GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:52:55

Sequence gi568815596f:202841903_203083621 : 241719 bp : 39.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    547    542    6                               1.05
 1.02 Term -   2685   2564  122  1  2  101   43    99 0.744   4.36
 1.01 Init -   3142   3058   85  1  1   34  101    66 0.560   3.53
 1.00 Prom -   5814   5775   40                              -6.05

 2.04 PlyA -   6422   6417    6                              -0.45
 2.03 Term -   8155   7983  173  2  2   82   51   137 0.090   6.41
 2.02 Intr -  29871  29717  155  2  2   55  119   195 0.996  18.09
 2.01 Init -  29974  29904   71  1  2   62   24   147 0.986   4.27
 2.00 Prom -  33850  33811   40                              -4.15

 3.13 PlyA -  33943  33938    6                               1.05
 3.12 Term -  39035  38958   78  2  0   88   48    50 0.841  -2.22
 3.11 Intr -  40881  40809   73  2  1   66   78   113 0.985   6.59
 3.10 Intr -  41839  41707  133  2  1   96   94   118 0.999  11.98
 3.09 Intr -  42401  42296  106  2  1  121  113    -9 0.999   3.77
 3.08 Intr -  42633  42493  141  0  0   92   91    93 0.975   9.63
 3.07 Intr -  54317  54163  155  0  2  109  106    20 0.860   4.77
 3.06 Intr -  55513  55398  116  0  2   80   72   134 0.952  10.17
 3.05 Intr -  57735  57629  107  0  2   68   27    85 0.931  -1.51
 3.04 Intr -  59217  59123   95  1  2   70   89    91 0.880   6.16
 3.03 Intr -  66057  65963   95  2  2   99   64   127 0.659  10.09
 3.02 Intr -  69643  69534  110  1  2   13  100    76 0.232  -0.54
 3.01 Init -  70716  70615  102  0  0   59   36   136 0.171   5.81
 3.00 Prom -  76126  76087   40                              -8.15

 4.00 Prom +  76226  76265   40                              -6.45
 4.01 Sngl +  82798  83280  483  0  0   68   36   429 0.736  31.52
 4.02 PlyA +  84466  84471    6                               1.05

 5.00 Prom +  85608  85647   40                              -3.55
 5.01 Init + 100001 100114  114  1  0   84   60    93 0.615   6.36
 5.02 Intr + 100838 101065  228  1  0   33  101   128 0.667   5.74
 5.03 Intr + 110657 110777  121  1  1   52   84   123 0.530   7.45
 5.04 Intr + 112103 112232  130  0  1   65  100   127 0.989  10.43
 5.05 Intr + 113772 113856   85  0  1   77  105    37 0.986   3.20
 5.06 Intr + 119335 119524  190  0  1   43   80   138 0.965   6.74
 5.07 Intr + 125076 125196  121  1  1   80  111    59 0.958   6.03
 5.08 Intr + 128017 128160  144  1  0   48   52   148 0.969   5.68
 5.09 Intr + 129603 129836  234  0  0   85   82    96 0.796   4.58
 5.10 Intr + 132432 132594  163  0  1   86   72    28 0.134   0.06
 5.11 Intr + 140170 140539  370  0  1   47   83   261 0.059  15.25
 5.12 Intr + 144208 144236   29  2  2  107  103   -21 0.088  -1.78
 5.13 Term + 164764 164964  201  0  0   60   43   146 0.971   3.71
 5.14 PlyA + 166761 166766    6                               1.05

 6.00 Prom + 168332 168371   40                              -5.75
 6.01 Init + 172659 172806  148  2  1   77   85    88 0.744   5.98
 6.02 Term + 172849 172910   62  2  2   62   38   124 0.459   1.79
 6.03 PlyA + 174409 174414    6                               1.05

 7.00 Prom + 196496 196535   40                              -6.65
 7.01 Init + 198206 198795  590  1  2   76   -8   593 0.041  43.24
 7.02 Intr + 207912 208073  162  0  0  106   70    74 0.287   5.57
 7.03 Intr + 214525 214606   82  1  1   87   58    33 0.085  -1.08
 7.04 Intr + 215424 215551  128  2  2   70   75   100 0.060   5.46
 7.05 Intr + 216746 216929  184  2  1   -8   59   129 0.027  -0.73
 7.06 Intr + 241317 241623  307  2  1   69   80   227 0.040  15.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 140374 140539  166  0  1   97   83   232 0.876  23.44
S.002 Sngl + 198206 198817  612  1  0   76   32   591 0.903  48.24
S.003 Init + 241350 241623  274  2  1   81   80   212 0.922  16.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_1|68_aa
MTYRIRERLEDAMLLALKMEEGGPHARKWKPLVIQLPLTGLLNLILVLGYEDYLALTVSY
IQKLDHCQ

