctcccaggtgatgctgatgctgtctcttgaagaaccgcactttgagaagcaaggc
cctgaatcactgggcaatttgagaccccaggctggcaaggctgtttccttatctgtcaga
tggccttttctgggcagccagagggagactcttaaactaaccgatctcacccagggtggc
agaaggaggccttctggagctgacccacccccgacgaccatcagggtgcccttgagccgc
aaaactgctgtccacgtggaccgggggacccctgcgtccaaattccgagacatggcgacc
aacggcagcaaggtggccgacgggcagatctccaccgaggtcagcgaggcccctgtggcc
aatgacaagcccaaaaccttggtggtcaaggtgcagaagaaggcggcagacctccccgac
cgggacacgtggaagggccgcttcgacttcctcatgtcctgtgtgggctatgccatcggc
ctgggcaacgtctggaggttcccctatctctgcgggaaaaatggtgggggagccttcctg
atcccctatttcctgacactcatctttgcgggggtcccactcttcctgctggagtgctcc
ctgggccagtacacctccatcggggggctaggggtatggaagctggctcctatgttcaag
ggcgtgggccttgcggctgctgtgctatcattctggctgaacatctactacatcgtcatc
atctcctgggccatttactacctgtacaactccttcaccacgacactgccgtggaaacag
tgcgacaacccctggaacacagaccgctgcttctccaactacagcatggtcaacactacc
aacatgaccagcgctgtggtggagttctgggagcgcaacatgcatcagatgacggacggg
ctggataagccaggtcagatccgctggccactggccatcacgctggccatcgcctggatc
cttgtgtatttctgtatctggaagggtgttggctggactggaaaggtggtctacttttca
gccacatacccctacatcatgctgatcatcctgttcttccgtggagtgacgctgcccggg
gccaaggagggcatcctcttctacatcacacccaacttccgcaagctgtctgactccgag
gtgtggctggatgcggcaacccagatcttcttctcatacgggctgggcctggggtccctg
atcgctctcgggagctacaactctttccacaacaatgtctacagggactccatcatcgtc
tgctgcatcaattcgtgcaccagcatgttcgcaggattcgtcatcttctccatcgtgggc
ttcatggcccatgtcaccaagaggtccattgctgatgtggcggcctcaggccccgggctg
gcgttcctggcatacccagaggcggtgacccagctgcctatctccccactctgggccatc
ctcttcttctccatgctgttgatgctgggcattgacagccagttctgcactgtggagggc
ttcatcacagccctggtggatgagtaccccaggctcctccgcaaccgcagagagctcttc
attgctgctgtctgcatcatctcctacctgatcggtctctctaacatcactcaggggggt
atttatgtcttcaaactctttgactactactctgccagtggcatgagcctgctgttcctc
gtgttctttgaatgtgtctctatttcctggttttacggtgtcaaccgattctatgacaat
atccaagagatggttggatccaggccctgcatctggtggaaactctgctggtctttcttc
acaccaatcattgtggcgggcgtgttcattttcagtgctgtgcagatgacgccactcacc
atgggaaactatgttttccccaagtggggccagggtgtgggctggctgatggctctgtct
tccatggtcctcatccccgggtacatggcctacatgttcctcaccttaaagggctccctg
aagcagcgcatccaagtcatggtccagcccagcgaagacatcgttcgcccagagaatggt
cctgagcagccccaggcgggcagctccaccagcaaggaggcctacatctag

>gi568815595f:10917212_11136963|GENSCAN_predicted_peptide_3|255_aa
MSEGEIKGSSDVFTDVSPDTVKENVLVFYLRLVSVQVRQEADAKTNVAAKWTCGSSPNYR
NVEARKRYPYFLNAFCVPGTFSWNTVYSSPQTYRTLQRNEVTRFKKTLNECMHACMKEKD
TEYSVTLEEPKTLILLRYQVALRYRGVGGRALPLFRGMTDPRQSCHSIFLEVIGGVTGMG
AIMANEVSPEPRAQPEAEPQSPNQHVTQSDELWLRIPARASLAAGRGAAQGRWNGKGPAA
AKDISVVQVGHLVST

