GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:09:58

Sequence gi568815594r:158609739_158823288 : 213550 bp : 39.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  18904  18971   68  0  2   63   87    37 0.555   1.70
 1.02 Intr +  23667  23738   72  0  0   81   50    91 0.353   2.20
 1.03 Intr +  35171  35400  230  2  2   75   68   131 0.696   6.39
 1.04 Intr +  37332  37463  132  1  0   53   91    44 0.281   0.90
 1.05 Intr +  42019  42168  150  2  0  112   77    27 0.715   3.21
 1.06 Intr +  47631  47813  183  1  0   71   55   100 0.220   3.84
 1.07 Intr +  48532  48685  154  2  1  -10   81   133 0.313   1.01
 1.08 Intr +  48926  49087  162  2  0   46   52   134 0.322   3.77
 1.09 Intr +  50310  50469  160  0  1   34   23   128 0.018  -0.03
 1.10 Intr +  51484  51623  140  0  2   45   68   130 0.226   5.04
 1.11 Intr +  51908  52902  995  2  2   65   69   584 0.376  43.74
 1.12 Intr +  54766  55017  252  2  0   95   -6   235 0.853  11.28
 1.13 Intr +  55136  55318  183  0  0   71   80    88 0.208   5.14
 1.14 Intr +  58222  58272   51  2  0   68   92    49 0.021   1.26
 1.15 Term +  61758  62248  491  1  2   32   47   338 0.014  17.93
 1.16 PlyA +  65309  65314    6                               1.05

 2.00 Prom +  68661  68700   40                              -6.45
 2.01 Init +  72465  72686  222  2  0   85   43   303 0.909  24.10
 2.02 Intr +  74854  74940   87  0  0  107   75    41 0.541   3.95
 2.03 Intr +  80610  80687   78  2  0  100   92    79 0.951   8.33
 2.04 Intr +  83567  83671  105  1  0   86  119   -19 0.580   0.49
 2.05 Intr +  85759  85905  147  0  0   95   53   106 0.994   7.31
 2.06 Intr +  87821  87961  141  1  0  107  103    79 0.994  10.93
 2.07 Intr +  89249  89392  144  1  0   17   93    83 0.693   1.26
 2.08 Intr +  93685  93853  169  0  1   68   82    57 0.818   1.70
 2.09 Intr +  96891  97112  222  1  0   16   90   133 0.900   3.48
 2.10 Term +  98626  98789  164  2  2   75   37   219 0.999  12.62
 2.11 PlyA +  98910  98915    6                               1.05

 3.10 PlyA -  99126  99121    6                               1.05
 3.09 Term - 100086  99998   89  1  2   86   43    66 0.850  -1.26
 3.08 Intr - 100932 100890   43  0  1   65  115    47 0.782   1.99
 3.07 Intr - 103581 103381  201  0  0    9  107   109 0.836   3.46
 3.06 Intr - 105946 105824  123  1  0   12   76   151 0.954   6.16
 3.05 Intr - 107462 107274  189  2  0   70  106   160 0.987  14.86
 3.04 Intr - 109548 109442  107  1  2   82   98    92 0.995   8.61
 3.03 Intr - 111745 111605  141  2  0   83   47   103 0.364   5.10
 3.02 Intr - 113528 113466   63  0  0   18   83   103 0.079   0.57
 3.01 Init - 119499 119361  139  0  1   82   95   102 0.586  10.66
 3.00 Prom - 121200 121161   40                              -4.55

