GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:16:36

Sequence gi568815586r:90951349_91156281 : 204933 bp : 35.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    579    574    6                               1.05
 1.01 Sngl -   3394   2174 1221  1  0   83   42  1193 0.975 109.75
 1.00 Prom -   3865   3826   40                              -4.75

 2.14 PlyA -   4327   4322    6                               1.05
 2.13 Term -  12978  12808  171  0  0   90   28   118 0.776   2.84
 2.12 Intr -  18791  18696   96  2  0   52   91    58 0.762   1.79
 2.11 Intr -  20654  20452  203  0  2   96  106   165 0.999  17.18
 2.10 Intr -  21632  21474  159  0  0  106   16    88 0.842   2.44
 2.09 Intr -  26462  26367   96  0  0   24   45   128 0.461   1.16
 2.08 Intr -  26914  26740  175  1  1  100   77   187 0.580  17.39
 2.07 Intr -  28011  27839  173  1  2   21   -2   153 0.323  -1.66
 2.06 Intr -  32200  32043  158  0  2   68   49    71 0.366  -0.07
 2.05 Intr -  32968  32864  105  0  0    8   77   144 0.494   3.71
 2.04 Intr -  33858  33759  100  1  1   75   72   117 0.499   7.05
 2.03 Intr -  36985  36861  125  0  2   87   27    85 0.117   1.61
 2.02 Intr -  47073  46994   80  0  2   58  100     1 0.160  -4.27
 2.01 Init -  51217  51053  165  1  0   65   74   207 0.902  16.68
 2.00 Prom -  59440  59401   40                              -3.65

 3.03 PlyA -  59736  59731    6                               1.05
 3.02 Term - 100170  99998  173  1  2   93   41   136 0.751   6.41
 3.01 Init - 104933 104048  886  2  1   65  106   430 0.492  37.12
 3.00 Prom - 107812 107773   40                              -3.15

 4.00 Prom + 110102 110141   40                              -4.95
 4.01 Init + 126109 126127   19  0  1   77  110    11 0.933   2.51
 4.02 Term + 127051 127211  161  2  2   24   37   322 0.988  17.82
 4.03 PlyA + 128063 128068    6                               1.05

 5.03 PlyA - 128404 128399    6                               1.05
 5.02 Term - 137367 137272   96  0  0   12   45   105 0.181  -4.41
 5.01 Init - 140496 140302  195  0  0   65   76   172 0.788  12.68
 5.00 Prom - 150721 150682   40                              -6.35

 6.03 PlyA - 151558 151553    6                               1.05
 6.02 Term - 152971 152817  155  2  2   99   34   162 0.990   9.00
 6.01 Init - 157631 156770  862  2  1   66   89   568 0.978  49.50
 6.00 Prom - 158789 158750   40                              -5.45

 7.05 PlyA - 158977 158972    6                               1.05
 7.04 Term - 169447 169341  107  2  2   82   38    61 0.048  -1.91
 7.03 Intr - 190241 190102  140  1  2   76   64   115 0.067   7.09
 7.02 Intr - 194904 194714  191  0  2   99   -2   120 0.068   1.56
 7.01 Intr - 200444 200306  139  1  1  111   95    78 0.994  10.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_1|406_aa
MTQTLDTREDPLNLGGGGGGGCGCGWAHSASLSSWSSCHRRRPGAPAYNRPHRYSPKTEY
GPPRKQPKQQHGPGFWFQPPVCSNWGCWGGPWRPPPPGFWKFPCPVQVFRVYGLHPLCFC
CCSCWSGSWNPGWVKPPGRKKRWGRRGRGLRHHPRHSYPRSPPADVSTLPRPVKLYEWRE
PGMRAPPNTTQFIMNQIYEDMRQQEKVERQQEALRAQKATVSGEASPARSSGNDAPPGGS
KETWGLQETLYGFVQNPSLAFSPNPEENQSLAPLLVEEEEEKKNDDEEEYDQEVCDAKEA
SEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEELEEEEEVLEENEQRGEEFHLP
LEMPLSIFVEAEEKRENFISCTFLNPEQIIPKVPQESLFMAQDFNC