>gi568815595f:10917212_11136963|GENSCAN_predicted_CDS_3|768_bp
atgagcgaaggagaaatcaagggttccagtgatgtgtttactgatgtttcacctgatact
gtcaaagagaatgtcttggtgttttacttgaggttggtgtcagttcaggtccgccaagaa
gcagatgccaagacaaatgtagcagcaaaatggacctgtggcagttctccaaattacagg
aatgtggaggcaaggaaaagatatccttatttcctgaatgccttctgtgtgcccggcact
ttctcgtggaatactgtttactcctcaccacaaacctacagaacattgcagagaaatgaa
gtgactcgctttaaaaaaacactgaatgaatgcatgcatgcgtgcatgaaggaaaaagat
acagagtactctgtgaccctagaggagccaaagactctgatcttgctcaggtatcaggtg
gccttgcgctacagaggggtggggggcagagctctgcccttgttccggggcatgactgat
ccacgtcaatcatgccactccattttcctggaagtgattggtggagtcacgggcatggga
gcaattatggccaatgaggtcagcccagagcccagggcgcagccagaggcagagccccaa
agccccaaccagcatgtaactcaaagtgatgaactctggcttcggatcccagcaagggcg
tcgctggcagctggaaggggtgctgctcagggtcgctggaatgggaagggtccagcagca
gccaaagacatctccgtggtacaagtcggccatctggtgtctacatag

>gi568815595f:10917212_11136963|GENSCAN_predicted_peptide_4|325_aa
MVCPEFVPSDVWTCSEFLPSGGFVVSLASGVKLQTFAVSVTVLKPARLELFIPPGGFVVS
LASEVKLQTFAVSTLFLERARLPFEVCISDSRFQVKLLTNPSGFQRKDRAYWQRPTPNGQ
VIFLRKEQLNGAQRGRSSNSDDRGGPYGAATAITLAAGAAARAAVPVIAVTVDITPRSRL
GLNGLKLIPFLFAVIILGWAHEPVLAMRFNLYTVPPWAKSNGSQRAKKHVDFILVNTWGH
SRVDTGIEWIRMNGPNTLLQDTEQSPKGGREQASDACRRELQAEGQHGVCVLKDLNWRPS
HCNSTVSWEPESVSTVPSKAPCFPR

>gi568815595f:10917212_11136963|GENSCAN_predicted_CDS_4|975_bp
atggtgtgtccggagtttgttccttctgatgtttggacgtgttcggagtttcttccttct
ggtgggtttgtggtctcgctggcttcaggagtgaagctgcagacctttgcagtgagtgtt
acagttcttaagccagcgcgtctggagttgttcattcctcccggtgggtttgtggtctcg
ctggcctcagaagtgaagctgcagacctttgcggtcagcacactttttctagaaagggcc
agactcccctttgaagtctgcatctctgacagcaggttccaagtaaagctcctcaccaac
ccttcaggattccaaagaaaggacagagcttactggcaaaggcccacccccaatggccag
gtcatctttctaagaaaggagcagctgaatggggcacaaagagggcgctcatctaatagt
gatgaccgtggcgggccgtacggagcagccactgctatcacgctggctgcaggagcagct
gctagagcagcggtgccagtcattgcagtaacagtggacatcaccccaagatctaggcta
ggcctcaacggtctgaaattaatcccattcctgtttgcagtgattatcttaggatgggca
catgaaccagttctggccatgagattcaatctttacacagtgcccccatgggccaaatcc
aatggaagccagagggccaagaagcatgttgatttcatcctagtcaacacctggggacac
agcagagtggacaccggtattgagtggatccggatgaatggaccaaacacactcctacag
gacactgagcaaagccccaaaggaggcagggagcaggccagtgacgcctgcaggagagaa
ctccaggcagaggggcagcatggtgtctgtgtcttaaaggatctgaactggcgccccagc
cattgcaatagcactgtgagctgggaacccgagtctgtttctaccgtgccatccaaggcg
ccctgcttcccacgn