 4.00 Prom + 127022 127061   40                              -5.75
 4.01 Init + 129845 129971  127  1  1   29   35   145 0.522   3.67
 4.02 Intr + 132922 133040  119  2  2   76   37    78 0.005   0.76
 4.03 Intr + 157022 157063   42  1  0   89   96    31 0.000   1.52
 4.04 Intr + 158806 158973  168  0  0   33  -12   217 0.000   5.42
 4.05 Intr + 159445 159581  137  0  2   -1   66   171 0.000   4.45
 4.06 Intr + 186172 186286  115  1  1   46   75   129 0.324   6.93
 4.07 Intr + 192931 193075  145  0  1   60   31   112 0.072   1.63
 4.08 Intr + 196416 196572  157  1  1   49   56   114 0.061   2.45
 4.09 Intr + 201123 201202   80  0  2   48   89    56 0.542  -0.02
 4.10 Intr + 204379 204497  119  2  2  104   54    57 0.241   3.16
 4.11 Term + 209058 209186  129  2  0   90   36    60 0.181  -1.80
 4.12 PlyA + 209543 209548    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  53566  53641   76  0  1  101  100    40 0.823   7.80
S.002 Term -  60030  59875  156  0  0   90   34   172 0.947   8.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:158609739_158823288|GENSCAN_predicted_peptide_1|1140_aa
MRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLYFKKFQYCGYAPH
VRSCKPNTDGISSLENLLASIIQRVFVWVVSAVTCFGNIFVICMRPYIRSENKLYAMSII
SLCLAFIPLSNKEFFKNYYGTNGVCFPLHSEDTESIGAQIYSVAIFLGTITSWVVIFILP
INSALNPILYTLTTRPFKEMIHRFWYNYRQRKSMDSKASVSTLAALEEPFSPPMRSRGPS
LGLAEARAGSLCSQGGVEGEMREGAGAACSACGTSWVLDTPSLRTVTLTASVCDFILEVS
ETKNPPIPDTFWRPRGDYRLSSSGETIVKRVGSIGLPGTSFRFSCTSGLSRASTERKAIQ
LRGADNKLVDPAAMSGTLKGMSPNLPVAPLTINDNPPLISPAQKEISKEISKGPQIPPDH
QLCPLQAVGGGEFGPTWVCLTIEGQEIDFLLDIGMAFSVLISCPGRLSSRSVTIRGILGQ
PVTRQYPLRPEAHKGLQDIIKHLKAQGLLRKCGSPCNTPILGVQKPNGQWRLVQDLRLIN
EAVIPLYPVVPNPYTLLSQITEEAEWFTVLDLKDAFFCIPLHSDSQFLFAFQDPTDHTSQ
LTWTVLPKGFRDSSHLFGQALAQDVGHFSSPGTLVLQYVDDLLLAVSLEASCQQATLDLL
NFLANQGYKVSRSKAQLCLQQVKYLGLILARGTRALSKEQIQPILAYPHPKTLKQLQGFL
GITGFWRLWIPGYSEIAGPLYTIIKETQRANTHLVEWEPGAETAFKTLKQAIVQAPALSL
PTGQNFSLYITERAGIALGVLTQTRGTTPQPVAYLSPVAAMLLLLAFGPCIFNLLVKFVS
SRIEAIKLQMVLQMEPQMSSTNNFYRGPLDRPAGPSTGLKSSPLEDTTAGPLLRPYPAGT
SVSTLDALEEPFSLPLHCGGPSLGLAEAGAGSLCSRGGVEGEAWVGAGAVHGACGPAWVP
VVTSGDSGEGGTGQDQTEGPVVPGHGGWGTDSLASRAPPPPVFPEAPRGDAVPTPHSRLR
SAAPLPPAGPPLGRCSCSELASPNSLGRPGKMLQRRLKRREKREAAGAAKKPATPQGRPW
GRVGTAESDPRSRTDTNCLLTTRAQSRKAPPPNARNPAQSPRGSQPRTTKTFHFSGQPII