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_1|1221_bp
atgactcagaccctcgacacaagggaagaccctctgaacctgggcggcggtggcggcggc
ggctgtggctgtggctgggcacactcggcctccttgagctcctggtcgtcctgccatcga
aggcgcccgggtgctccagcgtacaatagaccgcaccgatatagccccaagaccgagtat
gggcccccaaggaagcagccgaagcaacagcacggcccgggcttttggttccaaccaccc
gtgtgctctaactgggggtgctggggagggccctggcgcccaccccctccaggattctgg
aaattcccctgcccggtgcaagtgtttcgggtgtatggcctgcaccctctctgcttttgc
tgctgctcctgctggagcgggtcctggaaccctggctgggtgaagcccccaggcaggaag
aagcgctggggccgcagaggccgcggcctgcgccaccaccctcgccactcctacccgcgg
agcccgccagcggatgtgagcacgctgccgcggccggtcaagctgtatgagtggagagag
cctggcatgcgagcgccgcccaacaccacccaattcatcatgaaccagatctacgaggac
atgaggcagcaggagaaggtggagcgtcagcaggaggcgctgcgggcgcagaaggccacg
gtgagcggcgaggcctccccagccagatcctccggaaacgacgcgccccctggcggcagc
aaggaaacctggggactgcaggaaactctgtatggctttgtgcagaatccctctctagca
ttcagtcccaacccagaggaaaaccagtctcttgccccgctgctggtggaagaagaggag
gagaagaaaaatgatgatgaggaggagtatgaccaggaggtgtgtgatgcaaaggaggcg
agcgaggaggaagaagaggtcgaagatgaggaggaagaggtcgaagatgaggaggaagaa
gaggtcgaagaggctgaatatgtggaggagggagaggaggagctggaagaggaggagctg
gaagaggaagaggaggtcctggaggagaacgagcagagaggggaagaatttcacttgcct
ctggaaatgcctttatcaatcttcgtagaggctgaagaaaagagagagaactttataagc
tgcacttttttaaacccagagcagataattcccaaagtgccacaggaatccctgttcatg
gcacaggactttaactgttag

>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_2|601_aa
MKTLAGLVLGLVIFDAAVTAPTLESINYDSETYDATLEDLDNLYNYENIPVDKVENIYDP
LFSILEASFRPNNAIRVLYITHYIVITNQLESRIKKLLLMASEESFPLIGHFKYHFSMMR
TSEIFLEHRSADVYDSSPHDLGRGPSGDPYWGQLADQTHNGPWTLLIGIVALTNAAAETP
VFLLDHKEDQGSSARKYKKSRSWFQANQRSQLRRVRVVKEPFPRKPDTHVFSLAAALVAF
NWPTANKEGWKKAKGHIGVVKGKSGISGDTTRTLGHKKWVLDVAIPIAWSKFSAQAYETV
REIEIATVMPSGNRELLTPPPQPEKAQEEEEEEESTPRLIDGSSPQEPEFTGVLGPHTNE
EQRVIDEQDKIFASEIRPQQFKGIRDDEDEDDDFPTCLLCTCISTTVYCDDHELDAIPPL
PKNTAYFYSRFNRIKKINKNDFASLSDLKRIDLTSNLISEIDEDAFRKLPQLRELVLRDN
KIRQLPELPTTLTFIDISNNRLGRKGIKQEAFKDMYDLHHLYLTDNNLDHIPLPLPENLR
ALHLQNNNILEMHEDTFCNVKNLTYIRKALEDIRLDGNPINLSKTPQAYMCLPRLPVGSL
V