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_1|207_bp
atgacatatagaattagagaaagattagaagatgctatgctgctggccttaaagatggag
gaagggggaccacatgccaggaaatggaagcctctggtgattcagttacctctgactggc
ttgttgaatttaattttagtgctcggttatgaagattatttggctctcacagtaagctat
atccagaaacttgaccattgtcagtag

>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_2|132_aa
MLRSRVGPVAGSGRRPRGANADASGSLTPPRTGAEGHWLPEGRESARGSRAVAGTGAGTD
HRTAERDPRRRKSGAGPSSAGLLQFAGGLLYNLFAWVSPAEATEQQRLLPVPSSESFVPE
GHQPDASWNSPV

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_2|399_bp
atgctccgatcccgagtcgggccggtggcggggtcaggccggcgcccgaggggggcgaac
gcggacgccagcgggagcctgacacctccacgcactggtgcggaggggcactggctgccg
gagggccgggagtcggcgcggggctcgcgggcggtggccggaacgggtgccgggacggat
caccgtacggccgaacgcgacccgaggaggcggaagagcggcgccggcccctcttctgca
ggtctgctacagtttgctggaggtctactctataacctgtttgcctgggtatcaccagca
gaggctacagaacagcaacgattgctgcctgttccttcctctgaaagctttgttccagag
gggcaccagcctgatgccagctggaactctcctgtatga

>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_3|436_aa
MWDPEKAPKLGAEGAASDRLRLGAEAGSCSELRRAGASCCGSANPYVSVGKSCVLLAMAQ
LQTRFYTDNKKYAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLR
MPLDKHMEMENISSEEVVEIEYVEKYTAPQPEQCMFHDDWISSIKGAEEWILTGSYDKTS
RIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALH
CCRGHAGSVDSIAVDGSGTKTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVES
GSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTS
VKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN
KLYSYRYSPTTSHVGA

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_3|1311_bp
atgtgggaccccgaaaaggcccccaagcttggcgcggaaggcgccgccagtgaccggctg
cggctgggggcggaggccggcagttgctcggagctccggcgggcaggagcttcgtgttgt
gggtctgctaacccgtacgtttccgtgggcaagtcgtgtgtactcctcgccatggctcag
ctccaaacacgcttctacactgataacaagaaatatgccgtagatgatgttcccttctca
atccctgctgcctctgaaattgccgaccttagtaacatcatcaataaactactaaaggac
aaaaatgagttccacaaacatgtggagtttgatttccttattaagggccagtttctgcga
atgcccttggacaaacacatggaaatggagaacatctcatcagaagaagttgtggaaata
gaatacgtggagaagtatactgcaccccagccagagcaatgcatgttccatgatgactgg
atcagttcaattaaaggggcagaggaatggatcttgactggttcttatgataagacttct
cggatctggtccttggaaggaaagtcaataatgacaattgtgggacatacggatgttgta
aaagatgtggcctgggtgaaaaaagatagtttgtcctgcttattattgagtgcttctatg
gatcagactattctcttatgggagtggaatgtagagagaaacaaagtgaaagccctacac
tgctgtagaggtcatgctggaagtgtagattctatagctgttgatggctcaggaactaaa
actcccatagtgaccctctctggccacatggaggcagtttcctcagttctgtggtcagat
gctgaagaaatctgcagtgcatcttgggaccatacaattagagtgtgggatgttgagtct
ggcagtcttaagtcaactttgacaggaaataaagtgtttaattgtatttcctattctcca
ctttgtaaacgtttagcatctggaagcacagataggcatatcagactgtgggatccccga
actaaagatggttctttggtgtcgctgtccctaacgtcacatactggttgggtgacatca
gtaaaatggtctcctacccatgaacagcagctgatttcaggatctttagataacattgtt
aagctgtgggatacaagaagttgtaaggctcctctctatgatctggctgctcatgaagac
aaagttctgagtgtagactggacagacacagggctacttctgagtggaggagcagacaat
aaattgtattcctacagatattcacctaccacttcccatgttggggcatga

>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_4|160_aa
MGQMSALTPRTSPGWATAAASGVAWTLAWVWREAMPGLVVWRSITAATVTQSLPSPLKLD
VHTNTQAVCTPEKLQIKTLNKFAPFTEKVPFLEQQNKILETKWILLQQQKVAWSNMDSMF
ESYINNLKQQLDTLSQEQLKLEAELGNMERPVEDYQKCEV