>gi568815594r:158609739_158823288|GENSCAN_predicted_CDS_1|3423_bp
atgaggaaaaacaaaattaatcacttaaatgaaaatacttttgcacctctccagaaactg
gatgaattggatttaggaagtaataagattgaaaatcttccaccgcttatattcaaggac
ctgaaggagctgtcacaattatattttaagaaattccagtactgtgggtatgcaccacat
gttcgcagctgtaaaccaaacactgatggaatttcatctctagagaatctcttggcaagc
attattcagagagtatttgtctgggttgtatctgcagttacctgctttggaaacattttt
gtcatttgcatgcgaccttatatcaggtctgagaacaagctgtatgccatgtcaatcatt
tctctctgcttggctttcattccattgagcaataaggaatttttcaaaaactactatggc
accaatggagtatgcttccctcttcattcagaagatacagaaagtattggagcccagatt
tattcagtggcaatttttcttggtaccataacctcttgggtagtgatttttattctgccc
attaacagtgctttgaacccaattctctatactctgaccacaagaccatttaaagaaatg
attcatcggttttggtataactacagacaaagaaaatctatggacagcaaagcctcagtg
tccactctggctgcactggaggagcccttcagcccgccaatgcgcagtaggggcccctct
ctggggctggctgaggccagagctggctccctctgctcgcagggaggtgtggagggagag
atgcgggagggagctggggctgcatgcagtgcttgtgggacgtcgtgggttctggacaca
ccatctttaagaactgtaacactcactgcgagtgtctgcgacttcattcttgaagtcagc
gagacaaagaacccaccaattccggacacattttggcgaccacgaggggactatcgccta
tcgtcaagtggtgagactatcgtcaagcgagttgggagcattggtttgcctggaaccagc
ttccgcttttcctgtacttctgggctgagccgagcatcgacagagaggaaagccattcag
ctccggggtgccgacaacaagttggttgacccagcagccatgagcggaactctcaaaggc
atgtcgcccaacctccctgtagctccccttactattaatgataatcctcctctaatctcc
cctgctcagaaagaaataagcaaagaaatctccaaaggaccacaaatccccccggaccat
cagttatgtccccttcaagctgtagggggaggggaatttggcccaacctgggtatgttta
accattgagggccaggaaattgacttcctcctggacattggcatggccttctcagtgtta
atctcctgtcctggacgactgtcctcaaggtctgttaccatccgaggaatcctgggacag
cctgtaaccaggcaatatcccttaaggcctgaagctcataaaggtttacaggatattatt
aaacatttaaaagctcaaggcttactaaggaaatgtggcagtccctgcaacaccccaatt
ctaggagtacaaaaaccaaacggtcagtggagactagtgcaagatcttagactcatcaat
gaggcagtaattcctctatatccagttgtacccaacccctataccttgctctctcaaata
acagaggaagcagaatggttcactgttctggacctcaaggatgccttcttctgtattccc
ctgcactctgactcccagtttctctttgccttccaggatcccacagaccacacatcccaa
cttacgtggacagtcttgcccaaagggtttagggatagctctcatctatttggtcaggca
ctggcccaagatgtaggtcacttctcaagtccaggcactctggtccttcagtatgtggat
gatttacttttggctgtcagtttggaagcctcatgccagcaggctactctagatctcttg
aactttctagctaatcaagggtacaaggtgtctaggtcgaaggcccagctttgcctacag
caggtcaaatatctgggcctaatcttagccagagggaccagggccctcagcaaggaacaa
atacagcctatactggcttatcctcaccctaagacattaaaacagttgcaggggttcctt
ggaatcaccggcttttggcgactatggatccccggatacagcgagatagctgggcccctc
tatactataatcaaggagacccagagggcaaatactcatctagtagaatgggaaccaggg
gcagaaacagccttcaaaaccttaaagcaggctatagtacaagctccagctttaagcctt
cccacaggacaaaacttttctttatacatcacagagagagcagggatagctcttggagtc
cttactcagactcgtgggacaaccccacaaccagtggcctacctaagtcccgtggcagcc
atgttgctgttactcgcctttggaccctgtatttttaaccttcttgtcaaatttgtttcc
tctagaatcgaggccatcaagctacagatggtcttacaaatggaaccccaaatgagctca
actaacaacttctaccgaggacccctggaccgacctgctggcccttccactggcctaaag
agttcccctctggaggacacaactgcagggccacttcttcgcccctatccagcaggaacc
tcggtgtccactctggatgcactggaggagcccttcagcctgccgctgcactgtgggggc
ccctctctggggctggccgaggccggagccggctccctctgttcacggggaggtgtggag
ggagaggcatgggtgggagctggggctgtgcacggtgcttgcgggccggcgtgggttcca
gtggttacctctggggactctggggagggaggaacgggacaggatcaaacagaagggccg
gtcgtcccgggtcatgggggttgggggaccgattccctagcctcgcgagccccgccgccg
ccggtcttcccagaggcgccgaggggggacgcggtcccgacaccacactcacgtctccga
tctgcagctccacttcctccagctggtccaccgttgggccgctgctcctgctcggaactg
gccagcccaaactcactgggccgcccggggaagatgctgcagaggcgtctgaagaggagg
gagaagagggaggcggcgggggcggcgaagaaacctgcaactcctcagggtcggccatgg
ggaagggttgggaccgcggaatccgacccgagaagccgaaccgacaccaactgtctttta
accactcgcgcccaaagccgaaaggccccgcctcctaacgccagaaatcccgcccagtct
cctcgtgggtctcagccccggaccacaaagacgtttcatttttcgggacagccaatcata
tga