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_2|1806_bp
atgaagacattagcaggacttgttctgggacttgtcatctttgatgctgctgtgactgcc
ccaactctagagtccatcaactatgactcagaaacctatgatgccaccttagaagacctg
gataatttgtacaactatgaaaacatacctgttgataaagttgagaatatctatgatcca
ttgttttctatattagaagcaagttttagacccaacaatgccatcagagtgctatatatt
acccactatatcgtcatcactaatcagctagagtcaagaataaagaagctgctcctaatg
gcttcagaagaatcatttcctctcattgggcattttaaatatcacttttccatgatgaga
acaagtgaaatctttttagaacacaggtcagcagatgtttatgactccagtccccatgat
ctgggtcgaggtcccagtggggatccatactggggacagcttgctgaccaaacacacaat
ggtccctggaccctgctgatcggaatagttgcactcaccaatgcagcagcagaaacacca
gttttcctcttagaccacaaagaggaccaaggaagctcagcccggaagtataagaaaagc
agaagctggtttcaagcaaaccaacgctctcaactccgaagagtcagggttgttaaagag
ccctttcccagaaagcctgacacccatgtctttagtctggcagccgcactagttgctttt
aactggccaacagcaaataaagaagggtggaaaaaagcaaaaggccatattggtgtggtt
aagggaaagtctgggatttctggggataccacaaggacactgggccacaaaaagtgggtc
ctggatgtcgccatcccaattgcctggagcaaattttcagcccaagcttacgagaccgtc
agagaaattgaaatagccacagtgatgccttcagggaacagagagctcctcactccaccc
ccacagcctgagaaggcccaggaagaggaagaggaggaggaatctactcccaggctgatt
gatggctcttctccccaggagcctgaattcacaggggttctggggccacacacaaatgaa
gaacagagagtaattgatgagcaggataaaatctttgcctctgagattaggccacagcag
ttcaaggggataagagatgatgaggatgaagatgatgactttccaacctgtcttttgtgt
acttgtataagtaccaccgtgtactgtgatgaccatgaacttgatgctattcctccgctg
ccaaagaacaccgcttatttctattcccgctttaacagaattaaaaagatcaacaaaaat
gactttgcaagcctaagtgatttaaaaaggattgatctgacatcaaatttaatatctgag
attgatgaagatgcattccgaaaactgcctcaacttcgagagcttgtcctgcgtgacaac
aaaataaggcagctcccagaattgccaaccactttgacatttattgatattagcaacaat
agacttggaaggaaagggataaagcaagaagcatttaaagacatgtatgatctccatcat
ctgtacctcactgataacaacttggaccacatccctctgccactcccagaaaatctacga
gcccttcacctccagaataacaacattctggaaatgcacgaagatacgttctgcaatgtt
aaaaatttgacttatattcgtaaggcactagaggacattcgattggatggaaaccctatt
aatctcagcaaaactcctcaagcatacatgtgtctacctcgtctgcctgttgggagcctt
gtctaa

>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_3|352_aa
MAGTICFIMWVLFITDTVWSRSVRQVYEVHDSDDWTIHDFECPMECFCPPSFPTALYCEN
RGLKEIPAIPSRIWYLYLQNNLIETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQL
KKLLFLFLEDNELEEVPSPLPRSLEQLQLARNKVSRIPQGTFSNLENLTLLDLQNNKLVD
NAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPANTMQLFLDNNSIEGIPENYFNVIPKVA
FLRLNHNKLSDEGLPSRGFDVSSILDLQLSHNQLTKVPRISAHLQHLHLDHNKIKSVNVS
VICPSPSMLPAERDSFSYGPHLRYLRLDGNEIKPPIPMALMTCFRLLQAVII

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_3|1059_bp
atggcaggcacaatctgtttcatcatgtgggtgttattcataacagacactgtgtggtct
agaagtgtgaggcaggtctatgaagtacatgattcagatgattggactattcatgacttc
gagtgtcccatggaatgtttctgcccacccagttttcctactgctttatattgtgaaaat
agaggtctcaaagaaattcctgctattccttcaagaatttggtatctttatcttcaaaac
aacctgatagaaaccattcctgaaaagccatttgagaatgccacccagctaagatggata
aatctaaacaagaacaaaataaccaactacggaattgaaaaaggagccctaagccagctg
aagaagttgctcttcttatttctggaagataatgagctagaggaggtaccttctccattg
ccaagaagtttagaacaattacaattagctagaaataaggtgtccagaattcctcaaggg
acctttagcaatctggagaacctgacccttcttgacctacagaacaacaaattagtggac
aatgcctttcaaagagacacttttaaaggactcaagaatctcatgcagctaaacatggcc
aagaatgccctgaggaatatgcctccaagattaccagccaatacaatgcagttgttttta
gacaacaattccattgaaggaataccagaaaattattttaatgtgattcctaaagtggcc
tttttgagactaaatcacaacaaactgtcagatgagggtctcccatcaagaggatttgat
gtatcatcaattctagatcttcaactgtcgcacaatcaactcacaaaggttccccgaatc
agtgctcatctgcagcaccttcaccttgatcataacaaaattaaaagtgtgaatgtctct
gtaatatgtcccagcccatccatgctgcctgcagaacgagattccttcagttatggacct
catcttcgctacctccgtctggatggaaatgaaatcaaaccaccaattccaatggcttta
atgacctgcttcagacttctgcaggctgtcattatttaa

>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_4|59_aa
MRSLKKVLDKDESKDEDEEKGQEEKEEEEKGEKEEEKEEEENKNKNTVKKQPSPPKLTL

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_4|180_bp
atgaggtcactgaaaaaggtccttgataaagatgaaagcaaagatgaagatgaggaaaaa
ggacaggaagaaaaggaggaggaggagaagggagagaaagaggaggaaaaggaggaagag
gagaataagaataagaatacagtgaagaagcagccatcaccaccaaaactcacactttag