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_4|483_bp
atgggccagatgtctgcattaactcctagaacttctcctggatgggcaacagcagcagct
tccggggtagcctggacactggcatgggtctggagggaggctatgccaggtctggtggta
tggaggagcatcacagctgccacagtgacccagagcctcccgagtccccttaagctggat
gtgcacaccaacacccaggctgtatgcaccccggagaaattgcagatcaagaccctaaac
aagtttgcccccttcactgagaaggtacccttcctggagcagcagaacaagatactggag
accaagtggatccttttgcagcagcaaaaagtagcttggagcaacatggacagcatgttt
gagagctacatcaacaacctaaagcagcaactggacacactgagccaggagcagctgaag
ctggaggcagaacttggcaacatggagagaccagtggaggactatcaaaagtgtgaagtt
taa

>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_5|709_aa
MEQSNDSLRVNHNDGEESKTSAQVFEVWIQLGTFFHPRHLICMDSRDSSFGQNDSPTVLP
ITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASP
TENGQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSN
YILHPQTSFPLPKKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSET
ELESVLTFHKQQTQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQY
GPRRKGFQLKKVSEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQE
KAFNMLKKNLVDAGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRD
ENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPT
VNDIKNHIHEVQKSLRNGDTVYNSEIIPATGLQLQPRYTSPDESPAVVSVNNQPSSSPSG
LLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGD
VEDTGNLEGTVHRILLGDVQTIPIQIIDNHSALSRNWSYQYFHISKYVRQKLIELQGEMD
ESTIIVGDLSTPLLYKRTDPSSRHKDIVELNSNIDICRLLIQQQQNTHS

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_5|2130_bp
atggaacaatctaatgattcattaagagtcaaccataatgacggtgaagagtcaaaaacc
agtgctcaagtatttgaggtatggattcagctgggaacctttttccatcctaggcatcta
atctgtatggactccagggattcttcctttggacaaaatgattctcctacagttttgccc
atcactactcgtgaagcaaataattcactcatatcacagaatataccagggcccctgact
cagacacagactctttctgcagagcaattccatctagtggaccaaaatgggcaggctatt
caatatgaacttcagtcattgggggaatccaatgcacaaatgatgatcgttgccagccca
acagaaaatggacaggtacttcgtgtaattccacctacccagacaggaatggcacaagtg
attatacctcaggggcaacttgtggatgtgaatagtcctcgggatgtccctgaagagaaa
cccagtaacagaaacttaccaactgtaagagtggatactctagcagacaataccagcaat
tacattcttcatcctcaaacatccttcccattgcccaaaaagtcagtgaccggaatgctg
gaagaaccccttctggggcctcttcagccactttcttctaatacacctatatgggcctgc
cgtcttaggagctgtgagaaaattggagattcataccgtggctactgtgtaagtgagact
gaattagaaagtgtcctaacatttcacaagcagcaaacacagagtgtttgggggacccgt
cagtctccaagcccagccaagcctgctacacgcttgatgtggaaatcccagtatgttcca
tatgatggaatcccatttgttaatgcagggagtagagctgtggtaatggagtgtcagtat
gggccaagaagaaaaggtttccagttaaaaaaagtcagtgagcaggaaagcaggtcttgt
cagctctacaaagccacttgtccagctcggatttacattaaaaaggtacagaagtttcct
gaatatagagttcctacagaccccaaaattgacaagaaaattatcagaatggagcaggag
aaagcttttaacatgctaaagaagaacttggtagatgctggtggtgttcttaggtggtat
gtacagttacctacacagcaagctcatcagtatcatgaattagagactccctgcctcact
ttgtcaccttctccttttcctgtgtcttctcttgaagaagaggaaactgcagttagagat
gagaattgtgcattaccctcacgtttacatcctcaagtagcacataagattcaagaatta
gtatcacagggaatagaacaagtgtatgcagtaaggaaacagctaagaaaatttgtggaa
agggaactgttcaaacccgatgaggtacctgaaagacataatttatctttttttccaact
gtaaatgatataaaaaatcacatccatgaggtacagaaatccttgagaaatggagatacg
gtatataactcagagattattccagcaacgggtttgcagttacaaccaaggtacacctct
cctgatgaatcaccagctgtggtatcagtaaataaccagccgtcctctagtccttcagga
cttctggatacaataggaagtgctgtaatgaataataattctctactgcttggtcaaagt
catagccttcaaagagatacatgcttaacccaaaacaatagtactgcctccaccatgggt
aaccttccagaaccagatcaaaatctagttgcaatggacgagctggtagaagttggagat
gttgaggatacagggaatctggaaggaactgttcatcggattctgttgggagatgtgcag
actattccaatacagattatagacaaccactcagctcttagtagaaactggagctatcaa
tattttcatatatcaaaatatgtgaggcaaaaactgatagaactccaaggagaaatggat
gaatccactattatagttggagacttaagtacccctctattatataaacggacagatcca
tcaagcagacataaggacatagttgaattgaacagtaacatcgacatctgtcgactactt
atccaacaacagcagaatacacattcttaa