>gi568815594r:158609739_158823288|GENSCAN_predicted_peptide_2|492_aa
MERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDP
GAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGKVLFHDDGSVKGIATNDV
GIQKDGAPKPSLGSYLQYASYHKNSDLDIFKLQRLSNLAGVRHLATFERGLELHAKVTIF
AEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTY
GGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGAR
ALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQ
SKTIGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIP
VNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVV
PEGGGGPAYNGM

>gi568815594r:158609739_158823288|GENSCAN_predicted_CDS_2|1479_bp
atggaaaggtttgcagaagaagcagatgttgtaatagttggtgcaggccctgcagggctc
tctgcagctgttcgtctaaaacagttggctgtggcacatgaaaaggacatccgtgtgtgt
ctagtggagaaagctgcccagataggagctcatactctctcaggggcttgccttgatcca
ggtgcttttaaagaactcttcccagactggaaagagaagggggctccacttaacactcct
gtaacagaagacagatttggaattttaacagagaaatacagaattcctgtgccaattctt
ccaggtaaggtcctttttcatgatgatggtagtgtaaaaggaattgccactaacgatgta
gggatacaaaaggatggtgcaccaaagccttctcttggttcctatctccaatatgcatct
tatcataagaattctgatttggacatttttaagttacagaggttaagtaacttggctggg
gtcagacacctggcaacatttgagagaggactggaactacatgctaaagtcacaattttt
gcagaaggttgccatggacatctagccaagcaactatataagaagtttgatttgagagca
aattgtgaacctcaaacctacgggattggactgaaggagttatgggttattgatgaaaag
aactggaaacctgggagagtagatcacactgttggttggcccttggacagacatacctat
ggaggatctttcctctatcatttgaatgaaggtgaacccctagtagctcttggtcttgtg
gttggtctagactatcagaatccatacctgagtccatttagagagttccaaaggtggaaa
caccatcctagcattcggccaaccttggaaggtggaaaaaggattgcatacggagccaga
gctctcaatgaaggtggctttcagtctataccaaaactcacctttcctggtggtttacta
attggttgtagtcctggttttatgaatgttcccaagatcaaaggtactcacacagcaatg
aaaagtggaattttagcagcagaatctatttttaatcaactaactagtgaaaatctccaa
tcaaagacaataggttctgactttgaacggctcaagccagccaaggattgcacacctatt
gagtatccaaaacccgatggacagatcagttttgacctcttgtcatctgtggctctgagt
ggtactaatcatgaacatgaccagccggcacacttaaccttaagggatgacagtatacct
gtaaatagaaatctgtcgatatatgatgggcccgagcagcgattctgtcctgcaggagtt
tatgaatttgtacctgtggaacaaggtgatggatttcggttacagataaatgctcagaac
tgtgtacattgtaaaacatgtgatattaaagatccaagtcagaatattaactgggtggta
cctgaaggtggaggaggacctgcttacaatggaatgtaa

>gi568815594r:158609739_158823288|GENSCAN_predicted_peptide_3|364_aa
MNLVLFLGPVAFLGQFRNQGTRPSAPGFHKPIYGGLVASQVCDGDHAKPSNPSNPRVFFD
VDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFM
IQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPH
LDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGELKEGDDGGIFPKDGSGDS
HPDFPEDADIDLKDRRVIPVYVVFHTAFINAFCRYVDSSKAVIETADRAKLQPIALSCVL
NIGACKLKMSNWQGAIDSCLEADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAVYA
KMFA

>gi568815594r:158609739_158823288|GENSCAN_predicted_CDS_3|1095_bp
atgaatcttgttctctttctggggcctgttgccttcctgggacagttcaggaatcaagga
acacgtccctctgctcctggatttcacaaacccatctatggaggtttggtggcttcccag
gtatgtgacggggaccatgccaagccctccaaccccagtaaccctcgagtcttctttgac
gtggacatcggaggggagcgagttggtcgaattgtcttagaattgtttgcagatatcgta
cccaaaactgcggaaaattttcgtgcactgtgtacaggagaaaaaggcattggacacacg
actgggaaacctctccatttcaaaggatgcccttttcatcgaattattaagaaatttatg
attcagggtggagacttctcaaatcagaatgggacaggtggagaaagtatttatggtgaa
aaatttgaagatgaaaatttccattacaagcatgatcgggagggtttactgagcatggca
aatgcaggccgcaacacaaacggttctcagttttttatcacaacagttccaactcctcat
ttggatgggaaacatgtggtgtttggccaagtaattaaaggaataggagtggcaaggata
ttggaaaatgtggaagtgaaaggtgaaaaacctgctaaattgtgcgttattgcagaatgt
ggagaattgaaggaaggagatgacgggggaatattcccaaaagatggctctggcgacagt
catccagatttccctgaggatgcggatatagatttaaaagatagaagagtaattcctgtt
tatgtggtctttcatactgcttttattaatgcattctgcagatacgtggacagttcaaag
gctgttattgagacagcagatagagccaagctgcaacctatagctttaagctgtgtactg
aatattggtgcttgtaaactgaagatgtcaaattggcagggagcaattgacagttgttta
gaggctgatcttaagaaagctcaggggatagcaccagaagataaagctatccaggcagaa
ttgctgaaagtcaaacaaaagataaaggcacagaaagataaagagaaggcagtatatgca
aaaatgtttgcttag