>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_5|96_aa
MELPVKKGQLLSLRFGRISHPSLLALEIPNGPEKKGSPTKQHSCSTNKQPECFFNWVPDP
VPHYRASIILTPKPGRDTTTTTTTTTTTTKTSGPYP

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_5|291_bp
atggagctcccagtgaagaaggggcagctgctatctctgaggtttggtcgaatcagccat
cccagcctgctagctttggagattccaaatggtccagaaaagaaagggtcccccacaaag
cagcacagctgctctaccaataaacaaccagagtgcttctttaactgggtccctgatcct
gttcctcattacagggccagcatcatcctgacaccaaagcctggcagagatacaacaaca
acaacaacaacaacaacaacaacaacaaaaacttcaggcccatatccctga

>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_6|338_aa
MSLSAFTLFLALIGGTSGQYYDYDFPLSIYGQSSPNCAPECNCPESYPSAMYCDELKLKS
VPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGRVFSKLKQLKK
LHINHNNLTESVGPLPKSLEDLQLTHNKITKLGSFEGLVNLTFIHLQHNRLKEDAVSAAF
KGLKSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKISNIPDEYFKRFNALQYLRLSHNE
LADSGIPGNSFNVSSLVELDLSYNKLKNIPTVNENLENYYLEVNQLEKFDIKSFCKILGP
LSYSKIKHLRLDGNRISETSLPPDMYECLRVANEVTLN

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_6|1017_bp
atgagtctaagtgcatttactctcttcctggcattgattggtggtaccagtggccagtac
tatgattatgattttcccctatcaatttatgggcaatcatcaccaaactgtgcaccagaa
tgtaactgccctgaaagctacccaagtgccatgtactgtgatgagctgaaattgaaaagt
gtaccaatggtgcctcctggaatcaagtatctttaccttaggaataaccagattgaccat
attgatgaaaaggcctttgagaatgtaactgatctgcagtggctcattctagatcacaac
cttctagaaaactccaagataaaagggagagttttctctaaattgaaacaactgaagaag
ctgcatataaaccacaacaacctgacagagtctgtgggcccacttcccaaatctctggag
gatctgcagcttactcataacaagatcacaaagctgggctcttttgaaggattggtaaac
ctgaccttcatccatctccagcacaatcggctgaaagaggatgctgtttcagctgctttt
aaaggtcttaaatcactcgaataccttgacttgagcttcaatcagatagccagactgcct
tctggtctccctgtctctcttctaactctctacttagacaacaataagatcagcaacatc
cctgatgagtatttcaagcgttttaatgcattgcagtatctgcgtttatctcacaacgaa
ctggctgatagtggaatacctggaaattctttcaatgtgtcatccctggttgagctggat
ctgtcctataacaagcttaaaaacataccaactgtcaatgaaaaccttgaaaactattac
ctggaggtcaatcaacttgagaagtttgacataaagagcttctgcaagatcctggggcca
ttatcctactccaagatcaagcatttgcgtttggatggcaatcgcatctcagaaaccagt
cttccaccggatatgtatgaatgtctacgtgttgctaacgaagtcactcttaattaa

>gi568815586r:90951349_91156281|GENSCAN_predicted_peptide_7|192_aa
XLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVG
SSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYNVLVAETQQC
IMPCPLKQMLQQEETFQDMTIKVEECQAELGNKGCEGEGITERLPGRLSTYYDNLGSQCS
YAPDLPVTCQPH

>gi568815586r:90951349_91156281|GENSCAN_predicted_CDS_7|579_bp
nngttgggattgagtttcaacagcatctctgctgttgacaatggctctctggccaacacg
cctcatctgagggagcttcacttggacaacaacaagcttaccagagtacctggtgggctg
gcagagcataagtacatccaggttgtctaccttcataacaacaatatctctgtagttgga
tcaagtgacttctgcccacctggacacaacaccaaaaaggcttcttattcgggtgtgagt
cttttcagcaacccggtccagtactgggagatacagccatccaccttcagatgtgtctac
gtgcgctctgccattcaactcggaaactataatgttctagtggcagagacacagcagtgc
ataatgccttgccctctgaagcagatgttgcagcaggaggagacattccaggacatgaca
attaaagtggaggaatgtcaagcagaactggggaataagggatgtgaaggggagggcatt
actgaaagattacctgggagactatccacatactacgacaaccttggttcacagtgcagt
tatgctcctgatcttcctgtaacttgtcagccccattaa