>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_6|69_aa
MTPSAKSGAGVDVSTSALLHVQLREGSFQCRGRRPPRDGQPEPVDCGCAAYATIEQLPPN
GWVNPQRPK

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_6|210_bp
atgacgccatcagcgaaaagcggggcgggcgtagacgtcagcacgtcagccctcctccat
gtccagctgagggaaggctcgtttcagtgccgcggccggcgcccgccaagggatgggcag
ccagagcctgtcgactgcggctgcgcagcctacgcgaccattgaacagctgccgcccaac
ggctgggtaaatcctcagcggccgaaatga

>gi568815596f:202841903_203083621|GENSCAN_predicted_peptide_7|485_aa
MAEQEQRKIHLVPENLLKKRKAYQALKATQAKQALLAKKEQRKGKRLRFKRLESFLHDSW
RQKCDKVHLRRLEMRPHALELPDKHAMAFVVHIKRINGMSLPVERTVVRLRLKKMFSGVF
VKVNPQNLKMLLIVETYVTWGFPNLKSVRELTWKHEQAKVKNKTIPLTDNTVIEEHLEKF
GDICLEDLIHEIAFPGKVDDMPPGISLLPDNILQVLRIQLLQCVQKMADGLEEQQQALSI
LLVKFFIILCRNLSNVEEIGTCSYINYVITMTTLYIQQLKSKKKEKEMADQTCIEEFVIH
ALAFCESLYDPYRNWRHRISGILAGVMLMSIEKKSNVEPVVALFLPRFIWYPLLGSPKGR
QLEKESLHDACRSITKQREYRRRNALQAISPATMEVLMRVLADCDSWEDGDPEEVGRKAE
LTLKCLTEVVHILLSSNSDQRQVETSTILENYFKLLNSDHSALPNQRRSRQWENRFIALQ
IKMLX

>gi568815596f:202841903_203083621|GENSCAN_predicted_CDS_7|1455_bp
atggcagagcaagagcaaagaaaaatccatttggttccagaaaatctcctgaaaaagagg
aaggcttatcaagccctcaaagccactcaggcaaagcaggcacttttggcaaagaaggag
cagaggaaaggaaaaaggctcaggtttaagcgactggaatcattcctacatgattcctgg
aggcagaaatgtgacaaggtgcatctcagacgactagaaatgagacctcatgccttggaa
ttgccagataaacatgccatggcctttgttgtacacatcaaaaggattaatggcatgagt
ttaccggtggagagaaccgttgtaagacttcgcctgaagaaaatgtttagtggtgtcttt
gtaaaagtcaacccccagaacctaaaaatgctgcttatagtggaaacttatgtgacctgg
ggatttccaaatctgaagtctgtgcgggaactcacttggaaacatgaacaagccaaggtc
aagaataagaccatccctctgacagacaacacagtgattgaggagcacctggagaagttt
ggtgacatttgcttggaagacctcattcatgaaattgccttcccagggaaggtagatgat
atgcctccaggaatatctctgcttcctgataatattctgcaggttctgaggatccagctt
ctacagtgtgttcagaaaatggcagatgggttagaggaacaacagcaagccttgtcaatt
ttgcttgtcaagttcttcattattctttgcagaaatctatcaaatgtggaagaaattggg
acttgctcgtacattaattatgtcatcaccatgacaacactctatattcagcaattaaaa
agcaaaaaaaaagagaaggaaatggcagatcagacatgtattgaagaatttgtgatccac
gcattggcattttgtgaaagcttatatgatccatatcggaattggagacatagaatttca
ggaattcttgctggagtgatgctgatgagtatagagaaaaagagcaatgtggaaccagtt
gttgctctctttcttccacgcttcatctggtaccctctattagggagcccaaaagggagg
cagctggaaaaagaaagtttgcatgatgcctgccgcagcatcacaaagcagagagaatat
agaaggaggaatgctttgcaagcaatttctccagccactatggaagttcttatgcgagta
ttggcagattgtgattcctgggaggatggagatcctgaagaagtgggtaggaaggcagaa
ctaactctgaagtgccttacagaagtggtacatatccttctcagtagcaactctgatcag
cgtcaagtggaaaccagtactattctggagaactattttaaattgctaaattcagatcat
tcagctttacctaatcaaaggaggtccagacagtgggaaaaccgatttattgctctacag
atcaaaatgctgann