>gi568815594r:158609739_158823288|GENSCAN_predicted_peptide_4|445_aa
MIVMSEKVHDCDSASGKGHRLLALIEECEGELLCAEIKSERGGECSFKEGGWERTKPEGA
EEGSGKNSPGRTPNTKAQVENSLRTRTASWYIFQDRPTEAATARTKPSPLAYAFCERALV
PEQSEDPSSGALSLKNKDRPSCMLAVRKNPGSRHGRSCGGGIMAPTLLQKLFNKRGSSGS
SAAASAQGRAPKEGPAFSPWKNCLPRSQSLVLEKVGDRCPKPWLVAVCRLGDCCSKAWEW
AFSQVSNLGLEVGPGSTASEGFGEESGHHRRQCDCLEILATGKRECSSHNKGTSGFVSKS
MFMVRINQKNIKPFRRCAAAQRTPQTSQRAGKTLPDVSAQLCAEAECWLNWSPHPWFSCY
DSCEMEPHSAQAGVQVFTPQKDMQRKVLEGRECYPNLFATGIKPCEVDKADAFWESSALG
LEHSKIIWVEGSRARVRSPVYPGES

>gi568815594r:158609739_158823288|GENSCAN_predicted_CDS_4|1338_bp
atgattgtgatgtctgaaaaagttcatgattgtgattctgcatctggtaagggccacagg
ctgcttgcactcatagaagaatgtgaaggggagctgctgtgtgcagagatcaagagcgaa
agaggaggggaatgtagttttaaagagggtggttgggaaaggacaaaacctgaaggagct
gaggaaggttcagggaagaacagcccaggaagaacaccaaatactaaggcccaagttgag
aacagtctgcgtacaagaacagccagctggtatattttccaagataggcccaccgaagcg
gccaccgcgcgtaccaagccttcccccctagcatacgccttctgtgaacgggctcttgta
cctgaacaaagcgaggacccaagttcaggggctttgtctctaaagaacaaagatcggcct
agctgcatgctcgctgtgcgaaagaacccaggctcccgccacggccggagctgcggcggc
ggcatcatggccccgaccctgctccagaagctcttcaacaaaaggggcagcagcggcagc
tccgcggcggcgtctgcccagggcagggctcctaaggaaggacccgcctttagtccatgg
aaaaattgtcttccacgaagccagtccctggtcctggaaaaggttggggaccgctgccct
aaaccgtggttggtggcagtgtgtagactcggtgactgttgttccaaggcatgggaatgg
gctttttctcaggtgtcaaatcttggattggaggtgggtcctggcagcactgcatccgaa
ggttttggagaggagtctgggcatcacaggagacaatgtgattgtttagagattttggcc
acggggaaaagagaatgttcctcacataacaaaggaacttcaggatttgtctccaagtcc
atgtttatggtcaggataaaccagaagaacattaaaccgttcaggagatgtgcggcggca
cagcgaacaccacaaaccagccagagagctggcaagactctgccagatgtttctgctcag
ctctgtgctgaagcggaatgctggctgaactggtccccacatccctggttctcctgttat
gactcctgtgagatggagcctcactctgcccaagctggagtgcaggtttttacacctcag
aaggacatgcagaggaaggtcctggaaggaagagaatgttatcctaacttgtttgctact
ggtatcaagccttgtgaggtagataaggcagatgcattttgggaaagctcagcgctaggg
ttggagcattctaaaatcatctgggttgaaggcagcagagctagagttagaagccctgtt
taccctggtgaatcctaa